Structural Classification of Proteins
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Superfamily: Plant lectins/antimicrobial peptides

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Knottins (small inhibitors, toxins, lectins) [57015]
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. Superfamily: Plant lectins/antimicrobial peptides [57016]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Hevein-like agglutinin (lectin) domain [57017] (6)
    1. Wheat germ agglutinin (WGA) [57018]
      one subunit consists of four homologous domains
      1. Wheat (Triticum aestivum), also known as Triticum vulgare [TaxId: 4565] [57019] (9) picpic
    2. Isolectin VI [57020]
      consists of two homologous domains
      1. Stinging nettle (Urtica dioica), UDA [TaxId: 3501] [57021] (6) picpic
    3. Hevein [57022]
      single domain
      1. Hevea brasiliensis [TaxId: 3981] [57023] (3) picpic
        SQ P02877 18-49
    4. Lectin-C [103522]
      consists of three homologous domains
      1. American pokeweed (Phytolacca americana) [TaxId: 3527] [103523] (1) picpic
    5. Lectin-D [103524]
      consists of two homologous domains
      1. American pokeweed (Phytolacca americana) [TaxId: 3527] [103525] (3) picpic
    6. Antifungal peptide 2 [111392]
      1. Hardy rubber tree (Eucommia ulmoides) [TaxId: 4392] [111393] (2) picpic
        SQ P83597
  2. Antimicrobial peptide 2, AC-AMP2 [57024] (1)
    1. Antimicrobial peptide 2, AC-AMP2 [57025]
      1. Tassel (Amaranthus caudatus) [TaxId: 3567] [57026] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk