Structural Classification of Proteins
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Family: Nsp15 C-terminal domain-like

PfamB 001946

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: EndoU-like [142876]
    comprises several helices and two three-stranded antiparallel beta-sheets; similar architecture to the RNase A-like fold (scop_cf 54075)
  4. Superfamily: EndoU-like [142877]
    similarity to the RNase A-like superfamily (scop_sf 54076) extends to the active site location and architecture; the two structural cores of the RNase A and EndoU superfamilies are interrelated by a topological permutation - transposition of two pereferial beta-strands, suggesting possible distant homology of the two superfamilies (and their unification in a hyperfamily)
    link to SUPERFAMILY database - Superfamily
  5. Family: Nsp15 C-terminal domain-like [142881]
    PfamB 001946

Protein Domains:

  1. Nsp15, C-terminal domain [142882]
    1. SARS coronavirus [TaxId: 227859] [142883] (11)
      SQ Q6VA80 6620-6774
      1. 2h85 picpicxref
        mutant
        1. region a:191-345 [136234] picpiclink
      2. 2rhb picpicxrefxrefxrefxrefxrefxref
        automatically matched to d2h85a2
        mutant
        1. region a:191-344 [152037] picpiclink
      3. 2rhb picpicxrefxrefxrefxrefxrefxref
        automatically matched to d2h85a2
        mutant
        1. region b:191-344 [152039] picpiclink
      4. 2rhb picpicxrefxrefxrefxrefxrefxref
        automatically matched to d2h85a2
        mutant
        1. region c:191-344 [152041] picpiclink
      5. 2rhb picpicxrefxrefxrefxrefxrefxref
        automatically matched to d2h85a2
        mutant
        1. region d:191-344 [152043] picpiclink
      6. 2rhb picpicxrefxrefxrefxrefxrefxref
        automatically matched to d2h85a2
        mutant
        1. region e:191-344 [152045] picpiclink
      7. 2rhb picpicxrefxrefxrefxrefxrefxref
        automatically matched to d2h85a2
        mutant
        1. region f:191-344 [152047] picpiclink
      8. 2ozk picpicxrefxrefxrefxref
        1. region a:191-332 [149108] picpiclink
      9. 2ozk picpicxrefxrefxrefxref
        automatically matched to 2OZK A:191-332
        1. region b:191-332 [149110] picpiclink
      10. 2ozk picpicxrefxrefxrefxref
        automatically matched to 2OZK A:191-332
        1. region c:191-332 [149112] picpiclink
      11. 2ozk picpicxrefxrefxrefxref
        automatically matched to 2OZK A:191-332
        1. region d:191-332 [149114] picpiclink
    2. Murine hepatitis virus, MHV [TaxId: 11138] [142884] (2)
      SQ P16342 6720-6872
      1. 2gti picpicxref
        complexed with gol, so4; mutant
        1. region a:217-369 [135653] picpiclink
      2. 2gth picpicxref
        1. region a:217-369 [135651] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk