Superfamily: FKBP-like

uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: FKBP-like [54533]
   core: beta(2)-alpha-beta(2); antiparallel beta-sheet
4. Superfamily: FKBP-like [54534]
   uperfamily

Families:

1. FKBP immunophilin/proline isomerase [54535] (24)
   1. FK-506 binding protein (FKBP12), an immunophilin [54536]
      cis-trans prolyl-isomerase
      1. Human (Homo sapiens) [TaxId: 9606] [54537] (33)
      2. Cow (Bos taurus) [TaxId: 9913] [54538] (2)
   2. Calcineurin (FKBP12.6) [54539]
      1. Human (Homo sapiens) [TaxId: 9606] [54540] (1)
      2. Cow (Bos taurus) [TaxId: 9913] [54541] (1)
      3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [54542] (1)
   3. FKBP25 [54543]
      1. Human (Homo sapiens) [TaxId: 9606] [54544] (1)
   4. FKB-6, N-terminal domain [102864]
      1. Caenorhabditis elegans [TaxId: 6239] [102865] (1)
   5. FKBP59-I, N-terminal domain [54545]
      1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [54546] (2)
   6. FKBP52, N-terminal domains [82619]
      1. Human (Homo sapiens) [TaxId: 9606] [82620] (4)
         SQ Q02790 21-427; contains tandem repeat of two FKPB domains
   7. FKBP51, N-terminal domains [82621]
      duplication: tandem repeat of two FKBP domains
      1. Human (Homo sapiens) [TaxId: 9606] [82622] (1)
      2. Monkey (Saimiri boliviensis) [TaxId: 27679] [82623] (1)
   8. Mitotic rotamase PIN1, domain 2 [54547]
      Domain 1 is a WW-domain
      1. Human (Homo sapiens) [TaxId: 9606] [54548] (7)
      2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [75386] (1)
   9. Parvulin [64248]
      1. Human (Homo sapiens), hpar14 [TaxId: 9606] [64249] (2)
   10. Parvulin 10 (rotamase C) [89877]
       1. Escherichia coli [TaxId: 562] [89878] (2)
   11. Archaeal FKBP [89879]
       contains insert all-beta subdomain; dual function: PPI and chaperone-like activities
       1. Archaeon Methanococcus thermolithotrophicus [TaxId: 2186] [89880] (1)
   12. Macrophage infectivity potentiator protein (MIP) [64250]
       contains all-alpha dimerisation subdomain in the N-terminal extension
       1. Legionella pneumophila [TaxId: 446] [64251] (1)
       2. Trypanosoma cruzi [TaxId: 5693] [75387] (1)
   13. Peptidyl-prolyl cis-trans isomerase FkpA [102866]
       similar to MIP; contains all-alpha dimerisation subdomain in the N-terminal extension
       1. Escherichia coli [TaxId: 562] [102867] (3)
   14. Trigger factor PPIase domain [75388]
       1. Mycoplasma genitalium [TaxId: 2097] [75389] (1)
       2. Escherichia coli [TaxId: 562] [89881] (3)
          SQ P22257
       3. Vibrio cholerae [TaxId: 666] [110869] (1)
          SQ Q9KQS5
   15. Porin chaperone SurA, PPIase domains [82624]
       1. Escherichia coli [TaxId: 562] [82625] (8)
   16. FKBP13 [110870]
       1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [110871] (6)
          SQ Q9SCY2 84-208
2. GreA transcript cleavage factor, C-terminal domain [54549] (3)
   1. GreA transcript cleavage factor, C-terminal domain [54550]
      N-terminal domain is a long alpha-hairpin
      1. Escherichia coli [TaxId: 562] [54551] (1)
      2. Thermus aquaticus [TaxId: 271] [143117] (3)
         SQ Q8VQD7 78-156
      3. Thermus thermophilus [TaxId: 274] [143118] (6)
         SQ Q5SJG6 78-156! SQ Q72JT8 78-156
3. 3-mercaptopyruvate sulfurtransferase, C-terminal domain [102868] (1)
   1. 3-mercaptopyruvate sulfurtransferase, C-terminal domain [102869]
      1. Leishmania major [TaxId: 5664] [102870] (1)

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk