Structural Classification of Proteins
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Family: FKBP immunophilin/proline isomerase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: FKBP-like [54533]
    core: beta(2)-alpha-beta(2); antiparallel beta-sheet
  4. Superfamily: FKBP-like [54534]
    link to SUPERFAMILY database - Superfamily
  5. Family: FKBP immunophilin/proline isomerase [54535]

Protein Domains:

  1. FK-506 binding protein (FKBP12), an immunophilin [54536]
    cis-trans prolyl-isomerase
    1. Human (Homo sapiens) [TaxId: 9606] [54537] (33)
      1. 2ppn picpic
        automatically matched to d1a7xa_
        1. region a:1-107 [149781] picpiclink
      2. 1fkb picpic
        complexed with rap
        1. chain a [38385] picpiclink
      3. 1fkd picpic
        complexed with 818
        1. chain a [38383] picpiclink
      4. 1fkf picpic
        complexed with fk5
        1. chain a [38386] picpiclink
      5. 1fkj picpic
        complexed with fk5
        1. chain a [38384] picpiclink
      6. 1bkf picpic
        complexed with fk5; mutant
        1. chain a [38382] picpiclink
      7. 2fke picpic
        complexed with fk5
        1. chain a [38387] picpiclink
      8. 1d7j picpic
        complexed with buq, nh4, so4
        1. chain a [38389] picpiclink
        2. chain b [38390] picpiclink
      9. 2dg3 picpic
        automatically matched to d1a7xa_
        complexed with gol, rap
        1. region a:1-107 [131499] picpiclink
      10. 1j4i picpic
        complexed with tst
        1. chain a [84115] picpiclink
      11. 1j4h picpic
        complexed with sub
        1. chain a [84114] picpiclink
      12. 1j4r picpic
        complexed with 001, gol, so4
        1. chain a [66389] picpiclink
        2. chain b [66390] picpiclink
        3. chain d [66391] picpiclink
      13. 1fkh picpic
        complexed with sbx
        1. chain a [38388] picpiclink
      14. 1d6o picpic
        complexed with nh4, so4
        1. chain a [38391] picpiclink
        2. chain b [38392] picpiclink
      15. 1bl4 picpic
        complexed with ap1; mutant
        1. chain a [38393] picpiclink
        2. chain b [38394] picpiclink
      16. 1d7i picpic
        complexed with dss, nh4, so4
        1. chain a [38396] picpiclink
        2. chain b [38397] picpiclink
      17. 1d7h picpic
        complexed with dms, nh4, so4
        1. chain a [38398] picpiclink
        2. chain b [38399] picpiclink
      18. 3fap picpicxref
        complexed with ard
        1. chain a [38395] picpiclink
      19. 1fkg picpic
        complexed with sb3
        1. chain a [38400] picpiclink
      20. 1fki picpic
        complexed with sb1
        1. chain a [38401] picpiclink
        2. chain b [38402] picpiclink
      21. 1eym picpic
        mutant
        1. chain a [38403] picpiclink
        2. chain b [38404] picpiclink
      22. 1a7x picpic
        complexed with fka
        1. chain a [38405] picpiclink
        2. chain b [38406] picpiclink
      23. 1nsg picpicxref
        complexed with rpx
        1. chain a [38407] picpiclink
      24. 2fap picpicxref
        complexed with rad
        1. chain a [38408] picpiclink
      25. 4fap picpicxref
        complexed with ard
        1. chain a [38409] picpiclink
      26. 1qpf picpic
        complexed with 858, b7g
        1. chain a [38411] picpiclink
        2. chain d [38412] picpiclink
      27. 1b6c picpicxref
        complexed with so4
        1. chain a [38413] picpiclink
        2. chain c [38414] picpiclink
        3. chain e [38415] picpiclink
        4. chain g [38416] picpiclink
      28. 1qpl picpic
        complexed with 587
        1. chain a [38417] picpiclink
        2. chain c [38418] picpiclink
      29. 1fap picpicxref
        complexed with rap
        1. chain a [38410] picpiclink
      30. 1f40 picpic
        complexed with gpi
        1. chain a [38419] picpiclink
      31. 1fks picpic
        1. chain a [38421] picpiclink
      32. 1fkr picpic
        1. chain a [38422] picpiclink
      33. 1fkt picpic
        1. chain a [38420] picpiclink
    2. Cow (Bos taurus) [TaxId: 9913] [54538] (2)
      1. 1fkl picpic
        complexed with rap
        1. chain a [38423] picpiclink
      2. 1fkk picpic
        complexed with so4
        1. chain a [38424] picpiclink
  2. Calcineurin (FKBP12.6) [54539]
    1. Human (Homo sapiens) [TaxId: 9606] [54540] (1)
      1. 1c9h picpic
        complexed with rap
        1. chain a [38425] picpiclink
    2. Cow (Bos taurus) [TaxId: 9913] [54541] (1)
      1. 1tco picpicxrefxref
        complexed with ca, fe, fk5, myr, po4, zn
        1. chain c [38426] picpiclink
    3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [54542] (1)
      1. 1yat picpic
        complexed with fk5
        1. chain a [38427] picpiclink
  3. FKBP25 [54543]
    1. Human (Homo sapiens) [TaxId: 9606] [54544] (1)
      1. 1pbk picpic
        complexed with rap
        1. chain a [38428] picpiclink
  4. FKB-6, N-terminal domain [102864]
    1. Caenorhabditis elegans [TaxId: 6239] [102865] (1)
      1. 1r9h picpic
        1. chain a [97260] picpiclink
  5. FKBP59-I, N-terminal domain [54545]
    1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [54546] (2)
      1. 1rou picpic
        1. chain a [38430] picpiclink
      2. 1rot picpic
        1. chain a [38429] picpiclink
  6. FKBP52, N-terminal domains [82619]
    1. Human (Homo sapiens) [TaxId: 9606] [82620] (4)
      SQ Q02790 21-427; contains tandem repeat of two FKPB domains
      1. 1q1c picpic
        complexed with dms, edo
        1. region a:21-140 [104474] picpiclink
        2. region a:141-257 [104475] picpiclink
      2. 1n1a picpic
        1. chain a [79797] picpiclink
        2. chain b [79798] picpiclink
      3. 1p5q picpicxref
        second FKPB domain
        complexed with so4
        1. region a:145-257 [104069] picpiclink
        2. region b:145-257 [104071] picpiclink
        3. region c:145-257 [104073] picpiclink
      4. 1qz2 picpicxref
        second FKPB domain
        1. region a:145-257 [104664] picpiclink
        2. region b:145-257 [104666] picpiclink
        3. region c:145-257 [104668] picpiclink
  7. FKBP51, N-terminal domains [82621]
    duplication: tandem repeat of two FKBP domains
    1. Human (Homo sapiens) [TaxId: 9606] [82622] (1)
      1. 1kt0 picpicxref
        complexed with so4; mutant
        1. region a:33-138 [77526] picpiclink
        2. region a:139-253 [77527] picpiclink
    2. Monkey (Saimiri boliviensis) [TaxId: 27679] [82623] (1)
      1. 1kt1 picpicxref
        complexed with so4
        1. region a:28-138 [77529] picpiclink
        2. region a:139-253 [77530] picpiclink
  8. Mitotic rotamase PIN1, domain 2 [54547]
    Domain 1 is a WW-domain
    1. Human (Homo sapiens) [TaxId: 9606] [54548] (7)
      1. 1pin picpicxref
        complexed with 1pg, so4
        1. region a:45-163 [38431] picpiclink
      2. 2itk picpicxref
        complexed with cpi, d11, nal, nh2, pe4; mutant
        1. region a:51-163 [137643] picpiclink
      3. 2f21 picpicxref
        automatically matched to d1nmva2
        complexed with 1pe; mutant
        1. region a:49-163 [132794] picpiclink
      4. 2q5a picpicxref
        complexed with 16p, cpi, nal, nh2; mutant
        1. region a:51-163 [139883] picpiclink
      5. 1f8a picpicxref
        1. region b:55-167 [38432] picpiclink
      6. 1nmv picpicxref
        1. region a:45-163 [91994] picpiclink
      7. 1nmw picpic
        PPI domain only
        complexed with so4
        1. chain a [85881] picpiclink
    2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [75386] (1)
      1. 1j6y picpic
        1. chain a [71600] picpiclink
  9. Parvulin [64248]
    1. Human (Homo sapiens), hpar14 [TaxId: 9606] [64249] (2)
      1. 1eq3 picpic
        1. chain a [59486] picpiclink
      2. 1fjd picpic
        mutant
        1. chain a [59851] picpiclink
  10. Parvulin 10 (rotamase C) [89877]
    1. Escherichia coli [TaxId: 562] [89878] (2)
      1. 1jns picpic
        1. chain a [84185] picpiclink
      2. 1jnt picpic
        1. chain a [84186] picpiclink
  11. Archaeal FKBP [89879]
    contains insert all-beta subdomain; dual function: PPI and chaperone-like activities
    1. Archaeon Methanococcus thermolithotrophicus [TaxId: 2186] [89880] (1)
      1. 1ix5 picpic
        mutant
        1. chain a [83763] picpiclink
  12. Macrophage infectivity potentiator protein (MIP) [64250]
    contains all-alpha dimerisation subdomain in the N-terminal extension
    1. Legionella pneumophila [TaxId: 446] [64251] (1)
      1. 1fd9 picpic
        complexed with zn
        1. chain a [59771] picpiclink
    2. Trypanosoma cruzi [TaxId: 5693] [75387] (1)
      1. 1jvw picpic
        1. chain a [71907] picpiclink
  13. Peptidyl-prolyl cis-trans isomerase FkpA [102866]
    similar to MIP; contains all-alpha dimerisation subdomain in the N-terminal extension
    1. Escherichia coli [TaxId: 562] [102867] (3)
      1. 1q6h picpic
        1. chain a [95975] picpiclink
        2. chain b [95976] picpiclink
      2. 1q6i picpic
        complexed with fk5
        1. chain a [95977] picpiclink
        2. chain b [95978] picpiclink
      3. 1q6u picpic
        complexed with cs
        1. chain a [95998] picpiclink
  14. Trigger factor PPIase domain [75388]
    1. Mycoplasma genitalium [TaxId: 2097] [75389] (1)
      1. 1hxv picpic
        1. chain a [71089] picpiclink
    2. Escherichia coli [TaxId: 562] [89881] (3)
      SQ P22257
      1. 1w26 picpicxrefxref
        1. region a:132-247 [109087] picpiclink
        2. region b:132-247 [109090] picpiclink
      2. 1l1p picpic
        1. chain a [84518] picpiclink
      3. 2vrh picpicxrefxrefxrefxrefxref
        automatically matched to d1w26a3
        1. region a:132-247 [153508] picpiclink
    3. Vibrio cholerae [TaxId: 666] [110869] (1)
      SQ Q9KQS5
      1. 1t11 picpicxrefxref
        1. region a:135-247 [106238] picpiclink
        2. region b:135-247 [106241] picpiclink
  15. Porin chaperone SurA, PPIase domains [82624]
    1. Escherichia coli [TaxId: 562] [82625] (8)
      1. 2pv2 picpic
        automatically matched to d1m5ya2
        1. region a:172-274 [149878] picpiclink
      2. 2pv2 picpic
        automatically matched to d1m5ya2
        1. region b:172-274 [149879] picpiclink
      3. 2pv2 picpic
        automatically matched to d1m5ya2
        1. region c:172-274 [149880] picpiclink
      4. 2pv2 picpic
        automatically matched to d1m5ya2
        1. region d:172-274 [149881] picpiclink
      5. 2pv1 picpic
        automatically matched to d1m5ya2
        1. region a:172-274 [149877] picpiclink
      6. 1m5y picpicxref
        1. region a:172-278 [78665] picpiclink
        2. region a:279-386 [78666] picpiclink
        3. region b:172-274 [78668] picpiclink
        4. region b:283-385 [78669] picpiclink
        5. region c:172-273 [78671] picpiclink
        6. region c:283-385 [78672] picpiclink
        7. region d:172-278 [78674] picpiclink
        8. region d:279-388 [78675] picpiclink
      7. 2pv3 picpicxrefxref
        automatically matched to d1m5ya2
        1. region a:172-273 [149883] picpiclink
      8. 2pv3 picpicxrefxref
        automatically matched to d1m5ya2
        1. region b:172-273 [149885] picpiclink
  16. FKBP13 [110870]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [110871] (6)
      SQ Q9SCY2 84-208
      1. 1u79 picpic
        1. chain a [107714] picpiclink
        2. chain b [107715] picpiclink
        3. chain c [107716] picpiclink
        4. chain d [107717] picpiclink
        5. chain e [107718] picpiclink
      2. 1y0o picpic
        automatically matched to d1u79a_
        1. region a:5-129 [122502] picpiclink
      3. 1y0o picpic
        automatically matched to d1u79a_
        1. region b:205-329 [122503] picpiclink
      4. 1y0o picpic
        automatically matched to d1u79a_
        1. region c:405-529 [122504] picpiclink
      5. 1y0o picpic
        automatically matched to d1u79a_
        1. region d:605-729 [122505] picpiclink
      6. 1y0o picpic
        automatically matched to d1u79a_
        1. region e:805-929 [122506] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk