Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: ParB/Sulfiredoxin

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: ParB/Sulfiredoxin [110848]
    beta*-alpha-beta(2)-alpha-beta-alpha; mixed beta sheet forms a partly open barrel: (n*=4, S*=8)
  4. Superfamily: ParB/Sulfiredoxin [110849]
    link to SUPERFAMILY database - Superfamily

Families:

  1. ParB-like nuclease domain [110850] (1)
    Pfam 02195
    1. Putative partitioning protein ParB/Spo0J [110851]
      1. Thermus thermophilus [TaxId: 274] [110852] (1)
        SQ Q9LCY0 # Fragment
        1. 1vz0 picpicxref
          complexed with co, mg
          1. region a:23-115 [108930] picpiclink
          2. region b:23-115 [108932] picpiclink
          3. region c:23-115 [108934] picpiclink
          4. region d:23-115 [108936] picpiclink
          5. region e:23-115 [108938] picpiclink
          6. region f:23-115 [108940] picpiclink
          7. region g:23-115 [108942] picpiclink
          8. region h:23-115 [108944] picpiclink
  2. Hypothetical protein PF0380 [110853] (1)
    contains insert domain (101-200) of an unusual alpha+beta fold beta-alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel beta-sheet, order 516342; possibly related to Pfam 06245
    1. Hypothetical protein PF0380 [110854]
      1. Pyrococcus furiosus [TaxId: 2261] [110855] (1)
        SQ Q8U3S5
        1. 1vk1 picpic
          complexed with mly, na, peg, po4
          1. chain a [108634] picpiclink
  3. Atu1540-like [160092] (1)
    Pfam 08857; ParBc_2; contains extra C-terminal all-alpha subdomain
    1. Hypothetical protein Atu1540 [160093]
      1. Agrobacterium tumefaciens [TaxId: 358] [160094] (6)
        SQ Q8UF59 4-204
        1. 2hwj picpic
          1. region a:4-204 [147421] picpiclink
        2. 2hwj picpic
          automatically matched to 2HWJ A:4-204
          1. region b:7-204 [147422] picpiclink
        3. 2hwj picpic
          automatically matched to 2HWJ A:4-204
          1. region c:5-204 [147423] picpiclink
        4. 2hwj picpic
          automatically matched to 2HWJ A:4-204
          1. region d:6-204 [147424] picpiclink
        5. 2hwj picpic
          automatically matched to 2HWJ A:4-204
          1. region e:7-204 [147425] picpiclink
        6. 2hwj picpic
          automatically matched to 2HWJ A:4-204
          1. region f:6-204 [147426] picpiclink
  4. Sulfiredoxin-like [160095] (1)
    PfamB 015736
    1. Sulfiredoxin [160096]
      1. Human (Homo sapiens) [TaxId: 9606] [160097] (4)
        SQ Q9BYN0 17-137! SQ Q9BYN0 28-137! SQ Q9BYN0 30-137
        1. 1xw3 picpic
          complexed with mpd, po4
          1. region a:28-137 [145891] picpiclink
        2. 1xw4 picpic
          complexed with adp; mutant
          1. region x:30-137 [145892] picpiclink
        3. 2b6f picpic
          automatically matched to 1YZS A:17-137
          complexed with atp, mg
          1. region a:17-137 [146087] picpiclink
        4. 1yzs picpic
          1. region a:17-137 [145949] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk