Structural Classification of Proteins

Fold: beta-lactamase/transpeptidase-like

: contains a cluster of helices and an alpha+beta sandwich

Lineage:

Root: scop
Class: Multi-domain proteins (alpha and beta) [56572]
Folds consisting of two or more domains belonging to different classes
Fold: beta-lactamase/transpeptidase-like [56600]
contains a cluster of helices and an alpha+beta sandwich

Superfamilies:

beta-lactamase/transpeptidase-like [56601] (3)
uperfamily
1. beta-Lactamase/D-ala carboxypeptidase [56602] (38)
  1. D-ala carboxypeptidase/transpeptidase [56603]
    1. Streptomyces sp., K15 [TaxId: 1931] [56604] (7)
      1. 1es5
        mutant
        
        chain a [42679]
      2. 1es2
        mutant
        
        chain a [42680]
      3. 1j9m
        complexed with cl, na; mutant
        
        chain a [62764]
      4. 1esi
        mutant
        
        chain a [42682]
      5. 1es4
        mutant
        
        chain a [42683]
      6. 1skf
        
        chain a [42684]
      7. 1es3
        complexed with na; mutant
        
        chain a [42685]
    2. Streptomyces sp., R61 [TaxId: 1931] [56605] (15)
      SQ P15555 34-378 ! SQ P15555
      1. 1yqs
        automatically matched to d1cef__
        complexed with bsa, gol
        
        region a:3-347 [123899]
      2. 1pwg
        complexed with hel
        
        chain a [104340]
      3. 1mpl
        complexed with gol, re1
        
        chain a [79387]
      4. 1scw
        complexed with cp5, gol
        
        chain a [105423]
      5. 1pwc
        complexed with pnm
        
        chain a [104338]
      6. 1sde
        complexed with 2pb, gol
        
        chain a [112073]
      7. 1hvb
        complexed with ceh
        
        chain a [42686]
      8. 1pw1
        complexed with flh, gol, hel
        
        chain a [104334]
      9. 1pwd
        complexed with csc
        
        chain a [104339]
      10. 1iki
        complexed with dal, rey
        
        chain a [76751]
      11. 1pw8
        complexed with gol, h2a
        
        chain a [104337]
      12. 3pte
        
        chain a [42687]
      13. 1ceg
        complexed with cep
        
        chain a [42688]
      14. 1ikg
        complexed with rex
        
        chain a [76750]
      15. 1cef
        complexed with cef
        
        chain a [42689]
  2. Esterase EstB [69873]
    1. Burkholderia gladioli [TaxId: 28095] [69874] (2)
      1. 1ci9
        complexed with dfp
        
        chain a [64767]
        chain b [64768]
      2. 1ci8
        complexed with ioh
        
        chain a [64765]
        chain b [64766]
  3. beta-Lactamase, class A [56606]
    1. Escherichia coli, TEM-1 [TaxId: 562] [56607] (35)
      1. 1m40
        ultra high resolution structure
        complexed with cb4, k, po4; mutant
        
        chain a [74437]
      2. 1nym
        complexed with cxb, k, po4; mutant
        
        chain a [92344]
      3. 1li9
        TEM-34 variant
        complexed with k, po4; mutant
        
        chain a [77969]
      4. 1pzp
        complexed with fta; mutant
        
        chain a [95465]
      5. 1nxy
        complexed with k, sm2; mutant
        
        chain a [92313]
      6. 1zg4
        automatically matched to d1axb__
        
        region a:26-290 [125009]
      7. 1jvj
        complexed with im2, k; mutant
        
        chain a [71896]
      8. 1li0
        TEM-32 variant
        complexed with bct, k; mutant
        
        chain a [77968]
      9. 1ny0
        complexed with k, nbf, po4; mutant
        
        chain a [92314]
      10. 1btl
        complexed with so4
        
        chain a [42691]
      11. 2b5r
        mutant
        
        region a:26-288 [144952]
      12. 2b5r
        automatically matched to 2B5R A:26-288
        mutant
        
        region b:26-288 [144953]
      13. 1jtg
        complexed with ca; mutant
        
        chain a [67266]
        chain c [67268]
      14. 1jwz
        TEM-64 variant
        complexed with 105; mutant
        
        chain a [71922]
      15. 1jwp
        complexed with po4; mutant
        
        chain a [71917]
      16. 1jwv
        complexed with cb4, k; mutant
        
        chain a [71918]
      17. 1tem
        complexed with alp
        
        chain a [42692]
      18. 1erm
        complexed with bji
        
        chain a [42690]
      19. 1bt5
        complexed with im2, so4; mutant
        
        chain a [42693]
      20. 1fqg
        acyl-enzyme intermediate
        complexed with pnm; mutant
        
        chain a [42699]
      21. 1axb
        complexed with fos; mutant
        
        chain a [42695]
      22. 1xpb
        complexed with so4
        
        chain a [42694]
      23. 1nyy
        complexed with 105; mutant
        
        chain a [92362]
      24. 1pzo
        complexed with cbt; mutant
        
        chain a [95464]
      25. 1lhy
        TEM-30 variant
        complexed with po4; mutant
        
        chain a [77967]
      26. 1esu
        complexed with so4; mutant
        
        chain a [42696]
      27. 1ck3
        mutant
        
        chain a [42698]
      28. 1erq
        complexed with bjh
        
        chain a [42697]
      29. 1jtd
        complexed with ca
        
        chain a [67264]
      30. 3c7v
        automatically matched to d1axba_
        mutant
        
        region a:26-288 [156019]
      31. 3c7v
        automatically matched to d1axba_
        mutant
        
        region c:26-288 [156020]
      32. 3c7u
        automatically matched to d1axba_
        mutant
        
        region a:26-288 [156017]
      33. 3c7u
        automatically matched to d1axba_
        mutant
        
        region c:26-288 [156018]
      34. 1ero
        complexed with bjp
        
        chain a [42700]
      35. 1s0w
        complexed with ca; mutant
        
        chain a [98309]
        chain b [98310]
    2. Klebsiella pneumoniae, TEM52 [TaxId: 573] [64473] (1)
      1. 1htz
        mutant
        
        chain a [61262]
        chain b [61263]
        chain c [61264]
        chain d [61265]
        chain e [61266]
        chain f [61267]
    3. Escherichia coli, TOHO-1 [TaxId: 562] [56608] (5)
      1. 1iys
        complexed with so4
        
        chain a [90723]
      2. 1iyo
        complexed with cef, so4; mutant
        
        chain a [76970]
      3. 1bza
        complexed with so4; mutant
        
        chain a [42701]
      4. 1iyp
        complexed with cep, so4; mutant
        
        chain a [76971]
      5. 1iyq
        complexed with pnm, so4; mutant
        
        chain a [76972]
    4. Proteus vulgaris [TaxId: 585] [75596] (1)
      1. 1hzo
        complexed with mes
        
        chain a [71092]
        chain b [71093]
    5. Klebsiella pneumoniae, SHV-1 [TaxId: 573] [56609] (15)
      SQ Q5PSW7 ! SQ P14557 22-286
      inhibited by tazobactam
      1. 2zd8
        automatically matched to d1onga_
        complexed with ma4, mer
        
        region a:26-292 [154391]
      2. 1ong
        complexed with ma4, wy4
        
        chain a [93356]
      3. 2h5s
        automatically matched to d1onga_
        complexed with ma4, sa2
        
        region a:26-292 [136168]
      4. 2a3u
        automatically matched to d1rcja_
        complexed with epe, ma4, tsl; mutant
        
        region a:26-292 [126098]
      5. 2a49
        automatically matched to d1rcja_
        complexed with epe, ma4, tem; mutant
        
        region a:26-292 [126149]
      6. 1rcj
        complexed with ma4, tbi; mutant
        
        chain a [97293]
      7. 2g2u
        automatically matched to d1onga_
        
        region a:26-292 [134540]
      8. 3c4o
        automatically matched to d1onga_
        complexed with so4; mutant
        
        region a:26-292 [155934]
      9. 1tdl
        complexed with epe, ma4; mutant
        
        chain a [112398]
      10. 1tdg
        complexed with ma4, mdd, mpd, tbe; mutant
        
        chain a [112397]
      11. 3c4p
        automatically matched to d1onga_
        complexed with so4; mutant
        
        region a:26-292 [155935]
      12. 2g2w
        mutant
        
        region a:26-292 [145180]
      13. 1q2p
        complexed with ma4, wy2
        
        chain a [104501]
      14. 1vm1
        complexed with akr, ma4, taz, tbe
        
        chain a [108875]
      15. 1shv
        complexed with ma4
        
        chain a [42703]
    6. Klebsiella pneumoniae, SHV-2 [TaxId: 573] [90082] (1)
      almost identical sequence to SHV-1
      1. 1n9b
        complexed with epe, ma4, mpd
        
        chain a [85463]
    7. Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287] [56610] (2)
      1. 1g6a
        complexed with so4; mutant
        
        chain a [42704]
      2. 1g68
        complexed with so4
        
        chain a [42705]
    8. Staphylococcus aureus [TaxId: 1280] [56611] (16)
      1. 1ghp
        complexed with pnm, so4; mutant
        
        chain a [60520]
      2. 1dja
        mutant
        
        chain a [42706]
      3. 1ghm
        complexed with ced, co3, so4; mutant
        
        chain a [60519]
      4. 1kge
        mutant
        
        chain a [42708]
      5. 1djc
        complexed with so4; mutant
        
        chain a [42710]
      6. 3blm
        
        chain a [42709]
      7. 1djb
        mutant
        
        chain a [42711]
      8. 1kgf
        mutant
        
        chain a [42712]
      9. 1ghi
        complexed with co3; mutant
        
        chain a [60518]
      10. 1blh
        complexed with fos
        
        chain a [42713]
      11. 1kgg
        complexed with so4; mutant
        
        chain a [42715]
      12. 1blc
        complexed with cem, so4, tem
        
        chain a [42714]
      13. 1blp
        mutant
        
        chain a [42716]
      14. 1pio
        mutant
        
        chain a [42719]
        chain b [42720]
      15. 1alq
        circularly permuted
        complexed with co3, so4; mutant
        
        chain a [42707]
      16. 1ome
        omega loop deletion mutant (residues 163-178 deleted)
        
        chain a [42717]
        chain b [42718]
    9. Bacillus licheniformis [TaxId: 1402] [56612] (5)
      1. 1i2s
        complexed with cit, na
        
        chain a [71104]
        chain b [71105]
      2. 1i2w
        complexed with cfx, out
        
        chain a [71106]
        chain b [71107]
      3. 4blm
        
        chain a [42721]
        chain b [42722]
      4. 1mbl
        complexed with so4; mutant
        
        chain a [42723]
        chain b [42724]
      5. 2blm
        CA-atoms only
        
        chain a [42725]
        chain b [42726]
    10. Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550] [56613] (2)
      1. 1bue
        
        chain a [42727]
      2. 1bul
        complexed with ap3, mes
        
        chain a [42728]
    11. Streptomyces albus G [TaxId: 1962] [56614] (1)
      1. 1bsg
        complexed with act
        
        chain a [42729]
    12. Mycobacterium fortuitum [TaxId: 1766] [56615] (1)
      1. 2cc1
        automatically matched to d1mfoa_
        
        region a:27-293 [130211]
    13. Pseudomonas aeruginosa, PER-1 [TaxId: 287] [56616] (1)
      1. 1e25
        complexed with so4; mutant
        
        chain a [42731]
    14. Serratia marcescens, Sme-1 [TaxId: 615] [56617] (1)
      imipenem-hydrolyzing
      1. 1dy6
        
        chain a [42732]
        chain b [42733]
    15. Stenotrophomonas maltophilia, L2 [TaxId: 40324] [103374] (2)
      1. 1o7e
        complexed with gol, so4
        
        chain a [92622]
        chain b [92623]
      2. 1n4o
        complexed with so4
        
        chain a [91621]
        chain b [91622]
  4. AMPC beta-Lactamase, class C [56618]
    contains small alpha+beta subdomain inserted in the common fold
    1. Citrobacter freundii [TaxId: 546] [56619] (3)
      1. 1rgy
        complexed with mpd, ptx
        
        chain a [97456]
      2. 1fr1
        
        chain a [42734]
        chain b [42735]
      3. 1fr6
        complexed with azr
        
        chain a [42736]
        chain b [42737]
    2. Enterobacter cloacae, P99, cephalosporinase [TaxId: 550] [56620] (10)
      SQ P05364 22-380 ! SQ P05364 22-381
      1. 1onh
        complexed with gol, wy4
        
        chain a [93357]
      2. 1rgz
        complexed with gol, ptx
        
        chain a [97457]
      3. 1q2q
        complexed with gol, wy2
        
        chain a [104502]
      4. 1ga0
        complexed with dvr, gol, na
        
        chain a [60410]
      5. 1gce
        
        chain a [42738]
      6. 1xx2
        
        chain a [116136]
        chain b [116137]
      7. 2q9m
        automatically matched to d1blsa_
        complexed with lk7
        
        region a:2-360 [150147]
      8. 1bls
        complexed with ipp
        
        chain a [42741]
        chain b [42742]
      9. 2q9n
        automatically matched to d1blsa_
        complexed with lk5
        
        region a:2-360 [150148]
      10. 1s6r
        complexed with iap
        
        chain a [98604]
    3. Escherichia coli, cephalosporinase [TaxId: 562] [56621] (60)
      1. 2hds
        automatically matched to d1c3ba_
        complexed with 4mb, na, po4, suc
        
        region a:4-361 [136350]
      2. 2hds
        automatically matched to d1c3ba_
        complexed with 4mb, na, po4, suc
        
        region b:4-361 [136351]
      3. 2ffy
        automatically matched to d1pi4a_
        complexed with k, po4, sm3; mutant
        
        region a:4-361 [133394]
      4. 2ffy
        automatically matched to d1pi4a_
        complexed with k, po4, sm3; mutant
        
        region b:4-361 [133395]
      5. 1pi4
        complexed with k, po4, sm3; mutant
        
        chain a [94700]
        chain b [94701]
      6. 2hdu
        automatically matched to d1c3ba_
        complexed with f12, k, po4
        
        region a:4-361 [136352]
      7. 2hdu
        automatically matched to d1c3ba_
        complexed with f12, k, po4
        
        region b:4-361 [136353]
      8. 1pi5
        complexed with k, po4, sm2; mutant
        
        chain a [94702]
        chain b [94703]
      9. 1l0g
        complexed with po4, suc; mutant
        
        chain a [73400]
        chain b [73401]
      10. 1l0d
        complexed with po4; mutant
        
        chain a [73394]
        chain b [73395]
      11. 1kvl
        complexed with cls, kcp, po4, thn; mutant
        
        chain a [73062]
        chain b [73063]
      12. 1l0f
        complexed with po4; mutant
        
        chain a [73398]
        chain b [73399]
      13. 1my8
        complexed with po4, sm3
        
        chain a [85236]
        chain b [85237]
      14. 2r9w
        automatically matched to d1c3ba_
        complexed with 23c, po4
        
        region a:4-361 [151806]
      15. 2r9w
        automatically matched to d1c3ba_
        complexed with 23c, po4
        
        region b:4-361 [151807]
      16. 1llb
        complexed with pcn
        
        chain a [78092]
        chain b [78093]
      17. 2p9v
        automatically matched to d1c3ba_
        complexed with po4
        
        region a:4-361 [149335]
      18. 2p9v
        automatically matched to d1c3ba_
        complexed with po4
        
        region b:4-361 [149336]
      19. 1ke4
        complexed with po4
        
        chain a [72362]
        chain b [72363]
      20. 1fsy
        complexed with 105, po4
        
        chain a [60016]
        chain b [60017]
      21. 1i5q
        complexed with mox; mutant
        
        chain a [61820]
        chain b [61821]
      22. 2r9x
        automatically matched to d1c3ba_
        complexed with dms, po4, wh6
        
        region a:4-361 [151808]
      23. 2r9x
        automatically matched to d1c3ba_
        complexed with dms, po4, wh6
        
        region b:4-361 [151809]
      24. 1l0e
        complexed with po4; mutant
        
        chain a [73396]
        chain b [73397]
      25. 2pu2
        automatically matched to d1c3ba_
        complexed with dk2, po4
        
        region a:4-361 [149850]
      26. 2pu2
        automatically matched to d1c3ba_
        complexed with dk2, po4
        
        region b:4-361 [149851]
      27. 1mxo
        complexed with po4, sm2
        
        chain a [85195]
        chain b [85196]
      28. 1o07
        complexed with k, mxg; mutant
        
        chain a [92390]
        chain b [92391]
      29. 1l2s
        complexed with stc
        
        chain a [73512]
        chain b [73513]
      30. 1ll9
        complexed with axl
        
        chain a [78090]
        chain b [78091]
      31. 1fsw
        complexed with ctb, po4
        
        chain a [60010]
        chain b [60011]
      32. 1ll5
        complexed with im2
        
        chain a [78075]
        chain b [78076]
      33. 1xgj
        automatically matched to d1c3ba_
        complexed with htc
        
        region a:4-361 [121978]
      34. 1xgj
        automatically matched to d1c3ba_
        complexed with htc
        
        region b:4-361 [121979]
      35. 1xgi
        automatically matched to d1c3ba_
        complexed with nst
        
        region a:4-361 [121976]
      36. 1xgi
        automatically matched to d1c3ba_
        complexed with nst
        
        region b:4-361 [121977]
      37. 2rcx
        automatically matched to d1c3ba_
        complexed with po4, sm4
        
        region a:4-361 [151913]
      38. 2rcx
        automatically matched to d1c3ba_
        complexed with po4, sm4
        
        region b:4-361 [151914]
      39. 1iel
        complexed with caz, po4
        
        chain a [62329]
        chain b [62330]
      40. 1kvm
        complexed with ceo, po4
        
        chain a [73064]
        chain b [73065]
      41. 2pu4
        automatically matched to d1c3ba_
        complexed with dms, ox6, ox7, so4
        
        region a:4-361 [149852]
      42. 2pu4
        automatically matched to d1c3ba_
        complexed with dms, ox6, ox7, so4
        
        region b:4-361 [149853]
      43. 2hdq
        automatically matched to d1c3ba_
        complexed with c21
        
        region a:4-361 [136346]
      44. 2hdq
        automatically matched to d1c3ba_
        complexed with c21
        
        region b:4-361 [136347]
      45. 2hdr
        automatically matched to d1c3ba_
        complexed with 4a3, po4
        
        region a:4-361 [136348]
      46. 2hdr
        automatically matched to d1c3ba_
        complexed with 4a3, po4
        
        region b:4-361 [136349]
      47. 2i72
        automatically matched to d1c3ba_
        complexed with va1
        
        region a:4-361 [147533]
      48. 2i72
        automatically matched to d1c3ba_
        complexed with va1
        
        region b:4-361 [147534]
      49. 1ke3
        complexed with bdb, po4
        
        chain a [72360]
        chain b [72361]
      50. 1iem
        complexed with cb4, po4
        
        chain a [62331]
        chain b [62332]
      51. 1ga9
        complexed with etp, k, po4
        
        chain a [60414]
        chain b [60415]
      52. 1kds
        complexed with npb
        
        chain a [72354]
        chain b [72355]
      53. 1kdw
        complexed with 4cb, po4
        
        chain a [72356]
        chain b [72357]
      54. 1c3b
        
        chain a [42743]
        chain b [42744]
      55. 1ke0
        complexed with cvb, po4
        
        chain a [72358]
        chain b [72359]
      56. 1fco
        complexed with mox; mutant
        
        chain a [42749]
        chain b [42750]
      57. 3bls
        complexed with apb
        
        chain a [42745]
        chain b [42746]
      58. 1fcn
        complexed with lor; mutant
        
        chain a [42751]
        chain b [42752]
      59. 2bls
        
        chain a [42747]
        chain b [42748]
      60. 1fcm
        complexed with cxn; mutant
        
        chain a [42753]
        chain b [42754]
  5. Class D beta-lactamase [56622]
    1. Escherichia coli, OXA-1 [TaxId: 562] [82837] (1)
      1. 1m6k
        complexed with kcx, mpd
        
        chain a [78695]
        chain b [78696]
    2. Salmonella typhimurium, OXA-2 [TaxId: 90371] [90083] (1)
      1. 1k38
        complexed with fmt, kcx
        
        chain a [84303]
        chain b [84304]
    3. Pseudomonas aeruginosa, OXA-10 [TaxId: 287] [56623] (12)
      1. 1k55
        complexed with edo, sul
        
        chain a [68156]
        chain b [68157]
        chain c [68158]
        chain d [68159]
      2. 1e3u
        complexed with auc, edo, so4
        
        chain a [42755]
        chain b [42756]
        chain c [42757]
        chain d [42758]
      3. 1k4f
        complexed with so4
        
        chain a [68138]
        chain b [68139]
      4. 1k54
        complexed with edo, hoq, sul
        
        chain a [68152]
        chain b [68153]
        chain c [68154]
        chain d [68155]
      5. 1k56
        complexed with sul
        
        chain a [68160]
        chain b [68161]
        chain c [68162]
        chain d [68163]
      6. 1e4d
        complexed with edo, so4
        
        chain a [42759]
        chain b [42760]
        chain c [42761]
        chain d [42762]
      7. 1k57
        complexed with so4
        
        chain a [68164]
        chain b [68165]
        chain c [68166]
        chain d [68167]
      8. 1fof
        complexed with co, so4
        
        chain a [42763]
        chain b [42764]
      9. 1k6s
        complexed with ca, iap, kcx, so4
        
        chain a [84307]
        chain b [84308]
      10. 1k4e
        complexed with so4
        
        chain a [68136]
        chain b [68137]
      11. 1k6r
        complexed with mxl
        
        chain a [84305]
        chain b [84306]
      12. 1ewz
        
        chain a [42765]
        chain b [42766]
        chain c [42767]
        chain d [42768]
    4. Pseudomonas aeruginosa, OXA-13 [TaxId: 287] [64474] (3)
      1. 1h8z
        complexed with so4
        
        chain a [60803]
        chain b [60804]
      2. 1h5x
        complexed with im2, so4
        
        chain a [70899]
        chain b [70900]
      3. 1h8y
        complexed with mer, so4
        
        chain a [60801]
        chain b [60802]
  6. Penicillin receptor BlaR, C-terminal domain [103375]
    closely related to class D beta-lactamase
    1. Bacillus licheniformis [TaxId: 1402] [103376] (1)
      1. 1nrf
        
        chain a [92086]
  7. Penicillin-binding protein 2x (pbp-2x), transpeptidase domain [56624]
    1. Streptococcus pneumoniae [TaxId: 1313] [56625] (14)
      1. 1qme
        complexed with so4
        
        region a:264-620 [42769]
      2. 1pyy
        complexed with mpd, osu, so4; mutant
        
        region a:264-631 [95388]
      3. 2z2m
        automatically matched to d1pmda4
        complexed with cds, so4
        
        region b:264-620 [153943]
      4. 2z2m
        automatically matched to d1pmda4
        complexed with cds, so4
        
        region e:264-620 [153946]
      5. 2zc3
        automatically matched to d1pmda4
        complexed with bmg, so4
        
        region b:264-619 [154324]
      6. 2zc3
        automatically matched to d1pmda4
        complexed with bmg, so4
        
        region e:264-620 [154327]
      7. 1qmf
        complexed with ces, kef
        
        region a:264-620 [42770]
      8. 2zc4
        automatically matched to d1pmda4
        complexed with so4, teb
        
        region b:264-619 [154330]
      9. 2zc4
        automatically matched to d1pmda4
        complexed with so4, teb
        
        region e:264-620 [154333]
      10. 2z2l
        automatically matched to d1pmda4
        complexed with so4
        
        region b:264-620 [153937]
      11. 2z2l
        automatically matched to d1pmda4
        complexed with so4
        
        region e:264-620 [153940]
      12. 1rp5
        complexed with so4
        
        region a:264-631 [97697]
        region b:264-631 [97701]
      13. 1k25
        mutant
        
        region a:264-631 [68036]
        region b:1264-1631 [68040]
        region c:2264-2631 [68044]
        region d:3264-3612 [68048]
      14. 1pmd
        CA-atoms only
        
        region a:264-630 [42771]
  8. Penicillin binding protein 2a (PBP2A), C-terminal domain [82838]
    1. Staphylococcus aureus [TaxId: 1280] [82839] (5)
      SQ O54286 27-668
      1. 1vqq
        complexed with cd, cl; mutant
        
        region a:328-668 [114011]
        region b:328-668 [114014]
      2. 1mws
        complexed with cd, cl, nc1; mutant
        
        region a:328-668 [79594]
        region b:328-668 [79597]
      3. 1mwt
        complexed with cd, cl, pg1; mutant
        
        region a:328-668 [79600]
        region b:328-668 [79603]
      4. 1mwu
        complexed with cd, cl, mc1; mutant
        
        region a:328-668 [79606]
        region b:328-668 [79609]
      5. 1mwr
        complexed with cd, cl, mse; mutant
        
        region a:328-668 [79588]
        region b:328-668 [79591]
  9. Penicillin-binding protein 5, N-terminal domain [69875]
    1. Escherichia coli [TaxId: 562] [69876] (8)
      1. 3bec
        automatically matched to d1hd8a2
        complexed with gol, hj2
        
        region a:4-262 [155182]
      2. 1z6f
        automatically matched to d1hd8a2
        complexed with bo9, gol
        
        region a:4-262 [124521]
      3. 1nzo
        complexed with bme
        
        region a:4-262 [92384]
      4. 1nj4
        mutant
        
        region a:3-262 [80546]
      5. 1nzu
        complexed with bme
        
        region a:3-262 [92389]
      6. 3beb
        automatically matched to d1hd8a2
        complexed with gol, hj3
        
        region a:4-262 [155180]
      7. 1hd8
        mutant
        
        region a:3-262 [65804]
      8. 1sdn
        automatically matched to d1hd8a2
        complexed with hg; mutant
        
        region a:3-262 [118950]
  10. D-aminopeptidase, N-terminal domain [56626]
    1. Ochrobactrum anthropi [TaxId: 529] [56627] (1)
      1. 1ei5
        
        region a:3-335 [42772]
  11. Pencillin binding protein 4 (PbpD), N-terminal domain [111287]
    1. Staphylococcus aureus [TaxId: 1280] [111288] (1)
      SQ Q53613 21-383
      1. 1tvf
        Structural genomics target
        complexed with so4, unl
        
        region a:15-315 [107359]
        region b:15-315 [107361]
  12. Regulatory protein BlaR1 [111289]
    1. Staphylococcus aureus [TaxId: 1280] [111290] (3)
      SQ P18357 338-582 ! SQ P18357 334-581 ! SQ P18357 338-583
      1. 1xkz
        complexed with caz, epe, so4
        
        chain a [115426]
        chain b [115427]
        chain c [115428]
        chain d [115429]
      2. 1xa1
        complexed with po4, pop
        
        chain a [109529]
        chain b [109530]
        chain c [109531]
        chain d [109532]
      3. 1xa7
        complexed with pg1
        
        chain a [109533]
        chain b [109534]
  13. D,D-carboxypeptidase DacA, N-terminal domain [118181]
    1. Streptococcus pneumoniae [TaxId: 1313] [118182] (1)
      SQ P72518 25-393
      1. 1xp4
        complexed with iod, so4
        
        region a:25-293 [115723]
        region b:25-293 [115725]
        region c:25-293 [115727]
        region d:25-293 [115729]
  14. Penicillin-binding protein 1a, transpeptidase domain [144034]
    1. Streptococcus pneumoniae [TaxId: 1313] [144035] (2)
      SQ Q8DR59 266-650! SQ Q8DR59 267-650
      1. 2c5w
        complexed with cl, edo, pcz, zn
        
        region b:266-650 [129958]
      2. 2c6w
        complexed with cl, zn
        
        region b:267-650 [130010]
  15. Penicillin-binding protein 1b, transpeptidase domain [144036]
    1. Streptococcus pneumoniae [TaxId: 1313] [144037] (3)
      SQ O70038 337-789! SQ O70038 337-791
      1. 2bg1
        complexed with cl, so4; mutant
        
        region a:337-789 [128457]
      2. 2fff
        complexed with ni
        
        region b:337-789 [133382]
      3. 2uwx
        automatically matched to 2BG3 A:337-791
        complexed with cl, edo, nc1, so4; mutant
        
        region a:337-790 [140002]
  16. D-Amino acid amidase DaaA [144038]
    1. Ochrobactrum anthropi [TaxId: 529] [144039] (24)
      SQ Q9LCC8 2-363
      1. 2drw
        complexed with ba
        
        region a:2-363 [131674]
      2. 2drw
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region b:2-363 [131675]
      3. 2drw
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region c:3-363 [131676]
      4. 2drw
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region d:2-363 [131677]
      5. 2drw
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region e:2-363 [131678]
      6. 2drw
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region f:7-358 [131679]
      7. 2efu
        automatically matched to 2DRW A:2-363
        complexed with ba, phe
        
        region a:2-363 [132109]
      8. 2efu
        automatically matched to 2DRW A:2-363
        complexed with ba, phe
        
        region b:4-363 [132110]
      9. 2efu
        automatically matched to 2DRW A:2-363
        complexed with ba, phe
        
        region c:3-363 [132111]
      10. 2efu
        automatically matched to 2DRW A:2-363
        complexed with ba, phe
        
        region d:2-363 [132112]
      11. 2efu
        automatically matched to 2DRW A:2-363
        complexed with ba, phe
        
        region e:2-363 [132113]
      12. 2efu
        automatically matched to 2DRW A:2-363
        complexed with ba, phe
        
        region f:4-358 [132114]
      13. 2efx
        automatically matched to 2DRW A:2-363
        complexed with ba, nfa
        
        region a:2-363 [132115]
      14. 2efx
        automatically matched to 2DRW A:2-363
        complexed with ba, nfa
        
        region b:2-363 [132116]
      15. 2efx
        automatically matched to 2DRW A:2-363
        complexed with ba, nfa
        
        region c:3-363 [132117]
      16. 2efx
        automatically matched to 2DRW A:2-363
        complexed with ba, nfa
        
        region d:2-363 [132118]
      17. 2efx
        automatically matched to 2DRW A:2-363
        complexed with ba, nfa
        
        region e:2-363 [132119]
      18. 2efx
        automatically matched to 2DRW A:2-363
        complexed with ba, nfa
        
        region f:9-361 [132120]
      19. 2dns
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region a:2-363 [131587]
      20. 2dns
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region b:2-363 [131588]
      21. 2dns
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region c:3-362 [131589]
      22. 2dns
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region d:2-362 [131590]
      23. 2dns
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region e:2-361 [131591]
      24. 2dns
        automatically matched to 2DRW A:2-363
        complexed with ba
        
        region f:8-358 [131592]
  17. Penicillin-binding protein 2, PBP2 [160970]
    1. Staphylococcus aureus [TaxId: 1280] [160971] (7)
      SQ Q2YY56 293-692
      1. 2olu
        automatically matched to 2OLV A:293-692
        complexed with edo
        
        region a:293-692 [148820]
      2. 2olv
        complexed with m0e
        
        region a:293-692 [148822]
      3. 2olv
        automatically matched to 2OLV A:293-692
        complexed with m0e
        
        region b:293-692 [148824]
      4. 3dwk
        automatically matched to 2OLV A:293-692
        complexed with lda, so4
        
        region a:296-692 [157914]
      5. 3dwk
        automatically matched to 2OLV A:293-692
        complexed with lda, so4
        
        region b:293-692 [157916]
      6. 3dwk
        automatically matched to 2OLV A:293-692
        complexed with lda, so4
        
        region c:293-692 [157918]
      7. 3dwk
        automatically matched to 2OLV A:293-692
        complexed with lda, so4
        
        region d:293-692 [157920]
  18. 6-aminohexanoate-dimer hydrolase NylC [160972]
    NylB'
    1. Flavobacterium sp. [TaxId: 239] [160973] (3)
      SQ P07062 5-392
      1. 2dcf
        complexed with aca, gol, mes, so4; mutant
        
        region a:5-392 [146485]
      2. 1wyc
        mutant
        
        region a:5-392 [145838]
      3. 1wyb
        
        region a:5-392 [145837]
2. Glutaminase [90084] (2)
  Pfam 04960
  1. Probable glutaminase YbgJ [90085]
    1. Bacillus subtilis [TaxId: 1423] [90086] (5)
      1. 1mki
        structural genomics
        complexed with edo, fmt, mse, sep; mutant
        
        chain a [84994]
        chain b [84995]
      2. 3brm
        automatically matched to d1mkia_
        complexed with onl
        
        region a:13-327 [155515]
      3. 3brm
        automatically matched to d1mkia_
        complexed with onl
        
        region b:13-327 [155516]
      4. 2osu
        automatically matched to d1mkia_
        complexed with don
        
        region a:0-327 [139301]
      5. 2osu
        automatically matched to d1mkia_
        complexed with don
        
        region b:0-327 [139302]
  2. Probable glutaminase YbaS [111291]
    1. Escherichia coli [TaxId: 562] [111292] (1)
      SQ P77454
      1. 1u60
        complexed with edo, fmt
        
        chain a [107692]
        chain b [107693]
        chain c [107694]
        chain d [107695]
3. Dac-like [144040] (3)
  Pfam 02113; D-Ala-D-Ala carboxypeptidase 3 (S13) family; contains a large insertion comprising two subdomains: (d1) aplha+beta with topological similarity to one subunit of the DTD-like family (scop_fa 69501) and (d2) six-stranded beta-sandwich with a crossed-loop topology
  1. Penicillin-binding protein DacC [144041]
    1. Bacillus subtilis [TaxId: 1423] [144042] (3)
      SQ P39844 34-491
      1. 1w5d
        complexed with ca
        
        region a:5-462 [120642]
      2. 2j9p
        automatically matched to d1w5da1
        complexed with rez
        
        region a:5-462 [147944]
      3. 2j9p
        automatically matched to d1w5da1
        complexed with rez
        
        region b:5-462 [147945]
  2. D-alanyl-D-alanine carboxypeptidase Dac [144043]
    1. Actinomadura sp. [TaxId: 1989] [144044] (12)
      SQ P39045 50-516
      1. 1w79
        complexed with mg, so4
        
        region a:1-467 [120680]
      2. 1w79
        automatically matched to 1W79 A:1-467
        complexed with mg, so4
        
        region b:1-466 [120681]
      3. 1w79
        automatically matched to 1W79 A:1-467
        complexed with mg, so4
        
        region c:1-466 [120682]
      4. 1w79
        automatically matched to 1W79 A:1-467
        complexed with mg, so4
        
        region d:1-467 [120683]
      5. 1w8y
        automatically matched to 1W79 A:1-467
        complexed with mg, ncf, so4
        
        region a:1-467 [120754]
      6. 1w8y
        automatically matched to 1W79 A:1-467
        complexed with mg, ncf, so4
        
        region b:1-466 [120755]
      7. 1w8y
        automatically matched to 1W79 A:1-467
        complexed with mg, ncf, so4
        
        region c:1-466 [120756]
      8. 1w8y
        automatically matched to 1W79 A:1-467
        complexed with mg, ncf, so4
        
        region d:1-467 [120757]
      9. 1w8q
        automatically matched to 1W79 A:1-467
        complexed with co, so4
        
        region a:1-467 [120730]
      10. 1w8q
        automatically matched to 1W79 A:1-467
        complexed with co, so4
        
        region b:1-466 [120731]
      11. 1w8q
        automatically matched to 1W79 A:1-467
        complexed with co, so4
        
        region c:1-466 [120732]
      12. 1w8q
        automatically matched to 1W79 A:1-467
        complexed with co, so4
        
        region d:1-467 [120733]
  3. DD-carboxypeptidase DacB [144045]
    Penicillin-binding protein 4
    1. Escherichia coli [TaxId: 562] [144046] (6)
      SQ P24228 22-477
      1. 2ex2
        complexed with gol
        
        region a:22-477 [132497]
      2. 2ex8
        automatically matched to 2EX2 A:22-477
        complexed with pnm
        
        region a:22-477 [132519]
      3. 2ex6
        automatically matched to 2EX2 A:22-477
        complexed with aic, gol
        
        region a:28-477 [132518]
      4. 2ex9
        automatically matched to 2EX2 A:22-477
        complexed with gol, pnv
        
        region a:28-477 [132520]
      5. 2exa
        automatically matched to 2EX2 A:22-477
        complexed with fro, gol
        
        region a:26-477 [132521]
      6. 2exb
        automatically matched to 2EX2 A:22-477
        complexed with fxm, gol
        
        region a:24-477 [132522]