Structural Classification of Proteins
Fold: beta and beta-prime subunits of DNA dependent RNA-polymerase
Multidomain subunits of complex domain organization
Lineage:
Root:
scop
Class:
Multi-domain proteins (alpha and beta)
[56572]
Folds consisting of two or more domains belonging to different classes
Fold:
beta and beta-prime subunits of DNA dependent RNA-polymerase
[64483]
Multidomain subunits of complex domain organization
Superfamilies:
beta and beta-prime subunits of DNA dependent RNA-polymerase
[64484] (2)
The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit
uperfamily
RNA-polymerase beta
[64485] (3)
RBP2 [64491]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[64492] (30)
SQ
P08518
; part of multichain biological unit
1twf
complexed with mn, utp, zn
chain b
[112726]
1i50
complexed with mn, zn
chain b
[61755]
1k83
complexed with ilx, mn, trx, zn
chain b
[68276]
3cqz
automatically matched to d1i50b_
complexed with ilx, trx, zn
region b:20-1222
[156930]
1i3q
complexed with mg, zn
chain b
[61608]
2nvq
automatically matched to d1i50b_
complexed with dut, mg, zn
region b:20-1224
[138635]
1twc
complexed with gtp, mn, zn
chain b
[112712]
1twa
complexed with atp, mn, zn
chain b
[112697]
1i6h
complexed with mg, zn
chain b
[61832]
1twh
complexed with atp, mn, zn
chain b
[112752]
2r7z
automatically matched to d1i50b_
complexed with cpt, mg, zn
region b:20-1224
[151659]
2r92
automatically matched to d1i50b_
complexed with mg, zn
region b:20-1224
[151746]
1twg
complexed with ctp, mn, zn
chain b
[112739]
2nvy
automatically matched to d1i50b_
complexed with mn, zn
region b:20-1224
[138681]
2r93
automatically matched to d1i50b_
complexed with mg, zn
region b:20-1224
[151755]
2e2i
automatically matched to d1i50b_
complexed with dgt, mg, zn
region b:20-1224
[131995]
2vum
automatically matched to d1i50b_
complexed with bru, ilx, mg, trx, zn
region b:20-1224
[153549]
2e2j
automatically matched to d1i50b_
complexed with g2p, mg, zn
region b:20-1222
[132008]
2b63
automatically matched to d1i50b_
complexed with 5bu, mg, zn
region b:20-1224
[127918]
2ja7
automatically matched to d1i50b_
complexed with bru, mg, tt, zn
region b:20-1224
[138191]
2ja7
automatically matched to d1i50b_
complexed with bru, mg, tt, zn
region n:20-1224
[138207]
2nvx
automatically matched to d1i50b_
complexed with dut, mg, zn
region b:20-1222
[138668]
2nvt
automatically matched to d1i50b_
complexed with g2p, mg, zn
region b:20-1224
[138648]
2ja5
automatically matched to d1i50b_
complexed with bru, mg, zn
region b:20-1224
[138159]
2ja8
automatically matched to d1i50b_
complexed with bru, mg, tt, zn
region b:20-1224
[138223]
2b8k
automatically matched to d1i50b_
complexed with zn
region b:20-1224
[128077]
2ja6
automatically matched to d1i50b_
complexed with bru, mg, tt, zn
region b:20-1224
[138175]
2yu9
automatically matched to d1i50b_
complexed with mg, utp, zn
region b:20-1224
[140065]
2e2h
automatically matched to d1i50b_
complexed with gtp, mg, zn
region b:20-1223
[131982]
2nvz
automatically matched to d1i50b_
complexed with mg, utp, zn
region b:20-1223
[138694]
RNA-polymerase beta [64488]
Thermus aquaticus
[TaxId: 271]
[64489] (4)
1ynj
complexed with srn, zn
region c:1-1114
[144703]
1i6v
complexed with mg, rfp, zn
chain c
[61856]
1ynn
automatically matched to 1YNJ C:1-1114
complexed with rfp, zn
region c:1-1114
[144705]
2gho
automatically matched to 1YNJ C:1-1114
region c:1-1114
[145196]
Thermus thermophilus
[TaxId: 274]
[75609] (24)
SQ
Q8RQE9
; part of multichain biological unit
1smy
complexed with g4p, mg, zn
chain c
[105778]
chain m
[105788]
2a6h
automatically matched to d1iw7c_
complexed with mg, std, zn
region c:1-1119
[126264]
2a6h
automatically matched to d1iw7c_
complexed with mg, std, zn
region m:1-1119
[126274]
2a69
automatically matched to d1iw7c_
complexed with mg, rpt, zn
region c:1-1119
[126215]
2a69
automatically matched to d1iw7c_
complexed with mg, rpt, zn
region m:1-1119
[126225]
2a68
automatically matched to d1iw7c_
complexed with mg, rbt, zn
region c:1-1119
[126195]
2a68
automatically matched to d1iw7c_
complexed with mg, rbt, zn
region m:1-1119
[126205]
2be5
automatically matched to d1iw7c_
complexed with mg, tgt, zn
region c:1-1119
[128355]
2be5
automatically matched to d1iw7c_
complexed with mg, tgt, zn
region m:1-1119
[128365]
1iw7
complexed with mg, pb
chain c
[71474]
chain m
[71482]
2o5i
automatically matched to d1iw7c_
complexed with mg, zn
region c:1-1119
[148600]
2o5i
automatically matched to d1iw7c_
complexed with mg, zn
region m:1-1119
[148603]
3dxj
automatically matched to d1iw7c_
complexed with mg, mpd, ne6, po4, zn
region c:1-1119
[157927]
3dxj
automatically matched to d1iw7c_
complexed with mg, mpd, ne6, po4, zn
region m:1-1119
[157930]
2a6e
automatically matched to d1iw7c_
complexed with mg, zn
region c:1-1119
[126244]
2a6e
automatically matched to d1iw7c_
complexed with mg, zn
region m:1-1119
[126254]
2o5j
automatically matched to d1iw7c_
complexed with apc, mg, zn
region c:1-1119
[148605]
2o5j
automatically matched to d1iw7c_
complexed with apc, mg, zn
region m:1-1119
[148607]
2ppb
automatically matched to d1iw7c_
complexed with apc, mg, std, zn
region c:1-1119
[149753]
2ppb
automatically matched to d1iw7c_
complexed with apc, mg, std, zn
region m:1-1119
[149755]
1zyr
automatically matched to d1iw7c_
complexed with mg, std, zn
region c:1-1119
[125853]
1zyr
automatically matched to d1iw7c_
complexed with mg, std, zn
region m:1-1119
[125863]
2cw0
automatically matched to d1iw7c_
complexed with mg, zn
region c:1-1119
[130902]
2cw0
automatically matched to d1iw7c_
complexed with mg, zn
region m:1-1119
[130912]
RNA-polymerase beta-prime
[64490] (3)
RBP1 [64486]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[64487] (25)
SQ
P04050
; part of multichain biological unit
1twf
complexed with mn, utp, zn
chain a
[112725]
1i50
complexed with mn, zn
chain a
[61754]
1k83
complexed with ilx, mn, trx, zn
chain a
[68275]
1i3q
complexed with mg, zn
chain a
[61607]
2nvq
automatically matched to d1i50a_
complexed with dut, mg, zn
region a:3-1445
[138634]
1twc
complexed with gtp, mn, zn
chain a
[112711]
1twa
complexed with atp, mn, zn
chain a
[112696]
1i6h
complexed with mg, zn
chain a
[61831]
1twh
complexed with atp, mn, zn
chain a
[112751]
1twg
complexed with ctp, mn, zn
chain a
[112738]
2nvy
automatically matched to d1i50a_
complexed with mn, zn
region a:2-1450
[138680]
2e2i
automatically matched to d1i50a_
complexed with dgt, mg, zn
region a:3-1449
[131994]
2e2j
automatically matched to d1i50a_
complexed with g2p, mg, zn
region a:3-1445
[132007]
2b63
automatically matched to d1i50a_
complexed with 5bu, mg, zn
region a:2-1450
[127917]
2ja7
automatically matched to d1i50a_
complexed with bru, mg, tt, zn
region a:2-1450
[138190]
2ja7
automatically matched to d1i50a_
complexed with bru, mg, tt, zn
region m:2-1450
[138206]
2nvx
automatically matched to d1i50a_
complexed with dut, mg, zn
region a:3-1445
[138667]
2nvt
automatically matched to d1i50a_
complexed with g2p, mg, zn
region a:3-1450
[138647]
2ja5
automatically matched to d1i50a_
complexed with bru, mg, zn
region a:2-1450
[138158]
2ja8
automatically matched to d1i50a_
complexed with bru, mg, tt, zn
region a:2-1450
[138222]
2b8k
automatically matched to d1i50a_
complexed with zn
region a:2-1450
[128076]
2ja6
automatically matched to d1i50a_
complexed with bru, mg, tt, zn
region a:2-1450
[138174]
2yu9
automatically matched to d1i50a_
complexed with mg, utp, zn
region a:3-1450
[140064]
2e2h
automatically matched to d1i50a_
complexed with gtp, mg, zn
region a:2-1445
[131981]
2nvz
automatically matched to d1i50a_
complexed with mg, utp, zn
region a:2-1445
[138693]
RNA-polymerase beta-prime [64493]
Thermus aquaticus
[TaxId: 271]
[64494] (4)
1ynj
complexed with srn, zn
region d:3-1240
[144704]
1i6v
complexed with mg, rfp, zn
chain d
[61857]
1ynn
automatically matched to 1YNJ D:3-1240
complexed with rfp, zn
region d:3-1240
[144706]
2gho
region d:3-1501
[145197]
Thermus thermophilus
[TaxId: 274]
[75610] (24)
SQ
Q8RQE8
; part of multichain biological unit
1smy
complexed with g4p, mg, zn
chain d
[105779]
chain n
[105789]
2a6h
automatically matched to d1iw7d_
complexed with mg, std, zn
region d:2-1505
[126265]
2a6h
automatically matched to d1iw7d_
complexed with mg, std, zn
region n:2-1505
[126275]
2a69
automatically matched to d1iw7d_
complexed with mg, rpt, zn
region d:2-1505
[126216]
2a69
automatically matched to d1iw7d_
complexed with mg, rpt, zn
region n:2-1505
[126226]
2a68
automatically matched to d1iw7d_
complexed with mg, rbt, zn
region d:2-1505
[126196]
2a68
automatically matched to d1iw7d_
complexed with mg, rbt, zn
region n:2-1505
[126206]
2be5
automatically matched to d1iw7d_
complexed with mg, tgt, zn
region d:2-1505
[128356]
2be5
automatically matched to d1iw7d_
complexed with mg, tgt, zn
region n:2-1505
[128366]
1iw7
complexed with mg, pb
chain d
[71475]
chain n
[71483]
2o5i
automatically matched to d1iw7d_
complexed with mg, zn
region d:2-1505
[148601]
2o5i
automatically matched to d1iw7d_
complexed with mg, zn
region n:2-1505
[148604]
3dxj
automatically matched to d1iw7d_
complexed with mg, mpd, ne6, po4, zn
region d:2-1505
[157928]
3dxj
automatically matched to d1iw7d_
complexed with mg, mpd, ne6, po4, zn
region n:2-1505
[157931]
2a6e
automatically matched to d1iw7d_
complexed with mg, zn
region d:2-1505
[126245]
2a6e
automatically matched to d1iw7d_
complexed with mg, zn
region n:2-1505
[126255]
2o5j
automatically matched to d1iw7d_
complexed with apc, mg, zn
region d:2-1505
[148606]
2o5j
automatically matched to d1iw7d_
complexed with apc, mg, zn
region n:2-1505
[148608]
2ppb
automatically matched to d1iw7d_
complexed with apc, mg, std, zn
region d:2-1505
[149754]
2ppb
automatically matched to d1iw7d_
complexed with apc, mg, std, zn
region n:2-1505
[149756]
1zyr
automatically matched to d1iw7d_
complexed with mg, std, zn
region d:2-1505
[125854]
1zyr
automatically matched to d1iw7d_
complexed with mg, std, zn
region n:2-1505
[125864]
2cw0
automatically matched to d1iw7d_
complexed with mg, zn
region d:2-1505
[130903]
2cw0
automatically matched to d1iw7d_
complexed with mg, zn
region n:2-1505
[130913]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk