Superfamily: YefM-like

uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: YefM-like [143119]
   core: beta-alpha(2)-beta(2)-alpha; mixed beta-sheet, order:123, strands 1 and 2 are parallel; forms compact dimer with a single beta-sheet;
4. Superfamily: YefM-like [143120]
   uperfamily

Families:

1. YefM-like [143121] (2)
   antitoxin component of the YefM/YoeB-like system; binds to the toxin component wia extra C-terminal tail, unstructured in the free state, but adopting a RelB-like conformation in the bound state
   1. Antitoxin YefM [143122]
      1. Escherichia coli [TaxId: 562] [143123] (4)
         SQ P69346 1-55! SQ P69346 1-83
         1. 2a6q
            1. region a:10-92 [126293]
         2. 2a6q
            1. region b:10-64 [126294]
         3. 2a6q
            automatically matched to 2A6Q A:10-92
            1. region c:10-92 [126295]
         4. 2a6q
            automatically matched to 2A6Q B:10-64
            1. region d:10-64 [126296]
   2. Hypothetical protein NE2111 [143124]
      1. Nitrosomonas europaea [TaxId: 915] [143125] (4)
         SQ Q82T22 1-51
         1. 2odk
            complexed with gol, so4
            1. region a:1-51 [139030]
         2. 2odk
            automatically matched to 2ODK A:1-51
            complexed with gol, so4
            1. region b:2-51 [139031]
         3. 2odk
            automatically matched to 2ODK A:1-51
            complexed with gol, so4
            1. region c:1-51 [139032]
         4. 2odk
            automatically matched to 2ODK A:1-51
            complexed with gol, so4
            1. region d:1-51 [139033]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk