Family: Nickel-iron hydrogenase, large subunit

Lineage:

1. Root: scop
2. Class: Multi-domain proteins (alpha and beta) [56572]
   Folds consisting of two or more domains belonging to different classes
3. Fold: HydB/Nqo4-like [56761]
   3 domains: (1) all-alpha; (2&3) alpha+beta
4. Superfamily: HydB/Nqo4-like [56762]
   uperfamily
5. Family: Nickel-iron hydrogenase, large subunit [56763]

Protein Domains:

1. Nickel-iron hydrogenase, large subunit [56764]
   1. Desulfovibrio gigas [TaxId: 879] [56765] (4)
      1. 1yq9
         complexed with f3s, fco, gol, h2s, mg, ni, per, sf4
         1. region h:7-536 [144716]
      2. 1yq9
         automatically matched to 1YQ9 H:7-536
         complexed with f3s, fco, gol, h2s, mg, ni, per, sf4
         1. region i:7-536 [144717]
      3. 2frv
         complexed with fco, fs3, fs4, mo3, ni, o
         1. chain l [43290]
         2. chain b [43291]
         3. chain d [43292]
         4. chain f [43293]
         5. chain h [43294]
         6. chain j [43295]
      4. 1frv
         complexed with fel, fs3, fs4, ni
         1. chain b [43296]
         2. chain d [43297]
   2. Desulfovibrio vulgaris [TaxId: 881] [56766] (16)
      1. 1wui
         automatically matched to d1ubhl_
         complexed with f3s, mg, mpd, mrd, nfc, sf4
         1. region l:19-552 [121289]
      2. 1wuk
         automatically matched to d1ubhl_
         complexed with f3s, mg, mrd, nfo, sf4
         1. region l:19-552 [121293]
      3. 1ubk
         complexed with cmo, fne, fs3, fs4, mg, mpd
         1. chain l [88422]
      4. 1ubl
         complexed with cmo, fne, fs3, fs4, mg, mpd
         1. chain l [88424]
      5. 1wuh
         automatically matched to d1ubhl_
         complexed with f3s, mg, mpd, nfc, sf4
         1. region l:19-552 [121287]
      6. 1ubh
         complexed with cmo, fne, fs3, fs4, mg, mpd
         1. chain l [88418]
      7. 1wuj
         automatically matched to d1ubhl_
         complexed with f3s, mg, nfo, sf4
         1. region l:19-552 [121291]
      8. 1ubr
         complexed with cmo, fne, fs3, fs4, mg
         1. chain l [88430]
      9. 1ubo
         complexed with cmo, fne, fs3, fs4, mg
         1. chain l [88428]
      10. 1ubt
          complexed with fne, fs3, fs4, mg
          1. chain l [88432]
      11. 1ubj
          complexed with cmo, fne, fs3, fs4, mg
          1. chain l [88420]
      12. 1ubm
          complexed with fne, fs3, fs4, mg, mpd
          1. chain l [88426]
      13. 1ubu
          complexed with fne, fs3, fs4, mg
          1. chain l [88434]
      14. 1wul
          automatically matched to d1ubhl_
          complexed with f3s, mg, mpd, mrd, nfr, sf4
          1. region l:19-552 [121295]
      15. 1h2r
          1. chain l [43298]
      16. 1h2a
          complexed with fs3, fs4, mg, nfe
          1. chain l [43299]
   3. Desulfovibrio fructosovorans [TaxId: 878] [56767] (1)
      1. 1frf
         complexed with fe, fs3, fs4, mg, ni
         1. chain l [43300]
   4. Desulfomicrobium baculatum [TaxId: 899] [56768] (1)
      1. 1cc1
         complexed with cse, fco, fe2, fs4, h2s, ni
         1. chain l [43301]
   5. Desulfovibrio desulfuricans [TaxId: 876] [64509] (1)
      1. 1e3d
         complexed with fne, fs3, fs4, fsx, h2s, mg
         1. chain b [59189]
         2. chain d [59191]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk