Family: Bcl-2 inhibitors of programmed cell death

Pfam 00452

Lineage:

1. Root: scop
2. Class: Membrane and cell surface proteins and peptides [56835]
   Does not include proteins in the immune system
3. Fold: Toxins' membrane translocation domains [56836]
   multi-helical domains of various folds which is thought to unfold in the membrane
4. Superfamily: Bcl-2 inhibitors of programmed cell death [56854]
   PROVISIONAL CLASSIFICATION, based on structural similarity to the diphtheria toxin domain
   uperfamily
5. Family: Bcl-2 inhibitors of programmed cell death [56855]
   Pfam 00452

Protein Domains:

1. Bcl-2 [64524]
   1. Human (Homo sapiens) [TaxId: 9606] [64525] (5)
      1. 1g5m
         isoform 1
         1. chain a [60286]
      2. 1gjh
         isoform 2
         1. chain a [60575]
      3. 2o22
         automatically matched to d1gjha_
         complexed with liu
         1. region a:1-204 [138883]
      4. 1ysw
         automatically matched to d1gjha_
         complexed with 43b
         1. region a:1-204 [123984]
      5. 2o21
         automatically matched to d1gjha_
         complexed with 43b
         1. region a:1-204 [138882]
2. Apoptosis regulator Bcl-xL [56856]
   1. Human (Homo sapiens) [TaxId: 9606] [56857] (15)
      1. 1r2d
         1. chain a [96864]
      2. 1r2i
         mutant
         1. chain a [96868]
      3. 1r2h
         mutant
         1. chain a [96867]
      4. 1r2e
         mutant
         1. chain a [96865]
      5. 1maz
         1. chain a [43393]
      6. 1r2g
         mutant
         1. chain a [96866]
      7. 2b48
         automatically matched to d1maz__
         1. region a:1-196 [127816]
      8. 2pon
         automatically matched to d1g5ja_
         1. region b:57-212 [149723]
      9. 1bxl
         1. chain a [43396]
      10. 1ysn
          automatically matched to d1bxla_
          complexed with 43b
          1. region a:1-213 [123980]
      11. 2o1y
          automatically matched to d1bxla_
          complexed with 43b
          1. region a:1-213 [138881]
      12. 1ysg
          automatically matched to d1bxla_
          complexed with 4fc, tn1
          1. region a:1-213 [123973]
      13. 1ysi
          automatically matched to d1bxla_
          complexed with n3b
          1. region a:1-213 [123974]
      14. 1g5j
          complex with peptide from Bad (CH B)
          mutant
          1. chain a [43394]
      15. 1lxl
          1. chain a [43395]
   2. Mouse (Mus musculus) [TaxId: 10090] [103423] (3)
      1. 1pq1
         complexed with bim peptide, chain B
         1. chain a [94986]
      2. 1pq0
         1. chain a [94985]
      3. 2bzw
         automatically matched to d1pq1a_
         1. region a:2-196 [129562]
   3. Rat (Rattus norvegicus) [TaxId: 10116] [56858] (1)
      1. 1af3
         1. chain a [43397]
3. Apoptosis regulator Bcl-w [90103]
   1. Human (Homo sapiens) [TaxId: 9606] [90104] (3)
      1. 1zy3
         automatically matched to d1mk3a_
         mutant
         1. region a:1-170 [125812]
      2. 1o0l
         mutant
         1. chain a [86534]
      3. 1mk3
         mutant
         1. chain a [84978]
4. Proapoptotic molecule Bid [56859]
   1. Human (Homo sapiens) [TaxId: 9606] [56860] (1)
      1. 2bid
         1. chain a [43398]
   2. Mouse (Mus musculus) [TaxId: 10090] [56861] (1)
      1. 1ddb
         1. chain a [43399]
5. Proapoptotic molecule Bax [56862]
   1. Human (Homo sapiens) [TaxId: 9606] [56863] (2)
      1. 1f16
         1. chain a [43400]
      2. 2k7w
         automatically matched to d1f16a_
         1. region a:1-192 [148280]
6. Bcl-2 homolog [75637]
   1. Kaposi's sarcoma-associated herpesvirus [TaxId: 37296] [75638] (1)
      1. 1k3k
         mutant
         1. chain a [72017]
7. Apoptosis regulator ced-9 [103424]
   1. Nematode (Caenorhabditis elegans) [TaxId: 6239] [103425] (3)
      SQ P41958 74-237
      1. 1ohu
         mutant
         1. chain a [93029]
         2. chain b [93030]
      2. 1ty4
         complexed with the activator egl-1 peptide (SQ O61667 48-76), chains C and D
         1. chain a [107452]
         2. chain b [107453]
      3. 2a5y
         automatically matched to d1ohua_
         complexed with atp, mg; mutant
         1. region a:71-241 [126183]
8. Early antigen protein R [103426]
   1. Epstein-Barr virus [TaxId: 10376] [103427] (1)
      1. 1q59
         1. chain a [95881]
9. EAT/MCL-1 (Myeloid cell leukemia sequence 1) [118212]
   1. Mouse (Mus musculus) [TaxId: 10090] [118213] (4)
      SQ P97287 152-308
      1. 2jm6
         automatically matched to d1wsxa_
         1. region b:147-308 [138356]
      2. 2rod
         automatically matched to d1wsxa_
         1. region a:147-308 [152177]
      3. 2roc
         automatically matched to d1wsxa_
         mutant
         1. region a:147-308 [152176]
      4. 1wsx
         1. chain a [114867]
10. Bcl-2 homolog V-bcl-2 [144081]
    1. Murid herpesvirus 4 [TaxId: 33708] [144082] (5)
       SQ P89884 6-136
       1. 3bl2
          automatically matched to d2aboa1
          1. region a:6-134 [155376]
       2. 3bl2
          automatically matched to d2aboa1
          1. region b:6-134 [155377]
       3. 3dvu
          automatically matched to d2aboa1
          1. region a:6-134 [157906]
       4. 3dvu
          automatically matched to d2aboa1
          1. region b:6-134 [157907]
       5. 2abo
          1. region a:6-136 [126527]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk