Structural Classification of Proteins
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Superfamily: EGF/Laminin

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Knottins (small inhibitors, toxins, lectins) [57015]
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. Superfamily: EGF/Laminin [57196]
    link to SUPERFAMILY database - Superfamily

Families:

  1. EGF-type module [57197] (27)
    1. Factor IX (IXa) [57198]
      1. Human (Homo sapiens) [TaxId: 9606] [57199] (7) picpic
      2. Pig (Sus scrofa) [TaxId: 9823] [57200] (31) picpic
    2. Coagulation factor VIIa [57201]
      1. Human (Homo sapiens) [TaxId: 9606] [57202] (19) picpic
        SQ P08709 108-202 ! SQ P08709 107-202
    3. E-selectin, EGF-domain [57203]
      1. Human (Homo sapiens) [TaxId: 9606] [57204] (5) picpic
    4. Factor X, N-terminal module [57205]
      1. Human (Homo sapiens) [TaxId: 9606] [57206] (75) picpic
        SQ P00742 127-178
      2. Cow (Bos taurus) [TaxId: 9913] [57207] (5) picpic
    5. Activated protein c (autoprothrombin IIa) [57208]
      1. Human (Homo sapiens) [TaxId: 9606] [57209] (1) picpic
    6. Prostaglandin H2 synthase-1, EGF-like module [57210]
      the rest of protein is heme-linked peroxidase, all-alpha fold
      1. Sheep (Ovis aries) [TaxId: 9940] [57211] (22) picpic
        SQ P05979 32-584
      2. Mouse (Mus musculus) [TaxId: 10090] [57212] (8) picpic
    7. P-selectin, EGF-domain [57213]
      1. Human (Homo sapiens) [TaxId: 9606] [57214] (1) picpic
    8. Epidermal growth factor, EGF [57215]
      1. Mouse (Mus musculus) [TaxId: 10090] [57216] (8) picpic
      2. Human (Homo sapiens) [TaxId: 9606] [69939] (4) picpic
    9. Transforming growth factor alpha [57217]
      1. Human (Homo sapiens) [TaxId: 9606] [57218] (6) picpic
    10. Epiregulin, EGF-domain [103561]
      1. Human (Homo sapiens) [TaxId: 9606] [103562] (2) picpic
    11. Betacellulin-2 [75670]
      1. Human (Homo sapiens) [TaxId: 9606] [75671] (2) picpic
    12. Heparin-binding epidermal growth factor, HBEGF [57219]
      extracellular domain
      1. Human (Homo sapiens) [TaxId: 9606] [57220] (1) picpic
    13. Plasminogen activator (urokinase-type) [57221]
      1. Human (Homo sapiens) [TaxId: 9606] [57222] (12) picpic
    14. Heregulin-alpha, EGF-like domain [57223]
      1. Human (Homo sapiens) [TaxId: 9606] [57224] (4) picpic
    15. Thrombomodulin, different EGF-like domains [57225]
      1. Human (Homo sapiens) [TaxId: 9606] [57226] (6) picpic
    16. Fibrillin-1 [57227]
      duplication: contains 47 EFG-like domains
      1. Human (Homo sapiens) [TaxId: 9606] [57228] (8) picpic
    17. Mannose-binding protein associated serine protease 2, MASP2 [90141]
      EGF-like domain separates two CUB domains
      1. Rat (Rattus norvegicus) [TaxId: 10116] [90142] (1) picpic
      2. Human (Homo sapiens) [TaxId: 9606] [111402] (1) picpic
        SQ O00187 17-181
    18. Complement C1S component [90143]
      1. Human (Homo sapiens) [TaxId: 9606] [90144] (1) picpic
    19. Complement protease C1R [57229]
      1. Human (Homo sapiens) [TaxId: 9606] [57230] (1) picpic
    20. Plasminogen activator (tissue-type), t-PA [57231]
      1. Human (Homo sapiens) [TaxId: 9606] [57232] (1) picpic
    21. Low density lipoprotein (LDL) receptor, different EGF domains [64539]
      1. Human (Homo sapiens) [TaxId: 9606] [64540] (7) picpic
        SQ P01130 272-353
    22. Neurogenic locus notch homolog protein 1, Notch1 [118243]
      1. Human (Homo sapiens) [TaxId: 9606] [118244] (4) picpic
        SQ P46531 411-526
  2. Integrin beta EGF-like domains [69940] (1)
    1. Integrin beta EGF-like domains [69941]
      1. Human (Homo sapiens) [TaxId: 9606] [69942] (5) picpic
        SQ P05106 27-716
  3. EGF-like domain of nidogen-1 [64541] (1)
    1. EGF-like domain of nidogen-1 [64542]
      1. Mouse (Mus musculus) [TaxId: 10090] [64543] (2) picpic
  4. Laminin-type module [57233] (1)
    1. Laminin gamma1 chain [57234]
      1. Mouse (Mus musculus) [TaxId: 10090] [57235] (3) picpic
  5. Follistatin (FS) module N-terminal domain, FS-N [57236] (2)
    1. Domain of BM-40/SPARC/osteonectin [57237]
      the N-terminal part of FS module
      1. Human (Homo sapiens) [TaxId: 9606] [57238] (2) picpic
    2. Domain of follistatin [90145]
      the N-terminal part of the heparin-binding module, FS1
      1. Rat (Rattus norvegicus) [TaxId: 10116] [90146] (3) picpic
  6. Merozoite surface protein 1 (MSP-1) [57239] (3)
    1. Merozoite surface protein 1 (MSP-1) [57240]
      1. Malaria parasite (Plasmodium cynomolgi) [TaxId: 5827] [57241] (1) picpic
      2. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [57242] (3) picpic
      3. Malaria parasite (Plasmodium knowlesi) [TaxId: 5850] [82892] (1) picpic
  7. Cripto EGF-like domain-like [144100] (1)
    1. Cripto growth factor [144101]
      Teratocarcinoma-derived growth factor
      1. Mouse (Mus musculus) [TaxId: 10090] [144102] (1) picpic
        SQ P51865 96-134
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk