Structural Classification of Proteins
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Fold: Prismane protein-like

3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology

Lineage:

  1. Root: scop
  2. Class: Multi-domain proteins (alpha and beta) [56572]
    Folds consisting of two or more domains belonging to different classes
  3. Fold: Prismane protein-like [56820]
    3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology

Superfamilies:

  1. Prismane protein-like [56821] (3)
    link to SUPERFAMILY database - Superfamily
    1. Carbon monoxide dehydrogenase [64514] (3)
      1. Ni-containing carbon monoxide dehydrogenase [64515]
        1. Carboxydothermus hydrogenoformans [TaxId: 129958] [64516] (7)
          1. 1su8 picpic
            complexed with fes, fs4, nfs
            1. chain a [98999] picpiclink
          2. 1su7 picpic
            complexed with fes, fs4, nfs
            1. chain a [98998] picpiclink
          3. 1suf picpic
            complexed with fes, fs4, nfs
            1. chain a [99002] picpiclink
          4. 3b51 picpic
            automatically matched to d1su6a_
            complexed with b51, fe2, fes, sf4
            1. region x:4-636 [154829] picpiclink
          5. 3b53 picpic
            automatically matched to d1su6a_
            complexed with b51, fe2, fes, sf4
            1. region x:4-636 [154831] picpiclink
          6. 3b52 picpic
            automatically matched to d1su6a_
            complexed with b51, co2, fe2, fes, sf4
            1. region x:4-636 [154830] picpiclink
          7. 1su6 picpic
            complexed with fes, fs4, nfs
            1. chain a [98997] picpiclink
        2. Rhodospirillum rubrum [TaxId: 1085] [69896] (1)
          1. 1jqk picpic
            complexed with fe2, sf4, unx, wcc
            1. chain a [67101] picpiclink
            2. chain b [67102] picpiclink
            3. chain c [67103] picpiclink
            4. chain d [67104] picpiclink
            5. chain e [67105] picpiclink
            6. chain f [67106] picpiclink
      2. Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit [82850]
        1. Moorella thermoacetica [TaxId: 1525] [82851] (6)
          1. 1oao picpicxref
            complexed with act, bct, cmo, fe2, gol, ni, sf4, so4, sx, xcc, zn
            1. chain a [86744] picpiclink
            2. chain b [86745] picpiclink
          2. 1mjg picpicxref
            complexed with act, cu1, fs4, ni, xcc
            1. chain a [79200] picpiclink
            2. chain b [79201] picpiclink
            3. chain c [79202] picpiclink
            4. chain d [79203] picpiclink
          3. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region a:2-674 [154211] picpiclink
          4. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region b:2-674 [154212] picpiclink
          5. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region c:2-674 [154213] picpiclink
          6. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region d:2-674 [154214] picpiclink
    2. Hybrid cluster protein (prismane protein) [56822] (2)
      contains extra N-terminal 3-helical bundle domain
      1. Hybrid cluster protein (prismane protein) [56823]
        1. Desulfovibrio vulgaris [TaxId: 881] [56824] (6)
          1. 1gnt picpic
            complexed with fs4, fso
            1. chain a [70290] picpiclink
          2. 1w9m picpic
            automatically matched to d1e2ua_
            complexed with fs2, sf4
            1. region a:1-553 [120786] picpiclink
          3. 1oa1 picpic
            complexed with gol, sf3, sf4
            1. chain a [86720] picpiclink
          4. 1e2u picpic
            complexed with fs4, fso
            1. chain a [43362] picpiclink
          5. 1e1d picpic
            complexed with fs4, fso
            1. chain a [43363] picpiclink
          6. 1e9v picpic
            complexed with acy, edo, fs4, fso, gol, trs, xe
            1. chain a [64845] picpiclink
        2. Desulfovibrio desulfuricans [TaxId: 876] [75636] (4)
          1. 1oa0 picpic
            complexed with mes, sf3, sf4
            1. chain a [86718] picpiclink
            2. chain b [86719] picpiclink
          2. 1gnl picpic
            complexed with act, fs4, fso
            1. chain a [70287] picpiclink
            2. chain b [70288] picpiclink
          3. 1upx picpic
            complexed with fso, mes, sf3, sf4
            1. chain a [99775] picpiclink
            2. chain b [99776] picpiclink
          4. 1gn9 picpic
            complexed with css, fs4, fso
            1. chain a [70285] picpiclink
            2. chain b [70286] picpiclink
    3. Acetyl-CoA synthase [82852] (2)
      4 domains: structures and assembly of domains 1 and 2 are similar to those of domains 1 and 3 of the CODH subunit; (3 and 4) alpha+beta
      1. Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit [82853]
        1. Moorella thermoacetica [TaxId: 1525] [82854] (6)
          1. 1oao picpicxref
            complexed with act, bct, cmo, fe2, gol, ni, sf4, so4, sx, xcc, zn
            1. chain c [86746] picpiclink
            2. chain d [86747] picpiclink
          2. 1mjg picpicxref
            complexed with act, cu1, fs4, ni, xcc
            1. chain m [79204] picpiclink
            2. chain n [79205] picpiclink
            3. chain o [79206] picpiclink
            4. chain p [79207] picpiclink
          3. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region m:2-729 [154215] picpiclink
          4. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region n:2-729 [154216] picpiclink
          5. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region o:2-728 [154217] picpiclink
          6. 2z8y picpicxrefxrefxrefxref
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region p:2-729 [154218] picpiclink
      2. Monomeric acetyl-CoA synthase [103406]
        1. Carboxydothermus hydrogenoformans [TaxId: 129958] [103407] (1)
          1. 1ru3 picpic
            complexed with fs4, gol, ni
            1. chain a [97835] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk