Structural Classification of Proteins
home mail help root up expand collapse

Fold: Knottins (small inhibitors, toxins, lectins)

disulfide-bound fold; contains beta-hairpin with two adjacent disulfides

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Knottins (small inhibitors, toxins, lectins) [57015]
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides

Superfamilies:

  1. Plant lectins/antimicrobial peptides [57016] (2)
    link to SUPERFAMILY database - Superfamily
    1. Hevein-like agglutinin (lectin) domain [57017] (6)
      1. Wheat germ agglutinin (WGA) [57018]
        one subunit consists of four homologous domains
        1. Wheat (Triticum aestivum), also known as Triticum vulgare [TaxId: 4565] [57019] (9) picpic
      2. Isolectin VI [57020]
        consists of two homologous domains
        1. Stinging nettle (Urtica dioica), UDA [TaxId: 3501] [57021] (6) picpic
      3. Hevein [57022]
        single domain
        1. Hevea brasiliensis [TaxId: 3981] [57023] (3) picpic
          SQ P02877 18-49
      4. Lectin-C [103522]
        consists of three homologous domains
        1. American pokeweed (Phytolacca americana) [TaxId: 3527] [103523] (1) picpic
      5. Lectin-D [103524]
        consists of two homologous domains
        1. American pokeweed (Phytolacca americana) [TaxId: 3527] [103525] (3) picpic
      6. Antifungal peptide 2 [111392]
        1. Hardy rubber tree (Eucommia ulmoides) [TaxId: 4392] [111393] (2) picpic
          SQ P83597
    2. Antimicrobial peptide 2, AC-AMP2 [57024] (1)
      1. Antimicrobial peptide 2, AC-AMP2 [57025]
        1. Tassel (Amaranthus caudatus) [TaxId: 3567] [57026] (1) picpic
  2. Plant inhibitors of proteinases and amylases [57027] (1)
    link to SUPERFAMILY database - Superfamily
    1. Plant inhibitors of proteinases and amylases [57028] (7)
      1. Trypsin inhibitor [57029]
        1. Bitter gourd (Momordica charantia), linn. Cucurbitaceae, seed [TaxId: 3673] [57030] (2) picpic
        2. Squash (Cucurbita maxima) [TaxId: 3661] [57031] (7) picpic
        3. Spiny bitter cucumber (Momordica cochinchinensis), MCOTI-II [TaxId: 3674] [64535] (4) picpic
        4. Vegetable marrow (Cucurbita pepo) [TaxId: 3663] [57032] (2) picpic
        5. Jumping cucumber (Ecballium elaterium) [TaxId: 3679] [57033] (16) picpic
          SQ P12071
      2. Carboxypeptidase A inhibitor [57034]
        1. Potato [TaxId: 4113] [57035] (3) picpic
      3. alpha-amylase inhibitor (AAI) [57036]
        1. Prince's feather (Amaranthus hypochondriacus) [TaxId: 28502] [57037] (3) picpic
  3. Cyclotides [57038] (4)
    macrocyclic plant knottins closed with the formation of an Asn-Gly peptide
    link to SUPERFAMILY database - Superfamily
    1. Kalata B1 [57039] (1)
      1. Kalata B1 [57040]
        cyclic 29-residue polypeptide
        1. African plant (Oldenlandia affinis) [TaxId: 60225] [57041] (8) picpic
          SQ P58454 71-97
    2. Cycloviolacin [57042] (2)
      1. Cycloviolacin O1 [57043]
        cyclic 30-residue polypeptide
        1. Plant (Viola odorata) [TaxId: 97441] [57044] (2) picpic
      2. Root cyclotide 1 [118231]
        1. Australian violet (Viola hederacea) [TaxId: 180952] [118232] (1) picpic
          SQ P83937
    3. Circulin A [57045] (1)
      1. Circulin A [57046]
        cyclic 30-residue polypeptide
        1. Chassalia parviflora [TaxId: 58431] [57047] (1) picpic
    4. Palicourein [103526] (1)
      1. Palicourein [103527]
        1. Palicourea condensata [TaxId: 272141] [103528] (1) picpic
  4. Gurmarin-like [57048] (2)
    link to SUPERFAMILY database - Superfamily
    1. Gurmarin, a sweet taste-suppressing polypeptide [57049] (1)
      1. Gurmarin, a sweet taste-suppressing polypeptide [57050]
        1. Gymnema sylvestre [TaxId: 4068] [57051] (2) picpic
    2. Antifungal peptide [57052] (2)
      1. Antifungal peptide PAFP-S [57053]
        1. Pokeweed (Phytolacca americana) [TaxId: 3527] [57054] (1) picpic
      2. Antifungal peptide Alo3 [103529]
        1. Insect (Acrocinus longimanus) [TaxId: 227548] [103530] (1) picpic
  5. Agouti-related protein [57055] (1)
    link to SUPERFAMILY database - Superfamily
    1. Agouti-related protein [57056] (1)
      1. Agouti-related protein [57057]
        1. Synthetic, based on Homo sapiens sequence [57058] (2) picpic
  6. omega toxin-like [57059] (5)
    link to SUPERFAMILY database - Superfamily
    1. Conotoxin [57060] (13)
      1. Conotoxin [57061]
        1. Sea snail (Conus geographus), G IVa [TaxId: 6491] [57062] (4) picpic
          SQ P01522 46-72
        2. Synthetic, based on Conus geographus, GS [57063] (1) picpic
        3. Sea snail (Conus magus), M VIIc [TaxId: 6492] [57064] (2) picpic
        4. Sea snail (Conus magus), M VIIa [TaxId: 6492] [57065] (7) picpic
          SQ P05484 46-70
        5. Conus striatus, S VIb [TaxId: 6493] [57066] (1) picpic
        6. Conus striatus, SO3 [TaxId: 6493] [57067] (1) picpic
        7. Conus purpurascens, kappa-pVIIa [TaxId: 41690] [57068] (2) picpic
        8. Conus tulipa, T VIIa [TaxId: 6495] [57069] (1) picpic
        9. Conus ermineus, E VIa [TaxId: 55423] [57070] (2) picpic
        10. Conus textile, Tx VII [TaxId: 6494] [57071] (1) picpic
        11. Conus textile, Tx VIa [TaxId: 6494] [82877] (1) picpic
        12. Conus gloriamaris, Tx IXa [TaxId: 37336] [82878] (1) picpic
          Spasmodic conotoxin
        13. Marble cone (Conus marmoreus), mrVIb [TaxId: 42752] [111394] (1) picpic
          SQ Q26443
    2. Spider toxins [57072] (25)
      1. omega-Agatoxin IV, IVa, IVb [57073]
        1. Funnel web spider (Agelenopsis aperta) [TaxId: 6908] [57074] (6) picpic
      2. mu-Agatoxin-I [57075]
        1. Funnel web spider (Agelenopsis aperta) [TaxId: 6908] [57076] (1) picpic
      3. ACTX-HI:OB4219 [69926]
        1. Funnel-web spider (Hadronyche infensa) [TaxId: 153481] [69927] (2) picpic
      4. Atracotoxin-hvI (versutoxin) [57077]
        1. Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904] [57078] (3) picpic
      5. J-atracotoxin-hv1c [57079]
        1. Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904] [57080] (1) picpic
      6. Atracotoxin-hv2a [69928]
        1. Funnel-web spider (Hadronyche versuta) [TaxId: 6904] [69929] (2) picpic
      7. Robustoxin [57081]
        1. Funnel-web spider (Atrax robustus) [TaxId: 6903] [57082] (1) picpic
      8. Huwentoxin-I [57083]
        1. Chinese bird spider (Selenocosmia huwena) [TaxId: 29017] [57084] (1) picpic
      9. Hainantoxin-I [82879]
        1. Spider (Selenocosmia hainana) [TaxId: 209901] [82880] (1) picpic
      10. Huwentoxin-II [57085]
        1. Chinese bird spider (Selenocosmia huwena) [TaxId: 29017] [57086] (1) picpic
      11. Huwentoxin-IV [75658]
        1. Chinese bird spider (Selenocosmia huwena) [TaxId: 29017] [75659] (1) picpic
      12. Hainantoxin-IV [82881]
        1. Spider (Selenocosmia hainana) [TaxId: 209901] [82882] (3) picpic
      13. Lectin SHL-I [57087]
        1. Chinese bird spider (Selenocosmia huwena) [TaxId: 29017] [57088] (1) picpic
      14. SGtx1 [103531]
        1. Spider (Scodra griseipes) [TaxId: 118974] [103532] (1) picpic
      15. Hanatoxin 1 [57089]
        1. Tarantula (Grammostola spatulata) [TaxId: 432528] [57090] (1) picpic
      16. Grammotoxin SIA, GrTx [75660]
        1. Tarantula (Grammostola spatulata) [TaxId: 432528] [75661] (1) picpic
      17. Heteropdatoxin 2, hptx2 [57091]
        1. Giant crab spider (Heteropoda venatoria) [TaxId: 152925] [57092] (1) picpic
      18. GSmtx2 [75662]
        1. Chilean rose tarantula (Grammostola spatulata) [TaxId: 432528] [75663] (1) picpic
      19. GSmtx4 [75664]
        1. Chilean rose tarantula (Grammostola spatulata) [TaxId: 432528] [75665] (2) picpic
          SQ Q7YT39 47-80
      20. Psalmotoxin 1 [103533]
        1. Spider (Psalmopoeus cambridgei) [TaxId: 179874] [103534] (1) picpic
      21. Maurocalcin [57093]
        scorpion toxin with a spider toxin-like fold
        1. Scorpio maurus [TaxId: 53956] [57094] (1) picpic
      22. Imperatoxin A [90132]
        scorpion toxin with a spider toxin-like fold
        1. Emperor scorpion (Pandinus imperator) [TaxId: 55084] [90133] (1) picpic
      23. Tachystatin [75666]
        1. Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853] [75667] (1) picpic
      24. Phrixotoxin 1 (PaTX1) [118233]
        1. Chilean copper tarantula (Phrixotrichus auratus) [TaxId: 269635] [118234] (1) picpic
          SQ P61230
      25. Huwentoxin-X [118235]
        1. Spider (Selenocosmia hainana) [TaxId: 209901] [118236] (1) picpic
          SQ P68424
    3. Insect toxins [69930] (2)
      1. PTU-1 [69931]
        1. Assassin bug (Peirates turpis) [TaxId: 181095] [69932] (1) picpic
      2. ADO1 [103535]
        1. Assassin bug (Agriosphodrus dohrni) [TaxId: 184613] [103536] (1) picpic
    4. Albumin 1 [90134] (2)
      1. Leginsulin [90135]
        a plant hormone
        1. Soybean (Glycine max) [TaxId: 3847] [90136] (1) picpic
      2. Pab1, subunit b [103537]
        insecticidal protein
        1. Garden pea (Pisum sativum) [TaxId: 3888] [103538] (1) picpic
    5. Vhv1.1, polydnaviral gene product [118237] (1)
      1. Vhv1.1, polydnaviral gene product [118238]
        1. Campoletis sonorensis virus, CsIV [TaxId: 10484] [118239] (2) picpic
          SQ Q89632 162-208
  7. Scorpion toxin-like [57095] (5)
    link to SUPERFAMILY database - Superfamily
    1. Long-chain scorpion toxins [57096] (22)
      1. Scorpion toxin [57097]
        1. Centruroides sculpturatus, variant 2 [TaxId: 218467] [69933] (2) picpic
        2. Centruroides sculpturatus, variant 3 [TaxId: 218467] [57098] (1) picpic
        3. Centruroides sculpturatus, beta [TaxId: 218467] [57099] (2) picpic
        4. Centruroides sculpturatus, variant 1 [TaxId: 218467] [57100] (2) picpic
        5. Centruroides sculpturatus, variant V [TaxId: 218467] [57101] (2) picpic
        6. Scorpion (Androctonus australis hector), Toxin II [TaxId: 70175] [57102] (3) picpic
          SQ P01484
        7. Mexican scorpion (Centruroides noxius), toxin II [TaxId: 6878] [57103] (1) picpic
        8. Scorpion (Buthotus judaicus), BJXTR-IT [TaxId: 6863] [57104] (1) picpic
        9. Scorpion (Buthus martensii), toxin m8 [TaxId: 34649] [57105] (1) picpic
        10. Chinese scorpion (Buthus martensii), toxin m1 [TaxId: 34649] [57106] (5) picpic
          SQ P45697
        11. Chinese scorpion (Buthus martensii), toxin m2 [TaxId: 34649] [57107] (1) picpic
        12. Chinese scorpion (Buthus martensii), toxin m4 [TaxId: 34649] [57108] (1) picpic
        13. Indian red scorpion (Buthus tamulus), neurotoxin [TaxId: 34647] [57109] (3) picpic
        14. Brazilian scorpion (Tityus serrulatus) [TaxId: 6887] [57110] (2) picpic
        15. Bark scorpion (Centruroides sculpturatus), cse-v5 [TaxId: 218467] [64536] (3) picpic
        16. Mexican scorpion (Centruroides noxius) [TaxId: 6878] [111395] (1) picpic
          SQ P63019
        17. Scorpion (Buthus martensii), BmK IT-AP [TaxId: 34649] [118240] (1) picpic
          SQ O77091 19-90
      2. alpha toxin [57111]
        Anti-mammal and anti-insect scorpion toxin
        1. Leiurus quinquestriatus quinquestriatus, LQQIII [TaxId: 6885] [57112] (1) picpic
        2. Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884] [57113] (3) picpic
        3. Chinese scorpion (Buthus martensii karsch) [TaxId: 34649] [103539] (2) picpic
      3. Tx10 alpha-like toxin [103540]
        1. Chinese scorpion (Buthus martensii) [TaxId: 34649] [103541] (1) picpic
      4. LQH III alpha-like toxin, LQH [57114]
        1. Hebraei scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884] [57115] (2) picpic
    2. Short-chain scorpion toxins [57116] (38)
      1. Bmtx1 [57117]
        1. Buthus martensii [TaxId: 34649] [57118] (1) picpic
      2. Bmktx [57119]
        1. Buthus martensii [TaxId: 34649] [57120] (1) picpic
      3. Bmtx2 [57121]
        1. Buthus martensii [TaxId: 34649] [57122] (1) picpic
      4. Bmtx3 [103542]
        1. Buthus martensii karsch [TaxId: 34649] [103543] (1) picpic
      5. Bmp02 neurotoxin [57123]
        1. Chinese scorpion (Buthus martensii) [TaxId: 34649] [57124] (1) picpic
      6. Bekm-1 [82883]
        1. Lesser asian scorpion (Buthus eupeus) [TaxId: 34648] [82884] (2) picpic
      7. alpha-KTX, K+-channel blocker [64537]
        1. Brazilian scorpion (Tityus serrulatus), Tstx-k alpha [TaxId: 6887] [64538] (1) picpic
        2. Scorpion (Tityus cambridgei) [TaxId: 184226] [69934] (1) picpic
      8. Neurotoxin bmk37 [103544]
        1. Chinese scorpion (Buthus martensi karsch) [TaxId: 34649] [103545] (2) picpic
      9. Bmkx [103546]
        1. Chinese scorpion (Buthus martensi karsch) [TaxId: 34649] [103547] (2) picpic
      10. Hongotoxin 1 [103548]
        1. Scorpion (Centruroides margaritatus) [TaxId: 29018] [103549] (1) picpic
      11. Margatoxin [57125]
        1. Scorpion (Centruroides margaritatus) [TaxId: 29018] [57126] (1) picpic
      12. Noxiustoxin [57127]
        1. Mexican scorpion (Centruroides noxius) [TaxId: 6878] [57128] (1) picpic
      13. Maurotoxin [57129]
        1. Scorpion (Scorpio maurus) [TaxId: 53956] [57130] (3) picpic
          SQ P80719
        2. Scorpio maurus palmatus [TaxId: 53957] [161118] (1) picpic
      14. Charybdotoxin [57131]
        1. Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884] [57132] (4) picpic
      15. Scyllatoxin [57133]
        1. Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884] [57134] (1) picpic
      16. Agitoxin [57135]
        1. Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884] [57136] (1) picpic
      17. Chlorootoxin [57137]
        1. Scorpion (Leiurus quinquestriatus), venom [TaxId: 6883] [57138] (1) picpic
      18. Butantoxin [57139]
        1. Brazilian scorpion (Tityus serrulatus) [TaxId: 6887] [57140] (2) picpic
      19. Toxin ts kappa [57141]
        1. Scorpion (Tityus serrulatus) [TaxId: 6887] [57142] (1) picpic
      20. Toxin I5a [57143]
        1. Scorpion (Buthus eupeus) [TaxId: 34648] [57144] (1) picpic
      21. Toxin analog [57145]
        1. Scorpion (Androctonus mauretanicus mauretanicus) [TaxId: 6860] [57146] (1) picpic
      22. Toxin analog P01 [57147]
        1. Scorpion (Androctonus mauretanicus mauretanicus) [TaxId: 6860] [57148] (1) picpic
      23. OSK1 TOXIN [57149]
        1. Central asian scorpion (Orthochirus scrobiculosus) [TaxId: 6892] [57150] (1) picpic
      24. Kaliotoxin (KTX) [57151]
        1. Scorpion (Androctonus mauretanicus mauretanicus) [TaxId: 6860] [57152] (3) picpic
        2. Androctonus mauretanicus [TaxId: 6859] [161119] (1) picpic
      25. LQ2 toxin [57153]
        1. Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884] [57154] (1) picpic
      26. Pandinus toxin [57155]
        1. Emperor scorpion (Pandinus imperator), PITX-Ka [TaxId: 55084] [57156] (1) picpic
        2. Emperor scorpion (Pandinus imperator), PITX-Kb [TaxId: 55084] [57157] (1) picpic
      27. PI4, potassium channel blocking toxin 4 [103550]
        1. Scorpion (Pandinus imperator) [TaxId: 55084] [103551] (1) picpic
      28. Cobatoxin 1 [103552]
        1. Scorpion (Centruroides noxius) [TaxId: 6878] [103553] (1) picpic
      29. PI7 [57158]
        nontoxic peptide?
        1. Scorpion (Pandinus imperator) [TaxId: 55084] [57159] (1) picpic
      30. Ergtoxin (HERG specific toxin CnErg1) [90137]
        1. Scorpion (Centruroides noxius) [TaxId: 6878] [90138] (2) picpic
          SQ Q86QT3 21-62
      31. K+ toxin-like peptide Bmp07 (BmKK2) [111396]
        1. Chinese scorpion (Buthus martensi karsch) [TaxId: 34649] [111397] (1) picpic
          SQ Q95NK7
      32. Neurotoxin bmp01 [111398]
        1. Chinese scorpion (Buthus martensii karsch) [TaxId: 34649] [111399] (1) picpic
          SQ Q9U8D2
      33. Neurotoxin bmp03 [111400]
        1. Chinese scorpion (Buthus martensii karsch) [TaxId: 34649] [111401] (1) picpic
          SQ Q9U8D1
      34. Istx [118241]
        1. Scorpion (Opisthacanthus madagascariensis) [TaxId: 167108] [118242] (1) picpic
          SQ Q10726 2-33 # 53% sequence identity
    3. Defensin MGD-1 [57160] (1)
      1. Defensin MGD-1 [57161]
        1. Mediterranean mussel (Mytilus galloprovincialis) [TaxId: 29158] [57162] (1) picpic
    4. Insect defensins [57163] (6)
      1. Heliomicin [69935]
        1. Tobacco budworm (Heliothis virescens) [TaxId: 7102] [69936] (2) picpic
      2. Defensin ARD1 [103554]
        1. Archaeoprepona demophon [TaxId: 191427] [103555] (3) picpic
      3. Drosomycin [57164]
        inducible antifungal protein
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [57165] (1) picpic
      4. Defensin A [57166]
        1. Flesh fly (Phormia terranovae) [TaxId: 34676] [57167] (1) picpic
        2. Flesh fly (Sarcophaga peregrina), sapesin [TaxId: 7386] [74659] (1) picpic
      5. Antimicrobial peptide termicin [90139]
        1. Termite (Pseudacanthotermes spiniger) [TaxId: 115113] [90140] (1) picpic
    5. Plant defensins [57170] (10)
      1. gamma-Thionin [57171]
        1. Barley (Hordeum vulgare) [TaxId: 4513] [57172] (1) picpic
        2. English wheat (Triticum turgidum) [TaxId: 4571] [57173] (1) picpic
      2. Floral defensin 1 [103556]
        flower-specific gamma-thionin
        1. Common tobacco (Nicotiana tabacum), NAD1 [TaxId: 4097] [103557] (1) picpic
        2. Garden petunia (Petunia x hybrida), PHD1 [TaxId: 4102] [103558] (1) picpic
      3. Antifungal protein 1 (RS-AFP1) [57174]
        1. Radish (Raphanus sativus) [TaxId: 3726] [57175] (1) picpic
      4. Antimicrobial protein 1 (AH-AMP1) [57176]
        1. Horse chestnut (Aesculus hippocastanum) [TaxId: 43364] [57177] (1) picpic
      5. Defensin 1 (PSD1) [69937]
        1. Pea (Pisum sativum) [TaxId: 3888] [69938] (1) picpic
      6. Brazzein [57178]
        sweet protein
        1. J'oublie (Pentadiplandra brazzeana) [TaxId: 43545] [57179] (2) picpic
      7. Trypsin/chymotrypsin inhibitor ATT [82885]
        1. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [82886] (1) picpic
      8. S-locus pollen protein [103559]
        1. Brassica rapa [TaxId: 3711] [103560] (1) picpic
  8. Cellulose-binding domain [57180] (1)
    link to SUPERFAMILY database - Superfamily
    1. Cellulose-binding domain [57181] (1)
      1. Cellobiohydrolase I [57182]
        1. Trichoderma reesei, ct-cbh I [TaxId: 51453] [57183] (6) picpic
  9. Growth factor receptor domain [57184] (1)
    link to SUPERFAMILY database - Superfamily
    1. Growth factor receptor domain [57185] (9)
      1. Insulin-like growth factor-binding protein-5 (IGFBP-5) [57186]
        1. Human (Homo sapiens) [TaxId: 9606] [57187] (2) picpic
      2. Type 1 insulin-like growth factor receptor Cys-rich domain [57188]
        contains 3 cystine-knot subdomains and 4 single-disulfide cystine knot-like subdomains
        1. Human (Homo sapiens) [TaxId: 9606] [57189] (1) picpic
      3. Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains [75668]
        1. Human (Homo sapiens) [TaxId: 9606] [75669] (1) picpic
      4. EGF receptor Cys-rich domains [82887]
        1. Human (Homo sapiens) [TaxId: 9606] [82888] (15) picpic
      5. Protooncoprotein Her2 extracellular domain [82889]
        1. Human (Homo sapiens) [TaxId: 9606] [82890] (2) picpic
        2. Rat (Rattus norvegicus) [TaxId: 10116] [82891] (1) picpic
      6. Insulin-like growth factor-binding protein 4 [161120]
        1. Human (Homo sapiens) [TaxId: 9606] [161121] (2) picpic
          SQ P22692 24-103
      7. Insulin receptor [161122]
        1. Human (Homo sapiens) [TaxId: 9606] [161123] (1) picpic
          SQ P06213 184-338
      8. Insulin-like growth factor-binding protein 4, IGFBP4 [161124]
        1. Human (Homo sapiens) [TaxId: 9606] [161125] (3) picpic
          SQ P22692 22-113
  10. Colipase-like [57190] (1)
    link to SUPERFAMILY database - Superfamily
    1. Colipase-like [57191] (2)
      1. (Pro)colipase [57192]
        duplication: consists of two (sub)domains of this common fold
        1. Pig (Sus scrofa) [TaxId: 9823] [57193] (6) picpic
      2. Intestinal toxin 1 [57194]
        1. Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620] [57195] (1) picpic
  11. EGF/Laminin [57196] (7)
    link to SUPERFAMILY database - Superfamily
    1. EGF-type module [57197] (27)
      1. Factor IX (IXa) [57198]
        1. Human (Homo sapiens) [TaxId: 9606] [57199] (7) picpic
        2. Pig (Sus scrofa) [TaxId: 9823] [57200] (31) picpic
      2. Coagulation factor VIIa [57201]
        1. Human (Homo sapiens) [TaxId: 9606] [57202] (19) picpic
          SQ P08709 108-202 ! SQ P08709 107-202
      3. E-selectin, EGF-domain [57203]
        1. Human (Homo sapiens) [TaxId: 9606] [57204] (5) picpic
      4. Factor X, N-terminal module [57205]
        1. Human (Homo sapiens) [TaxId: 9606] [57206] (75) picpic
          SQ P00742 127-178
        2. Cow (Bos taurus) [TaxId: 9913] [57207] (5) picpic
      5. Activated protein c (autoprothrombin IIa) [57208]
        1. Human (Homo sapiens) [TaxId: 9606] [57209] (1) picpic
      6. Prostaglandin H2 synthase-1, EGF-like module [57210]
        the rest of protein is heme-linked peroxidase, all-alpha fold
        1. Sheep (Ovis aries) [TaxId: 9940] [57211] (22) picpic
          SQ P05979 32-584
        2. Mouse (Mus musculus) [TaxId: 10090] [57212] (8) picpic
      7. P-selectin, EGF-domain [57213]
        1. Human (Homo sapiens) [TaxId: 9606] [57214] (1) picpic
      8. Epidermal growth factor, EGF [57215]
        1. Mouse (Mus musculus) [TaxId: 10090] [57216] (8) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [69939] (4) picpic
      9. Transforming growth factor alpha [57217]
        1. Human (Homo sapiens) [TaxId: 9606] [57218] (6) picpic
      10. Epiregulin, EGF-domain [103561]
        1. Human (Homo sapiens) [TaxId: 9606] [103562] (2) picpic
      11. Betacellulin-2 [75670]
        1. Human (Homo sapiens) [TaxId: 9606] [75671] (2) picpic
      12. Heparin-binding epidermal growth factor, HBEGF [57219]
        extracellular domain
        1. Human (Homo sapiens) [TaxId: 9606] [57220] (1) picpic
      13. Plasminogen activator (urokinase-type) [57221]
        1. Human (Homo sapiens) [TaxId: 9606] [57222] (12) picpic
      14. Heregulin-alpha, EGF-like domain [57223]
        1. Human (Homo sapiens) [TaxId: 9606] [57224] (4) picpic
      15. Thrombomodulin, different EGF-like domains [57225]
        1. Human (Homo sapiens) [TaxId: 9606] [57226] (6) picpic
      16. Fibrillin-1 [57227]
        duplication: contains 47 EFG-like domains
        1. Human (Homo sapiens) [TaxId: 9606] [57228] (8) picpic
      17. Mannose-binding protein associated serine protease 2, MASP2 [90141]
        EGF-like domain separates two CUB domains
        1. Rat (Rattus norvegicus) [TaxId: 10116] [90142] (1) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [111402] (1) picpic
          SQ O00187 17-181
      18. Complement C1S component [90143]
        1. Human (Homo sapiens) [TaxId: 9606] [90144] (1) picpic
      19. Complement protease C1R [57229]
        1. Human (Homo sapiens) [TaxId: 9606] [57230] (1) picpic
      20. Plasminogen activator (tissue-type), t-PA [57231]
        1. Human (Homo sapiens) [TaxId: 9606] [57232] (1) picpic
      21. Low density lipoprotein (LDL) receptor, different EGF domains [64539]
        1. Human (Homo sapiens) [TaxId: 9606] [64540] (7) picpic
          SQ P01130 272-353
      22. Neurogenic locus notch homolog protein 1, Notch1 [118243]
        1. Human (Homo sapiens) [TaxId: 9606] [118244] (4) picpic
          SQ P46531 411-526
    2. Integrin beta EGF-like domains [69940] (1)
      1. Integrin beta EGF-like domains [69941]
        1. Human (Homo sapiens) [TaxId: 9606] [69942] (5) picpic
          SQ P05106 27-716
    3. EGF-like domain of nidogen-1 [64541] (1)
      1. EGF-like domain of nidogen-1 [64542]
        1. Mouse (Mus musculus) [TaxId: 10090] [64543] (2) picpic
    4. Laminin-type module [57233] (1)
      1. Laminin gamma1 chain [57234]
        1. Mouse (Mus musculus) [TaxId: 10090] [57235] (3) picpic
    5. Follistatin (FS) module N-terminal domain, FS-N [57236] (2)
      1. Domain of BM-40/SPARC/osteonectin [57237]
        the N-terminal part of FS module
        1. Human (Homo sapiens) [TaxId: 9606] [57238] (2) picpic
      2. Domain of follistatin [90145]
        the N-terminal part of the heparin-binding module, FS1
        1. Rat (Rattus norvegicus) [TaxId: 10116] [90146] (3) picpic
    6. Merozoite surface protein 1 (MSP-1) [57239] (3)
      1. Merozoite surface protein 1 (MSP-1) [57240]
        1. Malaria parasite (Plasmodium cynomolgi) [TaxId: 5827] [57241] (1) picpic
        2. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [57242] (3) picpic
        3. Malaria parasite (Plasmodium knowlesi) [TaxId: 5850] [82892] (1) picpic
    7. Cripto EGF-like domain-like [144100] (1)
      1. Cripto growth factor [144101]
        Teratocarcinoma-derived growth factor
        1. Mouse (Mus musculus) [TaxId: 10090] [144102] (1) picpic
          SQ P51865 96-134
  12. Bromelain inhibitor VI (cysteine protease inhibitor) [57243] (1)
    link to SUPERFAMILY database - Superfamily
    1. Bromelain inhibitor VI (cysteine protease inhibitor) [57244] (1)
      1. Bromelain inhibitor VI (cysteine protease inhibitor) [57245]
        duplication: consists of two subdomains of this fold
        1. Pineapple (Ananas comosus) [TaxId: 4615] [57246] (2) picpic
  13. Bowman-Birk inhibitor, BBI [57247] (1)
    link to SUPERFAMILY database - Superfamily
    1. Bowman-Birk inhibitor, BBI [57248] (10)
      1. Bowman-Birk inhibitor, BBI [57249]
        duplication: consists of two sequence repeats each having this fold
        1. Soybean (Glycine max), PI-II [TaxId: 3847] [57250] (1) picpic
        2. Soybean (Glycine max) [TaxId: 3847] [57251] (4) picpic
        3. Winter pea (Pisum sativum) [TaxId: 3888] [57252] (1) picpic
        4. Mung bean (Vigna radiata) [TaxId: 157791] [57253] (1) picpic
        5. Barley (Hordeum vulgare) [TaxId: 4513] [57254] (4) picpic
          further duplication: consist of two BBI domains
        6. Adzuki bean (Phaseolus angularis) [TaxId: 3914] [57255] (1) picpic
        7. Lima bean (Phaseolus lunatus) [TaxId: 3884] [82893] (1) picpic
        8. Snail medic (Medicago scutellata) [TaxId: 36901] [90147] (2) picpic
        9. Cowpea (Vigna unguiculata) [TaxId: 3917] [161126] (3) picpic
          SQ P17734 17-72! SQ Q84X88 44-100
        10. Vigna radiata var. radiata [TaxId: 3916] [161127] (1) picpic
  14. Elafin-like [57256] (1)
    link to SUPERFAMILY database - Superfamily
    1. Elafin-like [57257] (2)
      1. Elafin, elastase-specific inhibitor [57258]
        1. Human (Homo sapiens) [TaxId: 9606] [57259] (2) picpic
      2. Nawaprin [103563]
        1. Spitting cobra (Naja nigricollis) [TaxId: 8654] [103564] (1) picpic
  15. Leech antihemostatic proteins [57262] (2)
    link to SUPERFAMILY database - Superfamily
    1. Huristasin-like [57263] (3)
      1. Hirustasin [57264]
        1. Medicinal leech (Hirudo medicinalis) [TaxId: 6421] [57265] (3) picpic
      2. Bdellastasin [57266]
        1. Medicinal leech (Hirudo medicinalis) [TaxId: 6421] [57267] (3) picpic
      3. Factor Xa inhibitor antistasin [57268]
        duplication: consists of two similar domain
        1. Mexican leech (Haementeria officinalis) [TaxId: 6410] [57269] (1) picpic
    2. Hirudin-like [57270] (3)
      1. Hirudin [57271]
        1. Leech (Hirudo medicinalis) [TaxId: 6421] [57272] (8) picpic
      2. Decorsin [57273]
        1. North american leech (Macrobdella decora) [TaxId: 6405] [57274] (1) picpic
      3. Haemadin [57275]
        1. Indian leech (Haemadipsa sylvestris) [TaxId: 13555] [57276] (1) picpic
  16. Granulin repeat [57277] (1)
    link to SUPERFAMILY database - Superfamily
    1. Granulin repeat [57278] (3)
      1. N-terminal domain of granulin-1 [57279]
        1. Carp (Cyprinus carpio) [TaxId: 7962] [57280] (3) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [57281] (1) picpic
      2. Oryzain beta chain [64544]
        1. Rice (Oryza sativa) [TaxId: 4530] [64545] (1) picpic
  17. Satiety factor CART (cocaine and amphetamine regulated transcript) [64546] (1)
    link to SUPERFAMILY database - Superfamily
    1. Satiety factor CART (cocaine and amphetamine regulated transcript) [64547] (1)
      1. Satiety factor CART (cocaine and amphetamine regulated transcript) [64548]
        1. Human (Homo sapiens) [TaxId: 9606] [64549] (1) picpic
  18. DPY module [90148] (1)
    link to SUPERFAMILY database - Superfamily
    1. DPY module [90149] (1)
      1. Dumpy [90150]
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [90151] (1) picpic
  19. Bubble protein [103565] (1)
    link to SUPERFAMILY database - Superfamily
    1. Bubble protein [103566] (1)
      1. Bubble protein [103567]
        1. Penicillium brevicompactum [TaxId: 5074] [103568] (1) picpic

Enter search key:

MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk