Fold: Trefoil/Plexin domain-like

disulfide-rich fold; common core is alpha+beta with two conserved disulfides

Lineage:

1. Root: scop
2. Class: Small proteins [56992]
   Usually dominated by metal ligand, heme, and/or disulfide bridges
3. Fold: Trefoil/Plexin domain-like [57491]
   disulfide-rich fold; common core is alpha+beta with two conserved disulfides

Superfamilies:

1. Trefoil [57492] (1)
   uperfamily
   1. Trefoil [57493] (3)
      1. Pancreatic spasmolytic polypeptide [57494]
         duplication: consists of two homologous domains
         1. Pig (Sus scrofa) [TaxId: 9823] [57495] (4)
      2. PNR-2/PS2, TFF1 [57496]
         single trefoil motif protein
         1. Human (Homo sapiens) [TaxId: 9606] [57497] (2)
      3. Intestinal trefoil factor [57498]
         1. Human (Homo sapiens) [TaxId: 9606] [57499] (2)
2. Plexin repeat [103575] (1)
   uperfamily
   1. Plexin repeat [103576] (3)
      Pfam 01437
      1. Semaphorin 4d [103577]
         1. Human (Homo sapiens) [TaxId: 9606] [103578] (1)
      2. Hepatocyte growth factor receptor [111407]
         1. Human (Homo sapiens) [TaxId: 9606] [111408] (2)
            SQ P08581 40-564
      3. Integrin beta-3 [118249]
         1. Human (Homo sapiens) [TaxId: 9606] [118250] (2)
            SQ P05106 27-716 ! SQ P05106 27-466
3. Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain [118251] (1)
   alpha-beta(2)-alpha; fragment of a larger dimeric protein
   uperfamily
   1. Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain [118252] (1)
      1. Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain [118253]
         1. Trypanosoma brucei brucei [TaxId: 5702] [118254] (1)
            SQ P26332 385-459 # structure of the N-terminal domain (27-390) is also known (scop_sp 58090)

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk