Structural Classification of Proteins
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Fold: HydA/Nqo6-like

2 domains: (1) alpa/beta; (2) Fe-S cluster-bound

Lineage:

  1. Root: scop
  2. Class: Multi-domain proteins (alpha and beta) [56572]
    Folds consisting of two or more domains belonging to different classes
  3. Fold: HydA/Nqo6-like [56769]
    2 domains: (1) alpa/beta; (2) Fe-S cluster-bound

Superfamilies:

  1. HydA/Nqo6-like [56770] (2)
    link to SUPERFAMILY database - Superfamily
    1. Nickel-iron hydrogenase, small subunit [56771] (5)
      1. Nickel-iron hydrogenase, small subunit [56772]
        1. Desulfovibrio gigas [TaxId: 879] [56773] (4)
          1. 1yq9 picpicxrefxref
            automatically matched to d2frva_
            complexed with f3s, fco, gol, h2s, mg, ni, per, sf4
            1. region a:4-264 [123873] picpiclink
          2. 1yq9 picpicxrefxref
            automatically matched to d2frva_
            complexed with f3s, fco, gol, h2s, mg, ni, per, sf4
            1. region b:5-264 [123874] picpiclink
          3. 2frv picpicxref
            complexed with fco, fs3, fs4, mo3, ni, o
            1. chain s [43302] picpiclink
            2. chain a [43303] picpiclink
            3. chain c [43304] picpiclink
            4. chain e [43305] picpiclink
            5. chain g [43306] picpiclink
            6. chain i [43307] picpiclink
          4. 1frv picpicxref
            complexed with fel, fs3, fs4, ni
            1. chain a [43308] picpiclink
            2. chain c [43309] picpiclink
        2. Desulfovibrio vulgaris [TaxId: 881] [56774] (16)
          1. 1wui picpicxref
            automatically matched to d1h2as_
            complexed with f3s, mg, mpd, mrd, nfc, sf4
            1. region s:1-267 [121290] picpiclink
          2. 1wuk picpicxref
            automatically matched to d1h2as_
            complexed with f3s, mg, mrd, nfo, sf4
            1. region s:1-267 [121294] picpiclink
          3. 1ubk picpicxref
            complexed with cmo, fne, fs3, fs4, mg, mpd
            1. chain s [88423] picpiclink
          4. 1ubl picpicxref
            complexed with cmo, fne, fs3, fs4, mg, mpd
            1. chain s [88425] picpiclink
          5. 1wuh picpicxref
            automatically matched to d1h2as_
            complexed with f3s, mg, mpd, nfc, sf4
            1. region s:1-267 [121288] picpiclink
          6. 1ubh picpicxref
            complexed with cmo, fne, fs3, fs4, mg, mpd
            1. chain s [88419] picpiclink
          7. 1wuj picpicxref
            automatically matched to d1h2as_
            complexed with f3s, mg, nfo, sf4
            1. region s:1-267 [121292] picpiclink
          8. 1ubr picpicxref
            complexed with cmo, fne, fs3, fs4, mg
            1. chain s [88431] picpiclink
          9. 1ubo picpicxref
            complexed with cmo, fne, fs3, fs4, mg
            1. chain s [88429] picpiclink
          10. 1ubt picpicxref
            complexed with fne, fs3, fs4, mg
            1. chain s [88433] picpiclink
          11. 1ubj picpicxref
            complexed with cmo, fne, fs3, fs4, mg
            1. chain s [88421] picpiclink
          12. 1ubm picpicxref
            complexed with fne, fs3, fs4, mg, mpd
            1. chain s [88427] picpiclink
          13. 1ubu picpicxref
            complexed with fne, fs3, fs4, mg
            1. chain s [88435] picpiclink
          14. 1wul picpicxref
            automatically matched to d1h2as_
            complexed with f3s, mg, mpd, mrd, nfr, sf4
            1. region s:1-267 [121296] picpiclink
          15. 1h2r picpicxref
            1. chain s [43310] picpiclink
          16. 1h2a picpicxref
            complexed with fs3, fs4, mg, nfe
            1. chain s [43311] picpiclink
        3. Desulfovibrio fructosovorans [TaxId: 878] [56775] (1)
          1. 1frf picpicxref
            complexed with fe, fs3, fs4, mg, ni
            1. chain s [43312] picpiclink
        4. Desulfomicrobium baculatum [TaxId: 899] [56776] (1)
          1. 1cc1 picpicxref
            complexed with cse, fco, fe2, fs4, h2s, ni
            1. chain s [43313] picpiclink
        5. Desulfovibrio desulfuricans [TaxId: 876] [64510] (1)
          1. 1e3d picpicxref
            complexed with fne, fs3, fs4, fsx, h2s, mg
            1. chain a [59188] picpiclink
            2. chain c [59190] picpiclink
    2. Nq06-like [144031] (1)
      Pfam 01058
      1. NAD-quinone oxidoreductase chain 6, Nqo6 [144032]
        1. Thermus thermophilus [TaxId: 274] [144033] (4)
          SQ Q56218 14-174
          1. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with fes, fmn, sf4
            1. region 6:15-175 [134131] picpiclink
          2. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2FUG 6:15-175
            complexed with fes, fmn, sf4
            1. region f:15-175 [134144] picpiclink
          3. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2FUG 6:15-175
            complexed with fes, fmn, sf4
            1. region o:15-175 [134157] picpiclink
          4. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2FUG 6:15-175
            complexed with fes, fmn, sf4
            1. region x:15-175 [134170] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk