Family: Cytochrome c oxidase subunit I-like

the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3

Lineage:

1. Root: scop
2. Class: Membrane and cell surface proteins and peptides [56835]
   Does not include proteins in the immune system
3. Fold: Cytochrome c oxidase subunit I-like [81443]
   12 transmembrane helices in an approximate threefold rotational symmetric arrangement
4. Superfamily: Cytochrome c oxidase subunit I-like [81442]
   uperfamily
5. Family: Cytochrome c oxidase subunit I-like [81441]
   the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3

Protein Domains:

1. Mitochondrial cytochrome c oxidase, subunit I [81433]
   1. Cow (Bos taurus) [TaxId: 9913] [81432] (21)
      1. 1v54
         complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, unx, zn
         1. chain a [100321]
         2. chain n [100335]
      2. 2dyr
         automatically matched to d1occa_
         complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, unx, zn
         1. region a:1-514 [131899]
      3. 2dyr
         automatically matched to d1occa_
         complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, unx, zn
         1. region n:1-514 [131913]
      4. 1v55
         complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, unx, zn
         1. chain a [100349]
         2. chain n [100363]
      5. 2eij
         automatically matched to d1occa_
         complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
         1. region a:1-514 [132139]
      6. 2eij
         automatically matched to d1occa_
         complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
         1. region n:1-514 [132153]
      7. 2eil
         automatically matched to d1occa_
         complexed with cd, cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
         1. region a:1-514 [132195]
      8. 2eil
         automatically matched to d1occa_
         complexed with cd, cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
         1. region n:1-514 [132209]
      9. 2eik
         automatically matched to d1occa_
         complexed with cd, cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
         1. region a:1-514 [132167]
      10. 2eik
          automatically matched to d1occa_
          complexed with cd, cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
          1. region n:1-514 [132181]
      11. 2dys
          automatically matched to d1occa_
          complexed with cdl, chd, cu, cua, dmu, glh, hea, mg, na, pek, pgv, psc, tgl, unx, zn
          1. region a:1-514 [131927]
      12. 2dys
          automatically matched to d1occa_
          complexed with cdl, chd, cu, cua, dmu, glh, hea, mg, na, pek, pgv, psc, tgl, unx, zn
          1. region n:1-514 [131941]
      13. 2occ
          complexed with cu, hea, mg, na, per, zn
          1. chain a [43518]
          2. chain n [43528]
      14. 1ocr
          complexed with cu, hea, mg, na, zn
          1. chain a [43538]
          2. chain n [43548]
      15. 2eim
          automatically matched to d1occa_
          complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
          1. region a:1-514 [132223]
      16. 2eim
          automatically matched to d1occa_
          complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
          1. region n:1-514 [132237]
      17. 2ein
          automatically matched to d1occa_
          complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
          1. region a:1-514 [132251]
      18. 2ein
          automatically matched to d1occa_
          complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, zn
          1. region n:1-514 [132265]
      19. 1occ
          complexed with cu, hea, mg, zn
          1. chain a [43558]
          2. chain n [43568]
      20. 1ocz
          complexed with azi, cu, hea, mg, na, zn
          1. chain a [43578]
          2. chain n [43588]
      21. 1oco
          complexed with cmo, cu, hea, mg, na, zn
          1. chain a [43598]
          2. chain n [43608]
2. Bacterial aa3 type cytochrome c oxidase subunit I [81436]
   1. Paracoccus denitrificans [TaxId: 266] [81434] (2)
      1. 1ar1
         complexed with ca, cu, hea, lda, mg
         1. chain a [43618]
      2. 1qle
         1. chain a [43620]
   2. Rhodobacter sphaeroides [TaxId: 1063] [81435] (6)
      1. 3dtu
         automatically matched to d1m56a_
         complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd
         1. region a:14-551 [157856]
      2. 3dtu
         automatically matched to d1m56a_
         complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd
         1. region c:17-551 [157859]
      3. 2gsm
         automatically matched to d1m56a_
         complexed with ca, cd, cu, dmu, hea, mg, oh, trd
         1. region a:17-551 [135589]
      4. 2gsm
         automatically matched to d1m56a_
         complexed with ca, cd, cu, dmu, hea, mg, oh, trd
         1. region c:17-550 [135592]
      5. 1m56
         complexed with ca, cu, hea, mg, peh
         1. chain a [74471]
         2. chain g [74476]
      6. 1m57
         complexed with ca, cu, hea, mg, peh; mutant
         1. chain a [74481]
         2. chain g [74486]
3. Bacterial ba3 type cytochrome c oxidase subunit I [81438]
   1. Thermus thermophilus [TaxId: 274] [81437] (2)
      1. 1xme
         automatically matched to d1ehka_
         complexed with bng, cu, cua, gol, has, hem
         1. region a:14-562 [122143]
      2. 1ehk
         complexed with 1cu, bng, cua, has, hem
         1. chain a [43624]
4. Cytochrome O ubiquinol oxidase, subunit I [81440]
   1. Escherichia coli [TaxId: 562] [81439] (1)
      1. 1fft
         complexed with cu, hem, heo
         1. chain a [43627]
         2. chain f [43630]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk