Structural Classification of Proteins

Superfamily: Bcl-2 inhibitors of programmed cell death

: PROVISIONAL CLASSIFICATION, based on structural similarity to the diphtheria toxin domain
uperfamily

Lineage:

Root: scop
Class: Membrane and cell surface proteins and peptides [56835]
Does not include proteins in the immune system
Fold: Toxins' membrane translocation domains [56836]
multi-helical domains of various folds which is thought to unfold in the membrane
Superfamily: Bcl-2 inhibitors of programmed cell death [56854]
PROVISIONAL CLASSIFICATION, based on structural similarity to the diphtheria toxin domain
uperfamily

Families:

Bcl-2 inhibitors of programmed cell death [56855] (13)
Pfam 00452
1. Bcl-2 [64524]
  1. Human (Homo sapiens) [TaxId: 9606] [64525] (5)
    1. 1g5m
      isoform 1
      1. chain a [60286]
    2. 1gjh
      isoform 2
      1. chain a [60575]
    3. 2o22
      automatically matched to d1gjha_
      complexed with liu
      1. region a:1-204 [138883]
    4. 1ysw
      automatically matched to d1gjha_
      complexed with 43b
      1. region a:1-204 [123984]
    5. 2o21
      automatically matched to d1gjha_
      complexed with 43b
      1. region a:1-204 [138882]
2. Apoptosis regulator Bcl-xL [56856]
  1. Human (Homo sapiens) [TaxId: 9606] [56857] (15)
    1. 1r2d
      1. chain a [96864]
    2. 1r2i
      mutant
      1. chain a [96868]
    3. 1r2h
      mutant
      1. chain a [96867]
    4. 1r2e
      mutant
      1. chain a [96865]
    5. 1maz
      1. chain a [43393]
    6. 1r2g
      mutant
      1. chain a [96866]
    7. 2b48
      automatically matched to d1maz__
      1. region a:1-196 [127816]
    8. 2pon
      automatically matched to d1g5ja_
      1. region b:57-212 [149723]
    9. 1bxl
      1. chain a [43396]
    10. 1ysn
      automatically matched to d1bxla_
      complexed with 43b
      1. region a:1-213 [123980]
    11. 2o1y
      automatically matched to d1bxla_
      complexed with 43b
      1. region a:1-213 [138881]
    12. 1ysg
      automatically matched to d1bxla_
      complexed with 4fc, tn1
      1. region a:1-213 [123973]
    13. 1ysi
      automatically matched to d1bxla_
      complexed with n3b
      1. region a:1-213 [123974]
    14. 1g5j
      complex with peptide from Bad (CH B)
      mutant
      1. chain a [43394]
    15. 1lxl
      1. chain a [43395]
  2. Mouse (Mus musculus) [TaxId: 10090] [103423] (3)
    1. 1pq1
      complexed with bim peptide, chain B
      1. chain a [94986]
    2. 1pq0
      1. chain a [94985]
    3. 2bzw
      automatically matched to d1pq1a_
      1. region a:2-196 [129562]
  3. Rat (Rattus norvegicus) [TaxId: 10116] [56858] (1)
    1. 1af3
      1. chain a [43397]
3. Apoptosis regulator Bcl-w [90103]
  1. Human (Homo sapiens) [TaxId: 9606] [90104] (3)
    1. 1zy3
      automatically matched to d1mk3a_
      mutant
      1. region a:1-170 [125812]
    2. 1o0l
      mutant
      1. chain a [86534]
    3. 1mk3
      mutant
      1. chain a [84978]
4. Proapoptotic molecule Bid [56859]
  1. Human (Homo sapiens) [TaxId: 9606] [56860] (1)
    1. 2bid
      1. chain a [43398]
  2. Mouse (Mus musculus) [TaxId: 10090] [56861] (1)
    1. 1ddb
      1. chain a [43399]
5. Proapoptotic molecule Bax [56862]
  1. Human (Homo sapiens) [TaxId: 9606] [56863] (2)
    1. 1f16
      1. chain a [43400]
    2. 2k7w
      automatically matched to d1f16a_
      1. region a:1-192 [148280]
6. Bcl-2 homolog [75637]
  1. Kaposi's sarcoma-associated herpesvirus [TaxId: 37296] [75638] (1)
    1. 1k3k
      mutant
      1. chain a [72017]
7. Apoptosis regulator ced-9 [103424]
  1. Nematode (Caenorhabditis elegans) [TaxId: 6239] [103425] (3)
    SQ P41958 74-237
    1. 1ohu
      mutant
      1. chain a [93029]
      2. chain b [93030]
    2. 1ty4
      complexed with the activator egl-1 peptide (SQ O61667 48-76), chains C and D
      1. chain a [107452]
      2. chain b [107453]
    3. 2a5y
      automatically matched to d1ohua_
      complexed with atp, mg; mutant
      1. region a:71-241 [126183]
8. Early antigen protein R [103426]
  1. Epstein-Barr virus [TaxId: 10376] [103427] (1)
    1. 1q59
      1. chain a [95881]
9. EAT/MCL-1 (Myeloid cell leukemia sequence 1) [118212]
  1. Mouse (Mus musculus) [TaxId: 10090] [118213] (4)
    SQ P97287 152-308
    1. 2jm6
      automatically matched to d1wsxa_
      1. region b:147-308 [138356]
    2. 2rod
      automatically matched to d1wsxa_
      1. region a:147-308 [152177]
    3. 2roc
      automatically matched to d1wsxa_
      mutant
      1. region a:147-308 [152176]
    4. 1wsx
      1. chain a [114867]
10. Bcl-2 homolog V-bcl-2 [144081]
  1. Murid herpesvirus 4 [TaxId: 33708] [144082] (5)
    SQ P89884 6-136
    1. 3bl2
      automatically matched to d2aboa1
      1. region a:6-134 [155376]
    2. 3bl2
      automatically matched to d2aboa1
      1. region b:6-134 [155377]
    3. 3dvu
      automatically matched to d2aboa1
      1. region a:6-134 [157906]
    4. 3dvu
      automatically matched to d2aboa1
      1. region b:6-134 [157907]
    5. 2abo
      1. region a:6-136 [126527]