Structural Classification of Proteins
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Superfamily: Prion-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Prion-like [54097]
    beta-alpha-beta-alpha(2); antiparallel beta-ribbon
  4. Superfamily: Prion-like [54098]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Prion-like [54099] (14)
    1. Prion protein domain [54100]
      1. Mouse (Mus musculus) [TaxId: 10090] [54101] (3)
        SQ P04925 120-231
        1. 1xyx picpic
          1. chain a [116235] picpiclink
        2. 1y15 picpic
          mutant
          1. chain a [116328] picpiclink
        3. 1ag2 picpic
          1. chain a [37305] picpiclink
      2. Golden hamster (Mesocricetus auratus) [TaxId: 10036] [54102] (1)
        1. 1b10 picpic
          1. chain a [37306] picpiclink
      3. Human (Homo sapiens) [TaxId: 9606] [54103] (18)
        1. 1i4m picpic
          swapped dimer
          complexed with cd, cl
          1. chain a [66025] picpiclink
        2. 1qlx picpic
          1. chain a [37311] picpiclink
        3. 1qlz picpic
          1. chain a [37309] picpiclink
        4. 1e1p picpic
          mutant
          1. chain a [37307] picpiclink
        5. 1e1g picpic
          mutant
          1. chain a [37310] picpiclink
        6. 1e1w picpic
          mutant
          1. chain a [37318] picpiclink
        7. 1e1u picpic
          mutant
          1. chain a [37308] picpiclink
        8. 1qm1 picpic
          1. chain a [37312] picpiclink
        9. 1h0l picpic
          mutant
          1. chain a [76441] picpiclink
        10. 1fo7 picpic
          mutant
          1. chain a [37314] picpiclink
        11. 1qm3 picpic
          1. chain a [37313] picpiclink
        12. 1hjn picpic
          1. chain a [83490] picpiclink
        13. 1qm0 picpic
          1. chain a [37317] picpiclink
        14. 1e1j picpic
          mutant
          1. chain a [37320] picpiclink
        15. 1qm2 picpic
          1. chain a [37315] picpiclink
        16. 1e1s picpic
          mutant
          1. chain a [37316] picpiclink
        17. 1hjm picpic
          1. chain a [83489] picpiclink
        18. 1fkc picpic
          mutant
          1. chain a [37319] picpiclink
      4. Cow (Bos taurus) [TaxId: 9913] [54104] (4)
        1. 1dx1 picpic
          mutant
          1. chain a [37323] picpiclink
        2. 1dwz picpic
          mutant
          1. chain a [37322] picpiclink
        3. 1dwy picpic
          mutant
          1. chain a [37321] picpiclink
        4. 1dx0 picpic
          mutant
          1. chain a [37324] picpiclink
      5. Sheep (Ovis aries) [TaxId: 9940] [102729] (6)
        SQ P23907 124-234 ! SQ P23907 122-234 ! SQ P23907 127-228
        1. 1uw3 picpic
          complexed with gtt, po4
          1. chain a [100070] picpiclink
        2. 1y2s picpic
          1. chain a [116406] picpiclink
        3. 1xyu picpic
          1. chain a [116232] picpiclink
        4. 1tqb picpicxrefxrefxrefxref
          1. chain a [107212] picpiclink
        5. 1tpx picpicxrefxrefxrefxref
          1. chain a [107189] picpiclink
        6. 1tqc picpicxrefxrefxrefxref
          1. chain a [107217] picpiclink
      6. American elk (Cervus elaphus nelsoni) [TaxId: 9864] [117765] (1)
        SQ 67986 124-234
        1. 1xyw picpic
          1. chain a [116234] picpiclink
      7. Chicken (Gallus gallus) [TaxId: 9031] [117766] (1)
        SQ P27177 132-248
        1. 1u3m picpic
          1. chain a [113000] picpiclink
      8. Red-eared slider turtle (Trachemys scripta) [TaxId: 34903] [117767] (1)
        SQ Q9I9C0 141-248
        1. 1u5l picpic
          1. chain a [113042] picpiclink
      9. African clawed frog (Xenopus laevis) [TaxId: 8355] [117768] (1)
        SQ Q5S1W7 43-171
        1. 1xu0 picpic
          1. chain a [116032] picpiclink
      10. Cat (Felis silvestris catus) [TaxId: 9685] [117769] (1)
        SQ O18754 104-214
        1. 1xyj picpic
          1. chain a [116229] picpiclink
      11. Dog (Canis familiaris) [TaxId: 9615] [117770] (1)
        SQ O46501 124-233
        1. 1xyk picpic
          1. chain a [116230] picpiclink
      12. Pig (Sus scrofa) [TaxId: 9823] [117771] (1)
        SQ P49927 125-235
        1. 1xyq picpic
          1. chain a [116231] picpiclink
    2. Prion-like protein Doppel [64207]
      1. Human (Homo sapiens) [TaxId: 9606] [82572] (1)
        1. 1lg4 picpic
          1. chain a [77952] picpiclink
      2. Mouse (Mus musculus) [TaxId: 10090] [64208] (1)
        1. 1i17 picpic
          1. chain a [61519] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk