Structural Classification of Proteins
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Superfamily: TNF receptor-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: TNF receptor-like [57585]
    duplication: consists of three similar disulfide-rich domains
  4. Superfamily: TNF receptor-like [57586]
    link to SUPERFAMILY database - Superfamily

Families:

  1. TNF receptor-like [57587] (5)
    Pfam 00020; TNFR/NGFR cysteine-rich region
    1. Tumor necrosis factor (TNF) receptor [57588]
      1. Human (Homo sapiens) [TaxId: 9606] [57589] (4) picpic
    2. Death receptor-5 (dr5) fragment [57590]
      1. Human (Homo sapiens) [TaxId: 9606] [57591] (12) picpic
    3. Cellular receptor HveA [64568]
      1. Human (Homo sapiens) [TaxId: 9606] [64569] (5) picpic
    4. Low affinity neurotrophin receptor p75NTR [111413]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [111414] (9) picpic
        SQ P07174 31-190 # fragment contains 3 complete and 1 partial (C-terminal) 'domains'
    5. Tumor necrosis factor receptor superfamily member 4, OX40L receptor [144119]
      1. Human (Homo sapiens) [TaxId: 9606] [144120] (9) picpic
        SQ P43489 143-168! SQ P43489 29-82! SQ P43489 83-142
  2. BAFF receptor-like [90174] (3)
    only fragments of the receptor structures are available; no domain division is provided here
    1. Tumor necrosis factor receptor superfamily member 13c, BAFF-R, Br3 [90175]
      1. Human (Homo sapiens) [TaxId: 9606] [90176] (2) picpic
        also includes the PDB entry (1p0t) that together with the entry (1otz) provides the multimeric structure of the complex of BAFF receptor with BAFF. In these entries protein chains are designated by both upper case and lower case letters creating problems with its processing and presentation in SCOP
    2. Tumor necrosis factor receptor superfamily member 17, BCMA [90177]
      1. Human (Homo sapiens) [TaxId: 9606] [90178] (2) picpic
        SQ Q02223 8-43
    3. Tumor necrosis factor receptor superfamily member 13B, TACI [118262]
      1. Human (Homo sapiens) [TaxId: 9606] [118263] (2) picpic
        SQ O14836 68-109
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk