Structural Classification of Proteins
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Family: Guide RNA binding protein gBP

includes PfamB 080318 and PB073991; forms heterooligomers; similar subunit and oligomeric structures to the Plant transcriptional regulator family

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: ssDNA-binding transcriptional regulator domain [54446]
    helix-swapped dimer of beta(4)-alpha motifs
  4. Superfamily: ssDNA-binding transcriptional regulator domain [54447]
    link to SUPERFAMILY database - Superfamily
  5. Family: Guide RNA binding protein gBP [143043]
    includes PfamB 080318 and PB073991; forms heterooligomers; similar subunit and oligomeric structures to the Plant transcriptional regulator family

Protein Domains:

  1. GBP21 [143044]
    Mitochondrial RNA binding protein 1, MRP1
    1. Trypanosoma brucei [TaxId: 5691] [143045] (7)
      SQ P90629 28-173
      1. 2gia picpicxrefxref
        complexed with acy
        1. region b:28-173 [135222] picpiclink
      2. 2gia picpicxrefxref
        automatically matched to 2GIA B:28-173
        complexed with acy
        1. region d:28-173 [135223] picpiclink
      3. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA B:28-173
        1. region b:28-173 [135233] picpiclink
      4. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA B:28-173
        1. region d:28-173 [135234] picpiclink
      5. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA B:28-173
        1. region j:28-173 [135237] picpiclink
      6. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA B:28-173
        1. region k:28-173 [135238] picpiclink
      7. 2gje picpic
        automatically matched to 2GIA B:28-173
        1. region d:28-173 [135282] picpiclink
  2. Guide RNA binding protein gBP25 [143046]
    Mitochondrial RNA-binding protein 2, MRP2
    1. Trypanosoma brucei [TaxId: 5691] [143047] (6)
      SQ Q952G2 56-221
      1. 2gia picpicxrefxref
        complexed with acy
        1. region a:56-221 [135221] picpiclink
      2. 2gia picpicxrefxref
        automatically matched to 2GIA A:56-221
        complexed with acy
        1. region g:56-221 [135224] picpiclink
      3. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA A:56-221
        1. region a:60-221 [135232] picpiclink
      4. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA A:56-221
        1. region g:59-221 [135235] picpiclink
      5. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA A:56-221
        1. region h:59-221 [135236] picpiclink
      6. 2gid picpicxrefxrefxrefxref
        automatically matched to 2GIA A:56-221
        1. region p:59-221 [135239] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk