Superfamily: Prismane protein-like

uperfamily

Lineage:

1. Root: scop
2. Class: Multi-domain proteins (alpha and beta) [56572]
   Folds consisting of two or more domains belonging to different classes
3. Fold: Prismane protein-like [56820]
   3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology
4. Superfamily: Prismane protein-like [56821]
   uperfamily

Families:

1. Carbon monoxide dehydrogenase [64514] (3)
   1. Ni-containing carbon monoxide dehydrogenase [64515]
      1. Carboxydothermus hydrogenoformans [TaxId: 129958] [64516] (7)
         1. 1su8
            complexed with fes, fs4, nfs
            1. chain a [98999]
         2. 1su7
            complexed with fes, fs4, nfs
            1. chain a [98998]
         3. 1suf
            complexed with fes, fs4, nfs
            1. chain a [99002]
         4. 3b51
            automatically matched to d1su6a_
            complexed with b51, fe2, fes, sf4
            1. region x:4-636 [154829]
         5. 3b53
            automatically matched to d1su6a_
            complexed with b51, fe2, fes, sf4
            1. region x:4-636 [154831]
         6. 3b52
            automatically matched to d1su6a_
            complexed with b51, co2, fe2, fes, sf4
            1. region x:4-636 [154830]
         7. 1su6
            complexed with fes, fs4, nfs
            1. chain a [98997]
      2. Rhodospirillum rubrum [TaxId: 1085] [69896] (1)
         1. 1jqk
            complexed with fe2, sf4, unx, wcc
            1. chain a [67101]
            2. chain b [67102]
            3. chain c [67103]
            4. chain d [67104]
            5. chain e [67105]
            6. chain f [67106]
   2. Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit [82850]
      1. Moorella thermoacetica [TaxId: 1525] [82851] (6)
         1. 1oao
            complexed with act, bct, cmo, fe2, gol, ni, sf4, so4, sx, xcc, zn
            1. chain a [86744]
            2. chain b [86745]
         2. 1mjg
            complexed with act, cu1, fs4, ni, xcc
            1. chain a [79200]
            2. chain b [79201]
            3. chain c [79202]
            4. chain d [79203]
         3. 2z8y
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region a:2-674 [154211]
         4. 2z8y
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region b:2-674 [154212]
         5. 2z8y
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region c:2-674 [154213]
         6. 2z8y
            automatically matched to d1oaoa_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region d:2-674 [154214]
2. Hybrid cluster protein (prismane protein) [56822] (2)
   contains extra N-terminal 3-helical bundle domain
   1. Hybrid cluster protein (prismane protein) [56823]
      1. Desulfovibrio vulgaris [TaxId: 881] [56824] (6)
         1. 1gnt
            complexed with fs4, fso
            1. chain a [70290]
         2. 1w9m
            automatically matched to d1e2ua_
            complexed with fs2, sf4
            1. region a:1-553 [120786]
         3. 1oa1
            complexed with gol, sf3, sf4
            1. chain a [86720]
         4. 1e2u
            complexed with fs4, fso
            1. chain a [43362]
         5. 1e1d
            complexed with fs4, fso
            1. chain a [43363]
         6. 1e9v
            complexed with acy, edo, fs4, fso, gol, trs, xe
            1. chain a [64845]
      2. Desulfovibrio desulfuricans [TaxId: 876] [75636] (4)
         1. 1oa0
            complexed with mes, sf3, sf4
            1. chain a [86718]
            2. chain b [86719]
         2. 1gnl
            complexed with act, fs4, fso
            1. chain a [70287]
            2. chain b [70288]
         3. 1upx
            complexed with fso, mes, sf3, sf4
            1. chain a [99775]
            2. chain b [99776]
         4. 1gn9
            complexed with css, fs4, fso
            1. chain a [70285]
            2. chain b [70286]
3. Acetyl-CoA synthase [82852] (2)
   4 domains: structures and assembly of domains 1 and 2 are similar to those of domains 1 and 3 of the CODH subunit; (3 and 4) alpha+beta
   1. Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit [82853]
      1. Moorella thermoacetica [TaxId: 1525] [82854] (6)
         1. 1oao
            complexed with act, bct, cmo, fe2, gol, ni, sf4, so4, sx, xcc, zn
            1. chain c [86746]
            2. chain d [86747]
         2. 1mjg
            complexed with act, cu1, fs4, ni, xcc
            1. chain m [79204]
            2. chain n [79205]
            3. chain o [79206]
            4. chain p [79207]
         3. 2z8y
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region m:2-729 [154215]
         4. 2z8y
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region n:2-729 [154216]
         5. 2z8y
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region o:2-728 [154217]
         6. 2z8y
            automatically matched to d1oaoc_
            complexed with cu1, gol, ni, sf4, xcc, xe
            1. region p:2-729 [154218]
   2. Monomeric acetyl-CoA synthase [103406]
      1. Carboxydothermus hydrogenoformans [TaxId: 129958] [103407] (1)
         1. 1ru3
            complexed with fs4, gol, ni
            1. chain a [97835]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk