Structural Classification of Proteins
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Family: Prion-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Prion-like [54097]
    beta-alpha-beta-alpha(2); antiparallel beta-ribbon
  4. Superfamily: Prion-like [54098]
    link to SUPERFAMILY database - Superfamily
  5. Family: Prion-like [54099]

Protein Domains:

  1. Prion protein domain [54100]
    1. Mouse (Mus musculus) [TaxId: 10090] [54101] (3)
      SQ P04925 120-231
      1. 1xyx picpic
        1. chain a [116235] picpiclink
      2. 1y15 picpic
        mutant
        1. chain a [116328] picpiclink
      3. 1ag2 picpic
        1. chain a [37305] picpiclink
    2. Golden hamster (Mesocricetus auratus) [TaxId: 10036] [54102] (1)
      1. 1b10 picpic
        1. chain a [37306] picpiclink
    3. Human (Homo sapiens) [TaxId: 9606] [54103] (18)
      1. 1i4m picpic
        swapped dimer
        complexed with cd, cl
        1. chain a [66025] picpiclink
      2. 1qlx picpic
        1. chain a [37311] picpiclink
      3. 1qlz picpic
        1. chain a [37309] picpiclink
      4. 1e1p picpic
        mutant
        1. chain a [37307] picpiclink
      5. 1e1g picpic
        mutant
        1. chain a [37310] picpiclink
      6. 1e1w picpic
        mutant
        1. chain a [37318] picpiclink
      7. 1e1u picpic
        mutant
        1. chain a [37308] picpiclink
      8. 1qm1 picpic
        1. chain a [37312] picpiclink
      9. 1h0l picpic
        mutant
        1. chain a [76441] picpiclink
      10. 1fo7 picpic
        mutant
        1. chain a [37314] picpiclink
      11. 1qm3 picpic
        1. chain a [37313] picpiclink
      12. 1hjn picpic
        1. chain a [83490] picpiclink
      13. 1qm0 picpic
        1. chain a [37317] picpiclink
      14. 1e1j picpic
        mutant
        1. chain a [37320] picpiclink
      15. 1qm2 picpic
        1. chain a [37315] picpiclink
      16. 1e1s picpic
        mutant
        1. chain a [37316] picpiclink
      17. 1hjm picpic
        1. chain a [83489] picpiclink
      18. 1fkc picpic
        mutant
        1. chain a [37319] picpiclink
    4. Cow (Bos taurus) [TaxId: 9913] [54104] (4)
      1. 1dx1 picpic
        mutant
        1. chain a [37323] picpiclink
      2. 1dwz picpic
        mutant
        1. chain a [37322] picpiclink
      3. 1dwy picpic
        mutant
        1. chain a [37321] picpiclink
      4. 1dx0 picpic
        mutant
        1. chain a [37324] picpiclink
    5. Sheep (Ovis aries) [TaxId: 9940] [102729] (6)
      SQ P23907 124-234 ! SQ P23907 122-234 ! SQ P23907 127-228
      1. 1uw3 picpic
        complexed with gtt, po4
        1. chain a [100070] picpiclink
      2. 1y2s picpic
        1. chain a [116406] picpiclink
      3. 1xyu picpic
        1. chain a [116232] picpiclink
      4. 1tqb picpicxrefxrefxrefxref
        1. chain a [107212] picpiclink
      5. 1tpx picpicxrefxrefxrefxref
        1. chain a [107189] picpiclink
      6. 1tqc picpicxrefxrefxrefxref
        1. chain a [107217] picpiclink
    6. American elk (Cervus elaphus nelsoni) [TaxId: 9864] [117765] (1)
      SQ 67986 124-234
      1. 1xyw picpic
        1. chain a [116234] picpiclink
    7. Chicken (Gallus gallus) [TaxId: 9031] [117766] (1)
      SQ P27177 132-248
      1. 1u3m picpic
        1. chain a [113000] picpiclink
    8. Red-eared slider turtle (Trachemys scripta) [TaxId: 34903] [117767] (1)
      SQ Q9I9C0 141-248
      1. 1u5l picpic
        1. chain a [113042] picpiclink
    9. African clawed frog (Xenopus laevis) [TaxId: 8355] [117768] (1)
      SQ Q5S1W7 43-171
      1. 1xu0 picpic
        1. chain a [116032] picpiclink
    10. Cat (Felis silvestris catus) [TaxId: 9685] [117769] (1)
      SQ O18754 104-214
      1. 1xyj picpic
        1. chain a [116229] picpiclink
    11. Dog (Canis familiaris) [TaxId: 9615] [117770] (1)
      SQ O46501 124-233
      1. 1xyk picpic
        1. chain a [116230] picpiclink
    12. Pig (Sus scrofa) [TaxId: 9823] [117771] (1)
      SQ P49927 125-235
      1. 1xyq picpic
        1. chain a [116231] picpiclink
  2. Prion-like protein Doppel [64207]
    1. Human (Homo sapiens) [TaxId: 9606] [82572] (1)
      1. 1lg4 picpic
        1. chain a [77952] picpiclink
    2. Mouse (Mus musculus) [TaxId: 10090] [64208] (1)
      1. 1i17 picpic
        1. chain a [61519] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk