Structural Classification of Proteins

Superfamily: beta-lactamase/transpeptidase-like

: uperfamily

Lineage:

Root: scop
Class: Multi-domain proteins (alpha and beta) [56572]
Folds consisting of two or more domains belonging to different classes
Fold: beta-lactamase/transpeptidase-like [56600]
contains a cluster of helices and an alpha+beta sandwich
Superfamily: beta-lactamase/transpeptidase-like [56601]
uperfamily

Families:

beta-Lactamase/D-ala carboxypeptidase [56602] (38)
1. D-ala carboxypeptidase/transpeptidase [56603]
  1. Streptomyces sp., K15 [TaxId: 1931] [56604] (7)
    1. 1es5
      mutant
      1. chain a [42679]
    2. 1es2
      mutant
      1. chain a [42680]
    3. 1j9m
      complexed with cl, na; mutant
      1. chain a [62764]
    4. 1esi
      mutant
      1. chain a [42682]
    5. 1es4
      mutant
      1. chain a [42683]
    6. 1skf
      1. chain a [42684]
    7. 1es3
      complexed with na; mutant
      1. chain a [42685]
  2. Streptomyces sp., R61 [TaxId: 1931] [56605] (15)
    SQ P15555 34-378 ! SQ P15555
    1. 1yqs
      automatically matched to d1cef__
      complexed with bsa, gol
      1. region a:3-347 [123899]
    2. 1pwg
      complexed with hel
      1. chain a [104340]
    3. 1mpl
      complexed with gol, re1
      1. chain a [79387]
    4. 1scw
      complexed with cp5, gol
      1. chain a [105423]
    5. 1pwc
      complexed with pnm
      1. chain a [104338]
    6. 1sde
      complexed with 2pb, gol
      1. chain a [112073]
    7. 1hvb
      complexed with ceh
      1. chain a [42686]
    8. 1pw1
      complexed with flh, gol, hel
      1. chain a [104334]
    9. 1pwd
      complexed with csc
      1. chain a [104339]
    10. 1iki
      complexed with dal, rey
      1. chain a [76751]
    11. 1pw8
      complexed with gol, h2a
      1. chain a [104337]
    12. 3pte
      1. chain a [42687]
    13. 1ceg
      complexed with cep
      1. chain a [42688]
    14. 1ikg
      complexed with rex
      1. chain a [76750]
    15. 1cef
      complexed with cef
      1. chain a [42689]
2. Esterase EstB [69873]
  1. Burkholderia gladioli [TaxId: 28095] [69874] (2)
    1. 1ci9
      complexed with dfp
      1. chain a [64767]
      2. chain b [64768]
    2. 1ci8
      complexed with ioh
      1. chain a [64765]
      2. chain b [64766]
3. beta-Lactamase, class A [56606]
  1. Escherichia coli, TEM-1 [TaxId: 562] [56607] (35)
    1. 1m40
      ultra high resolution structure
      complexed with cb4, k, po4; mutant
      1. chain a [74437]
    2. 1nym
      complexed with cxb, k, po4; mutant
      1. chain a [92344]
    3. 1li9
      TEM-34 variant
      complexed with k, po4; mutant
      1. chain a [77969]
    4. 1pzp
      complexed with fta; mutant
      1. chain a [95465]
    5. 1nxy
      complexed with k, sm2; mutant
      1. chain a [92313]
    6. 1zg4
      automatically matched to d1axb__
      1. region a:26-290 [125009]
    7. 1jvj
      complexed with im2, k; mutant
      1. chain a [71896]
    8. 1li0
      TEM-32 variant
      complexed with bct, k; mutant
      1. chain a [77968]
    9. 1ny0
      complexed with k, nbf, po4; mutant
      1. chain a [92314]
    10. 1btl
      complexed with so4
      1. chain a [42691]
    11. 2b5r
      mutant
      1. region a:26-288 [144952]
    12. 2b5r
      automatically matched to 2B5R A:26-288
      mutant
      1. region b:26-288 [144953]
    13. 1jtg
      complexed with ca; mutant
      1. chain a [67266]
      2. chain c [67268]
    14. 1jwz
      TEM-64 variant
      complexed with 105; mutant
      1. chain a [71922]
    15. 1jwp
      complexed with po4; mutant
      1. chain a [71917]
    16. 1jwv
      complexed with cb4, k; mutant
      1. chain a [71918]
    17. 1tem
      complexed with alp
      1. chain a [42692]
    18. 1erm
      complexed with bji
      1. chain a [42690]
    19. 1bt5
      complexed with im2, so4; mutant
      1. chain a [42693]
    20. 1fqg
      acyl-enzyme intermediate
      complexed with pnm; mutant
      1. chain a [42699]
    21. 1axb
      complexed with fos; mutant
      1. chain a [42695]
    22. 1xpb
      complexed with so4
      1. chain a [42694]
    23. 1nyy
      complexed with 105; mutant
      1. chain a [92362]
    24. 1pzo
      complexed with cbt; mutant
      1. chain a [95464]
    25. 1lhy
      TEM-30 variant
      complexed with po4; mutant
      1. chain a [77967]
    26. 1esu
      complexed with so4; mutant
      1. chain a [42696]
    27. 1ck3
      mutant
      1. chain a [42698]
    28. 1erq
      complexed with bjh
      1. chain a [42697]
    29. 1jtd
      complexed with ca
      1. chain a [67264]
    30. 3c7v
      automatically matched to d1axba_
      mutant
      1. region a:26-288 [156019]
    31. 3c7v
      automatically matched to d1axba_
      mutant
      1. region c:26-288 [156020]
    32. 3c7u
      automatically matched to d1axba_
      mutant
      1. region a:26-288 [156017]
    33. 3c7u
      automatically matched to d1axba_
      mutant
      1. region c:26-288 [156018]
    34. 1ero
      complexed with bjp
      1. chain a [42700]
    35. 1s0w
      complexed with ca; mutant
      1. chain a [98309]
      2. chain b [98310]
  2. Klebsiella pneumoniae, TEM52 [TaxId: 573] [64473] (1)
    1. 1htz
      mutant
      1. chain a [61262]
      2. chain b [61263]
      3. chain c [61264]
      4. chain d [61265]
      5. chain e [61266]
      6. chain f [61267]
  3. Escherichia coli, TOHO-1 [TaxId: 562] [56608] (5)
    1. 1iys
      complexed with so4
      1. chain a [90723]
    2. 1iyo
      complexed with cef, so4; mutant
      1. chain a [76970]
    3. 1bza
      complexed with so4; mutant
      1. chain a [42701]
    4. 1iyp
      complexed with cep, so4; mutant
      1. chain a [76971]
    5. 1iyq
      complexed with pnm, so4; mutant
      1. chain a [76972]
  4. Proteus vulgaris [TaxId: 585] [75596] (1)
    1. 1hzo
      complexed with mes
      1. chain a [71092]
      2. chain b [71093]
  5. Klebsiella pneumoniae, SHV-1 [TaxId: 573] [56609] (15)
    SQ Q5PSW7 ! SQ P14557 22-286
    inhibited by tazobactam
    1. 2zd8
      automatically matched to d1onga_
      complexed with ma4, mer
      1. region a:26-292 [154391]
    2. 1ong
      complexed with ma4, wy4
      1. chain a [93356]
    3. 2h5s
      automatically matched to d1onga_
      complexed with ma4, sa2
      1. region a:26-292 [136168]
    4. 2a3u
      automatically matched to d1rcja_
      complexed with epe, ma4, tsl; mutant
      1. region a:26-292 [126098]
    5. 2a49
      automatically matched to d1rcja_
      complexed with epe, ma4, tem; mutant
      1. region a:26-292 [126149]
    6. 1rcj
      complexed with ma4, tbi; mutant
      1. chain a [97293]
    7. 2g2u
      automatically matched to d1onga_
      1. region a:26-292 [134540]
    8. 3c4o
      automatically matched to d1onga_
      complexed with so4; mutant
      1. region a:26-292 [155934]
    9. 1tdl
      complexed with epe, ma4; mutant
      1. chain a [112398]
    10. 1tdg
      complexed with ma4, mdd, mpd, tbe; mutant
      1. chain a [112397]
    11. 3c4p
      automatically matched to d1onga_
      complexed with so4; mutant
      1. region a:26-292 [155935]
    12. 2g2w
      mutant
      1. region a:26-292 [145180]
    13. 1q2p
      complexed with ma4, wy2
      1. chain a [104501]
    14. 1vm1
      complexed with akr, ma4, taz, tbe
      1. chain a [108875]
    15. 1shv
      complexed with ma4
      1. chain a [42703]
  6. Klebsiella pneumoniae, SHV-2 [TaxId: 573] [90082] (1)
    almost identical sequence to SHV-1
    1. 1n9b
      complexed with epe, ma4, mpd
      1. chain a [85463]
  7. Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287] [56610] (2)
    1. 1g6a
      complexed with so4; mutant
      1. chain a [42704]
    2. 1g68
      complexed with so4
      1. chain a [42705]
  8. Staphylococcus aureus [TaxId: 1280] [56611] (16)
    1. 1ghp
      complexed with pnm, so4; mutant
      1. chain a [60520]
    2. 1dja
      mutant
      1. chain a [42706]
    3. 1ghm
      complexed with ced, co3, so4; mutant
      1. chain a [60519]
    4. 1kge
      mutant
      1. chain a [42708]
    5. 1djc
      complexed with so4; mutant
      1. chain a [42710]
    6. 3blm
      1. chain a [42709]
    7. 1djb
      mutant
      1. chain a [42711]
    8. 1kgf
      mutant
      1. chain a [42712]
    9. 1ghi
      complexed with co3; mutant
      1. chain a [60518]
    10. 1blh
      complexed with fos
      1. chain a [42713]
    11. 1kgg
      complexed with so4; mutant
      1. chain a [42715]
    12. 1blc
      complexed with cem, so4, tem
      1. chain a [42714]
    13. 1blp
      mutant
      1. chain a [42716]
    14. 1pio
      mutant
      1. chain a [42719]
      2. chain b [42720]
    15. 1alq
      circularly permuted
      complexed with co3, so4; mutant
      1. chain a [42707]
    16. 1ome
      omega loop deletion mutant (residues 163-178 deleted)
      1. chain a [42717]
      2. chain b [42718]
  9. Bacillus licheniformis [TaxId: 1402] [56612] (5)
    1. 1i2s
      complexed with cit, na
      1. chain a [71104]
      2. chain b [71105]
    2. 1i2w
      complexed with cfx, out
      1. chain a [71106]
      2. chain b [71107]
    3. 4blm
      1. chain a [42721]
      2. chain b [42722]
    4. 1mbl
      complexed with so4; mutant
      1. chain a [42723]
      2. chain b [42724]
    5. 2blm
      CA-atoms only
      1. chain a [42725]
      2. chain b [42726]
  10. Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550] [56613] (2)
    1. 1bue
      1. chain a [42727]
    2. 1bul
      complexed with ap3, mes
      1. chain a [42728]
  11. Streptomyces albus G [TaxId: 1962] [56614] (1)
    1. 1bsg
      complexed with act
      1. chain a [42729]
  12. Mycobacterium fortuitum [TaxId: 1766] [56615] (1)
    1. 2cc1
      automatically matched to d1mfoa_
      1. region a:27-293 [130211]
  13. Pseudomonas aeruginosa, PER-1 [TaxId: 287] [56616] (1)
    1. 1e25
      complexed with so4; mutant
      1. chain a [42731]
  14. Serratia marcescens, Sme-1 [TaxId: 615] [56617] (1)
    imipenem-hydrolyzing
    1. 1dy6
      1. chain a [42732]
      2. chain b [42733]
  15. Stenotrophomonas maltophilia, L2 [TaxId: 40324] [103374] (2)
    1. 1o7e
      complexed with gol, so4
      1. chain a [92622]
      2. chain b [92623]
    2. 1n4o
      complexed with so4
      1. chain a [91621]
      2. chain b [91622]
4. AMPC beta-Lactamase, class C [56618]
  contains small alpha+beta subdomain inserted in the common fold
  1. Citrobacter freundii [TaxId: 546] [56619] (3)
    1. 1rgy
      complexed with mpd, ptx
      1. chain a [97456]
    2. 1fr1
      1. chain a [42734]
      2. chain b [42735]
    3. 1fr6
      complexed with azr
      1. chain a [42736]
      2. chain b [42737]
  2. Enterobacter cloacae, P99, cephalosporinase [TaxId: 550] [56620] (10)
    SQ P05364 22-380 ! SQ P05364 22-381
    1. 1onh
      complexed with gol, wy4
      1. chain a [93357]
    2. 1rgz
      complexed with gol, ptx
      1. chain a [97457]
    3. 1q2q
      complexed with gol, wy2
      1. chain a [104502]
    4. 1ga0
      complexed with dvr, gol, na
      1. chain a [60410]
    5. 1gce
      1. chain a [42738]
    6. 1xx2
      1. chain a [116136]
      2. chain b [116137]
    7. 2q9m
      automatically matched to d1blsa_
      complexed with lk7
      1. region a:2-360 [150147]
    8. 1bls
      complexed with ipp
      1. chain a [42741]
      2. chain b [42742]
    9. 2q9n
      automatically matched to d1blsa_
      complexed with lk5
      1. region a:2-360 [150148]
    10. 1s6r
      complexed with iap
      1. chain a [98604]
  3. Escherichia coli, cephalosporinase [TaxId: 562] [56621] (60)
    1. 2hds
      automatically matched to d1c3ba_
      complexed with 4mb, na, po4, suc
      1. region a:4-361 [136350]
    2. 2hds
      automatically matched to d1c3ba_
      complexed with 4mb, na, po4, suc
      1. region b:4-361 [136351]
    3. 2ffy
      automatically matched to d1pi4a_
      complexed with k, po4, sm3; mutant
      1. region a:4-361 [133394]
    4. 2ffy
      automatically matched to d1pi4a_
      complexed with k, po4, sm3; mutant
      1. region b:4-361 [133395]
    5. 1pi4
      complexed with k, po4, sm3; mutant
      1. chain a [94700]
      2. chain b [94701]
    6. 2hdu
      automatically matched to d1c3ba_
      complexed with f12, k, po4
      1. region a:4-361 [136352]
    7. 2hdu
      automatically matched to d1c3ba_
      complexed with f12, k, po4
      1. region b:4-361 [136353]
    8. 1pi5
      complexed with k, po4, sm2; mutant
      1. chain a [94702]
      2. chain b [94703]
    9. 1l0g
      complexed with po4, suc; mutant
      1. chain a [73400]
      2. chain b [73401]
    10. 1l0d
      complexed with po4; mutant
      1. chain a [73394]
      2. chain b [73395]
    11. 1kvl
      complexed with cls, kcp, po4, thn; mutant
      1. chain a [73062]
      2. chain b [73063]
    12. 1l0f
      complexed with po4; mutant
      1. chain a [73398]
      2. chain b [73399]
    13. 1my8
      complexed with po4, sm3
      1. chain a [85236]
      2. chain b [85237]
    14. 2r9w
      automatically matched to d1c3ba_
      complexed with 23c, po4
      1. region a:4-361 [151806]
    15. 2r9w
      automatically matched to d1c3ba_
      complexed with 23c, po4
      1. region b:4-361 [151807]
    16. 1llb
      complexed with pcn
      1. chain a [78092]
      2. chain b [78093]
    17. 2p9v
      automatically matched to d1c3ba_
      complexed with po4
      1. region a:4-361 [149335]
    18. 2p9v
      automatically matched to d1c3ba_
      complexed with po4
      1. region b:4-361 [149336]
    19. 1ke4
      complexed with po4
      1. chain a [72362]
      2. chain b [72363]
    20. 1fsy
      complexed with 105, po4
      1. chain a [60016]
      2. chain b [60017]
    21. 1i5q
      complexed with mox; mutant
      1. chain a [61820]
      2. chain b [61821]
    22. 2r9x
      automatically matched to d1c3ba_
      complexed with dms, po4, wh6
      1. region a:4-361 [151808]
    23. 2r9x
      automatically matched to d1c3ba_
      complexed with dms, po4, wh6
      1. region b:4-361 [151809]
    24. 1l0e
      complexed with po4; mutant
      1. chain a [73396]
      2. chain b [73397]
    25. 2pu2
      automatically matched to d1c3ba_
      complexed with dk2, po4
      1. region a:4-361 [149850]
    26. 2pu2
      automatically matched to d1c3ba_
      complexed with dk2, po4
      1. region b:4-361 [149851]
    27. 1mxo
      complexed with po4, sm2
      1. chain a [85195]
      2. chain b [85196]
    28. 1o07
      complexed with k, mxg; mutant
      1. chain a [92390]
      2. chain b [92391]
    29. 1l2s
      complexed with stc
      1. chain a [73512]
      2. chain b [73513]
    30. 1ll9
      complexed with axl
      1. chain a [78090]
      2. chain b [78091]
    31. 1fsw
      complexed with ctb, po4
      1. chain a [60010]
      2. chain b [60011]
    32. 1ll5
      complexed with im2
      1. chain a [78075]
      2. chain b [78076]
    33. 1xgj
      automatically matched to d1c3ba_
      complexed with htc
      1. region a:4-361 [121978]
    34. 1xgj
      automatically matched to d1c3ba_
      complexed with htc
      1. region b:4-361 [121979]
    35. 1xgi
      automatically matched to d1c3ba_
      complexed with nst
      1. region a:4-361 [121976]
    36. 1xgi
      automatically matched to d1c3ba_
      complexed with nst
      1. region b:4-361 [121977]
    37. 2rcx
      automatically matched to d1c3ba_
      complexed with po4, sm4
      1. region a:4-361 [151913]
    38. 2rcx
      automatically matched to d1c3ba_
      complexed with po4, sm4
      1. region b:4-361 [151914]
    39. 1iel
      complexed with caz, po4
      1. chain a [62329]
      2. chain b [62330]
    40. 1kvm
      complexed with ceo, po4
      1. chain a [73064]
      2. chain b [73065]
    41. 2pu4
      automatically matched to d1c3ba_
      complexed with dms, ox6, ox7, so4
      1. region a:4-361 [149852]
    42. 2pu4
      automatically matched to d1c3ba_
      complexed with dms, ox6, ox7, so4
      1. region b:4-361 [149853]
    43. 2hdq
      automatically matched to d1c3ba_
      complexed with c21
      1. region a:4-361 [136346]
    44. 2hdq
      automatically matched to d1c3ba_
      complexed with c21
      1. region b:4-361 [136347]
    45. 2hdr
      automatically matched to d1c3ba_
      complexed with 4a3, po4
      1. region a:4-361 [136348]
    46. 2hdr
      automatically matched to d1c3ba_
      complexed with 4a3, po4
      1. region b:4-361 [136349]
    47. 2i72
      automatically matched to d1c3ba_
      complexed with va1
      1. region a:4-361 [147533]
    48. 2i72
      automatically matched to d1c3ba_
      complexed with va1
      1. region b:4-361 [147534]
    49. 1ke3
      complexed with bdb, po4
      1. chain a [72360]
      2. chain b [72361]
    50. 1iem
      complexed with cb4, po4
      1. chain a [62331]
      2. chain b [62332]
    51. 1ga9
      complexed with etp, k, po4
      1. chain a [60414]
      2. chain b [60415]
    52. 1kds
      complexed with npb
      1. chain a [72354]
      2. chain b [72355]
    53. 1kdw
      complexed with 4cb, po4
      1. chain a [72356]
      2. chain b [72357]
    54. 1c3b
      1. chain a [42743]
      2. chain b [42744]
    55. 1ke0
      complexed with cvb, po4
      1. chain a [72358]
      2. chain b [72359]
    56. 1fco
      complexed with mox; mutant
      1. chain a [42749]
      2. chain b [42750]
    57. 3bls
      complexed with apb
      1. chain a [42745]
      2. chain b [42746]
    58. 1fcn
      complexed with lor; mutant
      1. chain a [42751]
      2. chain b [42752]
    59. 2bls
      1. chain a [42747]
      2. chain b [42748]
    60. 1fcm
      complexed with cxn; mutant
      1. chain a [42753]
      2. chain b [42754]
5. Class D beta-lactamase [56622]
  1. Escherichia coli, OXA-1 [TaxId: 562] [82837] (1)
    1. 1m6k
      complexed with kcx, mpd
      1. chain a [78695]
      2. chain b [78696]
  2. Salmonella typhimurium, OXA-2 [TaxId: 90371] [90083] (1)
    1. 1k38
      complexed with fmt, kcx
      1. chain a [84303]
      2. chain b [84304]
  3. Pseudomonas aeruginosa, OXA-10 [TaxId: 287] [56623] (12)
    1. 1k55
      complexed with edo, sul
      1. chain a [68156]
      2. chain b [68157]
      3. chain c [68158]
      4. chain d [68159]
    2. 1e3u
      complexed with auc, edo, so4
      1. chain a [42755]
      2. chain b [42756]
      3. chain c [42757]
      4. chain d [42758]
    3. 1k4f
      complexed with so4
      1. chain a [68138]
      2. chain b [68139]
    4. 1k54
      complexed with edo, hoq, sul
      1. chain a [68152]
      2. chain b [68153]
      3. chain c [68154]
      4. chain d [68155]
    5. 1k56
      complexed with sul
      1. chain a [68160]
      2. chain b [68161]
      3. chain c [68162]
      4. chain d [68163]
    6. 1e4d
      complexed with edo, so4
      1. chain a [42759]
      2. chain b [42760]
      3. chain c [42761]
      4. chain d [42762]
    7. 1k57
      complexed with so4
      1. chain a [68164]
      2. chain b [68165]
      3. chain c [68166]
      4. chain d [68167]
    8. 1fof
      complexed with co, so4
      1. chain a [42763]
      2. chain b [42764]
    9. 1k6s
      complexed with ca, iap, kcx, so4
      1. chain a [84307]
      2. chain b [84308]
    10. 1k4e
      complexed with so4
      1. chain a [68136]
      2. chain b [68137]
    11. 1k6r
      complexed with mxl
      1. chain a [84305]
      2. chain b [84306]
    12. 1ewz
      1. chain a [42765]
      2. chain b [42766]
      3. chain c [42767]
      4. chain d [42768]
  4. Pseudomonas aeruginosa, OXA-13 [TaxId: 287] [64474] (3)
    1. 1h8z
      complexed with so4
      1. chain a [60803]
      2. chain b [60804]
    2. 1h5x
      complexed with im2, so4
      1. chain a [70899]
      2. chain b [70900]
    3. 1h8y
      complexed with mer, so4
      1. chain a [60801]
      2. chain b [60802]
6. Penicillin receptor BlaR, C-terminal domain [103375]
  closely related to class D beta-lactamase
  1. Bacillus licheniformis [TaxId: 1402] [103376] (1)
    1. 1nrf
      1. chain a [92086]
7. Penicillin-binding protein 2x (pbp-2x), transpeptidase domain [56624]
  1. Streptococcus pneumoniae [TaxId: 1313] [56625] (14)
    1. 1qme
      complexed with so4
      1. region a:264-620 [42769]
    2. 1pyy
      complexed with mpd, osu, so4; mutant
      1. region a:264-631 [95388]
    3. 2z2m
      automatically matched to d1pmda4
      complexed with cds, so4
      1. region b:264-620 [153943]
    4. 2z2m
      automatically matched to d1pmda4
      complexed with cds, so4
      1. region e:264-620 [153946]
    5. 2zc3
      automatically matched to d1pmda4
      complexed with bmg, so4
      1. region b:264-619 [154324]
    6. 2zc3
      automatically matched to d1pmda4
      complexed with bmg, so4
      1. region e:264-620 [154327]
    7. 1qmf
      complexed with ces, kef
      1. region a:264-620 [42770]
    8. 2zc4
      automatically matched to d1pmda4
      complexed with so4, teb
      1. region b:264-619 [154330]
    9. 2zc4
      automatically matched to d1pmda4
      complexed with so4, teb
      1. region e:264-620 [154333]
    10. 2z2l
      automatically matched to d1pmda4
      complexed with so4
      1. region b:264-620 [153937]
    11. 2z2l
      automatically matched to d1pmda4
      complexed with so4
      1. region e:264-620 [153940]
    12. 1rp5
      complexed with so4
      1. region a:264-631 [97697]
      2. region b:264-631 [97701]
    13. 1k25
      mutant
      1. region a:264-631 [68036]
      2. region b:1264-1631 [68040]
      3. region c:2264-2631 [68044]
      4. region d:3264-3612 [68048]
    14. 1pmd
      CA-atoms only
      1. region a:264-630 [42771]
8. Penicillin binding protein 2a (PBP2A), C-terminal domain [82838]
  1. Staphylococcus aureus [TaxId: 1280] [82839] (5)
    SQ O54286 27-668
    1. 1vqq
      complexed with cd, cl; mutant
      1. region a:328-668 [114011]
      2. region b:328-668 [114014]
    2. 1mws
      complexed with cd, cl, nc1; mutant
      1. region a:328-668 [79594]
      2. region b:328-668 [79597]
    3. 1mwt
      complexed with cd, cl, pg1; mutant
      1. region a:328-668 [79600]
      2. region b:328-668 [79603]
    4. 1mwu
      complexed with cd, cl, mc1; mutant
      1. region a:328-668 [79606]
      2. region b:328-668 [79609]
    5. 1mwr
      complexed with cd, cl, mse; mutant
      1. region a:328-668 [79588]
      2. region b:328-668 [79591]
9. Penicillin-binding protein 5, N-terminal domain [69875]
  1. Escherichia coli [TaxId: 562] [69876] (8)
    1. 3bec
      automatically matched to d1hd8a2
      complexed with gol, hj2
      1. region a:4-262 [155182]
    2. 1z6f
      automatically matched to d1hd8a2
      complexed with bo9, gol
      1. region a:4-262 [124521]
    3. 1nzo
      complexed with bme
      1. region a:4-262 [92384]
    4. 1nj4
      mutant
      1. region a:3-262 [80546]
    5. 1nzu
      complexed with bme
      1. region a:3-262 [92389]
    6. 3beb
      automatically matched to d1hd8a2
      complexed with gol, hj3
      1. region a:4-262 [155180]
    7. 1hd8
      mutant
      1. region a:3-262 [65804]
    8. 1sdn
      automatically matched to d1hd8a2
      complexed with hg; mutant
      1. region a:3-262 [118950]
10. D-aminopeptidase, N-terminal domain [56626]
  1. Ochrobactrum anthropi [TaxId: 529] [56627] (1)
    1. 1ei5
      1. region a:3-335 [42772]
11. Pencillin binding protein 4 (PbpD), N-terminal domain [111287]
  1. Staphylococcus aureus [TaxId: 1280] [111288] (1)
    SQ Q53613 21-383
    1. 1tvf
      Structural genomics target
      complexed with so4, unl
      1. region a:15-315 [107359]
      2. region b:15-315 [107361]
12. Regulatory protein BlaR1 [111289]
  1. Staphylococcus aureus [TaxId: 1280] [111290] (3)
    SQ P18357 338-582 ! SQ P18357 334-581 ! SQ P18357 338-583
    1. 1xkz
      complexed with caz, epe, so4
      1. chain a [115426]
      2. chain b [115427]
      3. chain c [115428]
      4. chain d [115429]
    2. 1xa1
      complexed with po4, pop
      1. chain a [109529]
      2. chain b [109530]
      3. chain c [109531]
      4. chain d [109532]
    3. 1xa7
      complexed with pg1
      1. chain a [109533]
      2. chain b [109534]
13. D,D-carboxypeptidase DacA, N-terminal domain [118181]
  1. Streptococcus pneumoniae [TaxId: 1313] [118182] (1)
    SQ P72518 25-393
    1. 1xp4
      complexed with iod, so4
      1. region a:25-293 [115723]
      2. region b:25-293 [115725]
      3. region c:25-293 [115727]
      4. region d:25-293 [115729]
14. Penicillin-binding protein 1a, transpeptidase domain [144034]
  1. Streptococcus pneumoniae [TaxId: 1313] [144035] (2)
    SQ Q8DR59 266-650! SQ Q8DR59 267-650
    1. 2c5w
      complexed with cl, edo, pcz, zn
      1. region b:266-650 [129958]
    2. 2c6w
      complexed with cl, zn
      1. region b:267-650 [130010]
15. Penicillin-binding protein 1b, transpeptidase domain [144036]
  1. Streptococcus pneumoniae [TaxId: 1313] [144037] (3)
    SQ O70038 337-789! SQ O70038 337-791
    1. 2bg1
      complexed with cl, so4; mutant
      1. region a:337-789 [128457]
    2. 2fff
      complexed with ni
      1. region b:337-789 [133382]
    3. 2uwx
      automatically matched to 2BG3 A:337-791
      complexed with cl, edo, nc1, so4; mutant
      1. region a:337-790 [140002]
16. D-Amino acid amidase DaaA [144038]
  1. Ochrobactrum anthropi [TaxId: 529] [144039] (24)
    SQ Q9LCC8 2-363
    1. 2drw
      complexed with ba
      1. region a:2-363 [131674]
    2. 2drw
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region b:2-363 [131675]
    3. 2drw
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region c:3-363 [131676]
    4. 2drw
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region d:2-363 [131677]
    5. 2drw
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region e:2-363 [131678]
    6. 2drw
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region f:7-358 [131679]
    7. 2efu
      automatically matched to 2DRW A:2-363
      complexed with ba, phe
      1. region a:2-363 [132109]
    8. 2efu
      automatically matched to 2DRW A:2-363
      complexed with ba, phe
      1. region b:4-363 [132110]
    9. 2efu
      automatically matched to 2DRW A:2-363
      complexed with ba, phe
      1. region c:3-363 [132111]
    10. 2efu
      automatically matched to 2DRW A:2-363
      complexed with ba, phe
      1. region d:2-363 [132112]
    11. 2efu
      automatically matched to 2DRW A:2-363
      complexed with ba, phe
      1. region e:2-363 [132113]
    12. 2efu
      automatically matched to 2DRW A:2-363
      complexed with ba, phe
      1. region f:4-358 [132114]
    13. 2efx
      automatically matched to 2DRW A:2-363
      complexed with ba, nfa
      1. region a:2-363 [132115]
    14. 2efx
      automatically matched to 2DRW A:2-363
      complexed with ba, nfa
      1. region b:2-363 [132116]
    15. 2efx
      automatically matched to 2DRW A:2-363
      complexed with ba, nfa
      1. region c:3-363 [132117]
    16. 2efx
      automatically matched to 2DRW A:2-363
      complexed with ba, nfa
      1. region d:2-363 [132118]
    17. 2efx
      automatically matched to 2DRW A:2-363
      complexed with ba, nfa
      1. region e:2-363 [132119]
    18. 2efx
      automatically matched to 2DRW A:2-363
      complexed with ba, nfa
      1. region f:9-361 [132120]
    19. 2dns
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region a:2-363 [131587]
    20. 2dns
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region b:2-363 [131588]
    21. 2dns
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region c:3-362 [131589]
    22. 2dns
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region d:2-362 [131590]
    23. 2dns
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region e:2-361 [131591]
    24. 2dns
      automatically matched to 2DRW A:2-363
      complexed with ba
      1. region f:8-358 [131592]
17. Penicillin-binding protein 2, PBP2 [160970]
  1. Staphylococcus aureus [TaxId: 1280] [160971] (7)
    SQ Q2YY56 293-692
    1. 2olu
      automatically matched to 2OLV A:293-692
      complexed with edo
      1. region a:293-692 [148820]
    2. 2olv
      complexed with m0e
      1. region a:293-692 [148822]
    3. 2olv
      automatically matched to 2OLV A:293-692
      complexed with m0e
      1. region b:293-692 [148824]
    4. 3dwk
      automatically matched to 2OLV A:293-692
      complexed with lda, so4
      1. region a:296-692 [157914]
    5. 3dwk
      automatically matched to 2OLV A:293-692
      complexed with lda, so4
      1. region b:293-692 [157916]
    6. 3dwk
      automatically matched to 2OLV A:293-692
      complexed with lda, so4
      1. region c:293-692 [157918]
    7. 3dwk
      automatically matched to 2OLV A:293-692
      complexed with lda, so4
      1. region d:293-692 [157920]
18. 6-aminohexanoate-dimer hydrolase NylC [160972]
  NylB'
  1. Flavobacterium sp. [TaxId: 239] [160973] (3)
    SQ P07062 5-392
    1. 2dcf
      complexed with aca, gol, mes, so4; mutant
      1. region a:5-392 [146485]
    2. 1wyc
      mutant
      1. region a:5-392 [145838]
    3. 1wyb
      1. region a:5-392 [145837]
Glutaminase [90084] (2)
Pfam 04960
1. Probable glutaminase YbgJ [90085]
  1. Bacillus subtilis [TaxId: 1423] [90086] (5)
    1. 1mki
      structural genomics
      complexed with edo, fmt, mse, sep; mutant
      1. chain a [84994]
      2. chain b [84995]
    2. 3brm
      automatically matched to d1mkia_
      complexed with onl
      1. region a:13-327 [155515]
    3. 3brm
      automatically matched to d1mkia_
      complexed with onl
      1. region b:13-327 [155516]
    4. 2osu
      automatically matched to d1mkia_
      complexed with don
      1. region a:0-327 [139301]
    5. 2osu
      automatically matched to d1mkia_
      complexed with don
      1. region b:0-327 [139302]
2. Probable glutaminase YbaS [111291]
  1. Escherichia coli [TaxId: 562] [111292] (1)
    SQ P77454
    1. 1u60
      complexed with edo, fmt
      1. chain a [107692]
      2. chain b [107693]
      3. chain c [107694]
      4. chain d [107695]
Dac-like [144040] (3)
Pfam 02113; D-Ala-D-Ala carboxypeptidase 3 (S13) family; contains a large insertion comprising two subdomains: (d1) aplha+beta with topological similarity to one subunit of the DTD-like family (scop_fa 69501) and (d2) six-stranded beta-sandwich with a crossed-loop topology
1. Penicillin-binding protein DacC [144041]
  1. Bacillus subtilis [TaxId: 1423] [144042] (3)
    SQ P39844 34-491
    1. 1w5d
      complexed with ca
      1. region a:5-462 [120642]
    2. 2j9p
      automatically matched to d1w5da1
      complexed with rez
      1. region a:5-462 [147944]
    3. 2j9p
      automatically matched to d1w5da1
      complexed with rez
      1. region b:5-462 [147945]
2. D-alanyl-D-alanine carboxypeptidase Dac [144043]
  1. Actinomadura sp. [TaxId: 1989] [144044] (12)
    SQ P39045 50-516
    1. 1w79
      complexed with mg, so4
      1. region a:1-467 [120680]
    2. 1w79
      automatically matched to 1W79 A:1-467
      complexed with mg, so4
      1. region b:1-466 [120681]
    3. 1w79
      automatically matched to 1W79 A:1-467
      complexed with mg, so4
      1. region c:1-466 [120682]
    4. 1w79
      automatically matched to 1W79 A:1-467
      complexed with mg, so4
      1. region d:1-467 [120683]
    5. 1w8y
      automatically matched to 1W79 A:1-467
      complexed with mg, ncf, so4
      1. region a:1-467 [120754]
    6. 1w8y
      automatically matched to 1W79 A:1-467
      complexed with mg, ncf, so4
      1. region b:1-466 [120755]
    7. 1w8y
      automatically matched to 1W79 A:1-467
      complexed with mg, ncf, so4
      1. region c:1-466 [120756]
    8. 1w8y
      automatically matched to 1W79 A:1-467
      complexed with mg, ncf, so4
      1. region d:1-467 [120757]
    9. 1w8q
      automatically matched to 1W79 A:1-467
      complexed with co, so4
      1. region a:1-467 [120730]
    10. 1w8q
      automatically matched to 1W79 A:1-467
      complexed with co, so4
      1. region b:1-466 [120731]
    11. 1w8q
      automatically matched to 1W79 A:1-467
      complexed with co, so4
      1. region c:1-466 [120732]
    12. 1w8q
      automatically matched to 1W79 A:1-467
      complexed with co, so4
      1. region d:1-467 [120733]
3. DD-carboxypeptidase DacB [144045]
  Penicillin-binding protein 4
  1. Escherichia coli [TaxId: 562] [144046] (6)
    SQ P24228 22-477
    1. 2ex2
      complexed with gol
      1. region a:22-477 [132497]
    2. 2ex8
      automatically matched to 2EX2 A:22-477
      complexed with pnm
      1. region a:22-477 [132519]
    3. 2ex6
      automatically matched to 2EX2 A:22-477
      complexed with aic, gol
      1. region a:28-477 [132518]
    4. 2ex9
      automatically matched to 2EX2 A:22-477
      complexed with gol, pnv
      1. region a:28-477 [132520]
    5. 2exa
      automatically matched to 2EX2 A:22-477
      complexed with fro, gol
      1. region a:26-477 [132521]
    6. 2exb
      automatically matched to 2EX2 A:22-477
      complexed with fxm, gol
      1. region a:24-477 [132522]