Structural Classification of Proteins
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Superfamily: FKBP-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FKBP-like [54533]
    core: beta(2)-alpha-beta(2); antiparallel beta-sheet
  4. Superfamily: FKBP-like [54534]
    link to SUPERFAMILY database - Superfamily

Families:

  1. FKBP immunophilin/proline isomerase [54535] (24)
    1. FK-506 binding protein (FKBP12), an immunophilin [54536]
      cis-trans prolyl-isomerase
      1. Human (Homo sapiens) [TaxId: 9606] [54537] (33)
        1. 2ppn picpic
          automatically matched to d1a7xa_
          1. region a:1-107 [149781] picpiclink
        2. 1fkb picpic
          complexed with rap
          1. chain a [38385] picpiclink
        3. 1fkd picpic
          complexed with 818
          1. chain a [38383] picpiclink
        4. 1fkf picpic
          complexed with fk5
          1. chain a [38386] picpiclink
        5. 1fkj picpic
          complexed with fk5
          1. chain a [38384] picpiclink
        6. 1bkf picpic
          complexed with fk5; mutant
          1. chain a [38382] picpiclink
        7. 2fke picpic
          complexed with fk5
          1. chain a [38387] picpiclink
        8. 1d7j picpic
          complexed with buq, nh4, so4
          1. chain a [38389] picpiclink
          2. chain b [38390] picpiclink
        9. 2dg3 picpic
          automatically matched to d1a7xa_
          complexed with gol, rap
          1. region a:1-107 [131499] picpiclink
        10. 1j4i picpic
          complexed with tst
          1. chain a [84115] picpiclink
        11. 1j4h picpic
          complexed with sub
          1. chain a [84114] picpiclink
        12. 1j4r picpic
          complexed with 001, gol, so4
          1. chain a [66389] picpiclink
          2. chain b [66390] picpiclink
          3. chain d [66391] picpiclink
        13. 1fkh picpic
          complexed with sbx
          1. chain a [38388] picpiclink
        14. 1d6o picpic
          complexed with nh4, so4
          1. chain a [38391] picpiclink
          2. chain b [38392] picpiclink
        15. 1bl4 picpic
          complexed with ap1; mutant
          1. chain a [38393] picpiclink
          2. chain b [38394] picpiclink
        16. 1d7i picpic
          complexed with dss, nh4, so4
          1. chain a [38396] picpiclink
          2. chain b [38397] picpiclink
        17. 1d7h picpic
          complexed with dms, nh4, so4
          1. chain a [38398] picpiclink
          2. chain b [38399] picpiclink
        18. 3fap picpicxref
          complexed with ard
          1. chain a [38395] picpiclink
        19. 1fkg picpic
          complexed with sb3
          1. chain a [38400] picpiclink
        20. 1fki picpic
          complexed with sb1
          1. chain a [38401] picpiclink
          2. chain b [38402] picpiclink
        21. 1eym picpic
          mutant
          1. chain a [38403] picpiclink
          2. chain b [38404] picpiclink
        22. 1a7x picpic
          complexed with fka
          1. chain a [38405] picpiclink
          2. chain b [38406] picpiclink
        23. 1nsg picpicxref
          complexed with rpx
          1. chain a [38407] picpiclink
        24. 2fap picpicxref
          complexed with rad
          1. chain a [38408] picpiclink
        25. 4fap picpicxref
          complexed with ard
          1. chain a [38409] picpiclink
        26. 1qpf picpic
          complexed with 858, b7g
          1. chain a [38411] picpiclink
          2. chain d [38412] picpiclink
        27. 1b6c picpicxref
          complexed with so4
          1. chain a [38413] picpiclink
          2. chain c [38414] picpiclink
          3. chain e [38415] picpiclink
          4. chain g [38416] picpiclink
        28. 1qpl picpic
          complexed with 587
          1. chain a [38417] picpiclink
          2. chain c [38418] picpiclink
        29. 1fap picpicxref
          complexed with rap
          1. chain a [38410] picpiclink
        30. 1f40 picpic
          complexed with gpi
          1. chain a [38419] picpiclink
        31. 1fks picpic
          1. chain a [38421] picpiclink
        32. 1fkr picpic
          1. chain a [38422] picpiclink
        33. 1fkt picpic
          1. chain a [38420] picpiclink
      2. Cow (Bos taurus) [TaxId: 9913] [54538] (2)
        1. 1fkl picpic
          complexed with rap
          1. chain a [38423] picpiclink
        2. 1fkk picpic
          complexed with so4
          1. chain a [38424] picpiclink
    2. Calcineurin (FKBP12.6) [54539]
      1. Human (Homo sapiens) [TaxId: 9606] [54540] (1)
        1. 1c9h picpic
          complexed with rap
          1. chain a [38425] picpiclink
      2. Cow (Bos taurus) [TaxId: 9913] [54541] (1)
        1. 1tco picpicxrefxref
          complexed with ca, fe, fk5, myr, po4, zn
          1. chain c [38426] picpiclink
      3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [54542] (1)
        1. 1yat picpic
          complexed with fk5
          1. chain a [38427] picpiclink
    3. FKBP25 [54543]
      1. Human (Homo sapiens) [TaxId: 9606] [54544] (1)
        1. 1pbk picpic
          complexed with rap
          1. chain a [38428] picpiclink
    4. FKB-6, N-terminal domain [102864]
      1. Caenorhabditis elegans [TaxId: 6239] [102865] (1)
        1. 1r9h picpic
          1. chain a [97260] picpiclink
    5. FKBP59-I, N-terminal domain [54545]
      1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [54546] (2)
        1. 1rou picpic
          1. chain a [38430] picpiclink
        2. 1rot picpic
          1. chain a [38429] picpiclink
    6. FKBP52, N-terminal domains [82619]
      1. Human (Homo sapiens) [TaxId: 9606] [82620] (4)
        SQ Q02790 21-427; contains tandem repeat of two FKPB domains
        1. 1q1c picpic
          complexed with dms, edo
          1. region a:21-140 [104474] picpiclink
          2. region a:141-257 [104475] picpiclink
        2. 1n1a picpic
          1. chain a [79797] picpiclink
          2. chain b [79798] picpiclink
        3. 1p5q picpicxref
          second FKPB domain
          complexed with so4
          1. region a:145-257 [104069] picpiclink
          2. region b:145-257 [104071] picpiclink
          3. region c:145-257 [104073] picpiclink
        4. 1qz2 picpicxref
          second FKPB domain
          1. region a:145-257 [104664] picpiclink
          2. region b:145-257 [104666] picpiclink
          3. region c:145-257 [104668] picpiclink
    7. FKBP51, N-terminal domains [82621]
      duplication: tandem repeat of two FKBP domains
      1. Human (Homo sapiens) [TaxId: 9606] [82622] (1)
        1. 1kt0 picpicxref
          complexed with so4; mutant
          1. region a:33-138 [77526] picpiclink
          2. region a:139-253 [77527] picpiclink
      2. Monkey (Saimiri boliviensis) [TaxId: 27679] [82623] (1)
        1. 1kt1 picpicxref
          complexed with so4
          1. region a:28-138 [77529] picpiclink
          2. region a:139-253 [77530] picpiclink
    8. Mitotic rotamase PIN1, domain 2 [54547]
      Domain 1 is a WW-domain
      1. Human (Homo sapiens) [TaxId: 9606] [54548] (7)
        1. 1pin picpicxref
          complexed with 1pg, so4
          1. region a:45-163 [38431] picpiclink
        2. 2itk picpicxref
          complexed with cpi, d11, nal, nh2, pe4; mutant
          1. region a:51-163 [137643] picpiclink
        3. 2f21 picpicxref
          automatically matched to d1nmva2
          complexed with 1pe; mutant
          1. region a:49-163 [132794] picpiclink
        4. 2q5a picpicxref
          complexed with 16p, cpi, nal, nh2; mutant
          1. region a:51-163 [139883] picpiclink
        5. 1f8a picpicxref
          1. region b:55-167 [38432] picpiclink
        6. 1nmv picpicxref
          1. region a:45-163 [91994] picpiclink
        7. 1nmw picpic
          PPI domain only
          complexed with so4
          1. chain a [85881] picpiclink
      2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [75386] (1)
        1. 1j6y picpic
          1. chain a [71600] picpiclink
    9. Parvulin [64248]
      1. Human (Homo sapiens), hpar14 [TaxId: 9606] [64249] (2)
        1. 1eq3 picpic
          1. chain a [59486] picpiclink
        2. 1fjd picpic
          mutant
          1. chain a [59851] picpiclink
    10. Parvulin 10 (rotamase C) [89877]
      1. Escherichia coli [TaxId: 562] [89878] (2)
        1. 1jns picpic
          1. chain a [84185] picpiclink
        2. 1jnt picpic
          1. chain a [84186] picpiclink
    11. Archaeal FKBP [89879]
      contains insert all-beta subdomain; dual function: PPI and chaperone-like activities
      1. Archaeon Methanococcus thermolithotrophicus [TaxId: 2186] [89880] (1)
        1. 1ix5 picpic
          mutant
          1. chain a [83763] picpiclink
    12. Macrophage infectivity potentiator protein (MIP) [64250]
      contains all-alpha dimerisation subdomain in the N-terminal extension
      1. Legionella pneumophila [TaxId: 446] [64251] (1)
        1. 1fd9 picpic
          complexed with zn
          1. chain a [59771] picpiclink
      2. Trypanosoma cruzi [TaxId: 5693] [75387] (1)
        1. 1jvw picpic
          1. chain a [71907] picpiclink
    13. Peptidyl-prolyl cis-trans isomerase FkpA [102866]
      similar to MIP; contains all-alpha dimerisation subdomain in the N-terminal extension
      1. Escherichia coli [TaxId: 562] [102867] (3)
        1. 1q6h picpic
          1. chain a [95975] picpiclink
          2. chain b [95976] picpiclink
        2. 1q6i picpic
          complexed with fk5
          1. chain a [95977] picpiclink
          2. chain b [95978] picpiclink
        3. 1q6u picpic
          complexed with cs
          1. chain a [95998] picpiclink
    14. Trigger factor PPIase domain [75388]
      1. Mycoplasma genitalium [TaxId: 2097] [75389] (1)
        1. 1hxv picpic
          1. chain a [71089] picpiclink
      2. Escherichia coli [TaxId: 562] [89881] (3)
        SQ P22257
        1. 1w26 picpicxrefxref
          1. region a:132-247 [109087] picpiclink
          2. region b:132-247 [109090] picpiclink
        2. 1l1p picpic
          1. chain a [84518] picpiclink
        3. 2vrh picpicxrefxrefxrefxrefxref
          automatically matched to d1w26a3
          1. region a:132-247 [153508] picpiclink
      3. Vibrio cholerae [TaxId: 666] [110869] (1)
        SQ Q9KQS5
        1. 1t11 picpicxrefxref
          1. region a:135-247 [106238] picpiclink
          2. region b:135-247 [106241] picpiclink
    15. Porin chaperone SurA, PPIase domains [82624]
      1. Escherichia coli [TaxId: 562] [82625] (8)
        1. 2pv2 picpic
          automatically matched to d1m5ya2
          1. region a:172-274 [149878] picpiclink
        2. 2pv2 picpic
          automatically matched to d1m5ya2
          1. region b:172-274 [149879] picpiclink
        3. 2pv2 picpic
          automatically matched to d1m5ya2
          1. region c:172-274 [149880] picpiclink
        4. 2pv2 picpic
          automatically matched to d1m5ya2
          1. region d:172-274 [149881] picpiclink
        5. 2pv1 picpic
          automatically matched to d1m5ya2
          1. region a:172-274 [149877] picpiclink
        6. 1m5y picpicxref
          1. region a:172-278 [78665] picpiclink
          2. region a:279-386 [78666] picpiclink
          3. region b:172-274 [78668] picpiclink
          4. region b:283-385 [78669] picpiclink
          5. region c:172-273 [78671] picpiclink
          6. region c:283-385 [78672] picpiclink
          7. region d:172-278 [78674] picpiclink
          8. region d:279-388 [78675] picpiclink
        7. 2pv3 picpicxrefxref
          automatically matched to d1m5ya2
          1. region a:172-273 [149883] picpiclink
        8. 2pv3 picpicxrefxref
          automatically matched to d1m5ya2
          1. region b:172-273 [149885] picpiclink
    16. FKBP13 [110870]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [110871] (6)
        SQ Q9SCY2 84-208
        1. 1u79 picpic
          1. chain a [107714] picpiclink
          2. chain b [107715] picpiclink
          3. chain c [107716] picpiclink
          4. chain d [107717] picpiclink
          5. chain e [107718] picpiclink
        2. 1y0o picpic
          automatically matched to d1u79a_
          1. region a:5-129 [122502] picpiclink
        3. 1y0o picpic
          automatically matched to d1u79a_
          1. region b:205-329 [122503] picpiclink
        4. 1y0o picpic
          automatically matched to d1u79a_
          1. region c:405-529 [122504] picpiclink
        5. 1y0o picpic
          automatically matched to d1u79a_
          1. region d:605-729 [122505] picpiclink
        6. 1y0o picpic
          automatically matched to d1u79a_
          1. region e:805-929 [122506] picpiclink
  2. GreA transcript cleavage factor, C-terminal domain [54549] (3)
    1. GreA transcript cleavage factor, C-terminal domain [54550]
      N-terminal domain is a long alpha-hairpin
      1. Escherichia coli [TaxId: 562] [54551] (1)
        1. 1grj picpicxref
          1. region a:80-158 [38433] picpiclink
      2. Thermus aquaticus [TaxId: 271] [143117] (3)
        SQ Q8VQD7 78-156
        1. 2etn picpicxrefxrefxref
          1. region a:78-156 [132366] picpiclink
        2. 2etn picpicxrefxrefxref
          automatically matched to 2ETN A:78-156
          1. region b:78-156 [132368] picpiclink
        3. 2etn picpicxrefxrefxref
          automatically matched to 2ETN A:78-156
          1. region c:78-156 [132370] picpiclink
      3. Thermus thermophilus [TaxId: 274] [143118] (6)
        SQ Q5SJG6 78-156! SQ Q72JT8 78-156
        1. 2f23 picpicxrefxref
          1. region a:78-156 [132798] picpiclink
        2. 2f23 picpicxrefxref
          automatically matched to 2F23 A:78-156
          1. region b:78-156 [132800] picpiclink
        3. 2eul picpicxrefxrefxrefxref
          complexed with zn
          1. region a:78-156 [132393] picpiclink
        4. 2eul picpicxrefxrefxrefxref
          automatically matched to 2EUL A:78-156
          complexed with zn
          1. region b:78-156 [132395] picpiclink
        5. 2eul picpicxrefxrefxrefxref
          automatically matched to 2EUL A:78-156
          complexed with zn
          1. region c:78-156 [132397] picpiclink
        6. 2eul picpicxrefxrefxrefxref
          automatically matched to 2EUL A:78-156
          complexed with zn
          1. region d:78-156 [132399] picpiclink
  3. 3-mercaptopyruvate sulfurtransferase, C-terminal domain [102868] (1)
    1. 3-mercaptopyruvate sulfurtransferase, C-terminal domain [102869]
      1. Leishmania major [TaxId: 5664] [102870] (1)
        1. 1okg picpicxref
          complexed with ca, csr, so3; mutant
          1. region a:302-373 [93252] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk