Structural Classification of Proteins
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Family: Nuclear receptor

duplication: two zinc-binding motifs

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Glucocorticoid receptor-like (DNA-binding domain) [57715]
    alpha+beta metal(zinc)-bound fold
  4. Superfamily: Glucocorticoid receptor-like (DNA-binding domain) [57716]
    link to SUPERFAMILY database - Superfamily
  5. Family: Nuclear receptor [57721]
    duplication: two zinc-binding motifs

Protein Domains:

  1. Retinoid X receptor (RXR-alpha) DNA-binding domain [57722]
    1. Human (Homo sapiens) [TaxId: 9606] [57723] (7)
      1. 1dsz picpicxref
        complexed with zn
        1. chain b [45108] picpiclink
      2. 2han picpicxref
        automatically matched to d2nlla_
        complexed with zn
        1. region a:7-72 [136291] picpiclink
      3. 2nll picpicxref
        protein/DNA complex; complexed with 5iu, zn
        1. chain a [45109] picpiclink
      4. 1by4 picpic
        1. chain a [45110] picpiclink
        2. chain b [45111] picpiclink
        3. chain c [45112] picpiclink
        4. chain d [45113] picpiclink
      5. 1r0n picpicxref
        complexed with zn
        1. chain a [96730] picpiclink
      6. 1ynw picpicxref
        automatically matched to d2nlla_
        complexed with zn; mutant
        1. region b:235-300 [123763] picpiclink
      7. 1rxr picpic
        complexed with zn; mutant
        1. chain a [45114] picpiclink
  2. Thyroid hormone receptor (TR-beta) DNA-binding domain [57724]
    1. Human (Homo sapiens) [TaxId: 9606] [57725] (1)
      1. 2nll picpicxref
        protein/DNA complex; complexed with 5iu, zn
        1. chain b [45115] picpiclink
  3. Orphan nuclear receptor NGFI-B DNA-binding domain [57726]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [57727] (1)
      1. 1cit picpic
        protein/DNA complex; complexed with zn
        1. chain a [45116] picpiclink
  4. Estrogen receptor DNA-binding domain [57728]
    1. Human and chicken (Homo sapiens) and (Gallus gallus) [TaxId: 9606] [57729] (2)
      identical sequences
      1. 1hcq picpic
        protein/DNA complex; complexed with zn
        1. chain a [45117] picpiclink
        2. chain b [45118] picpiclink
        3. chain e [45119] picpiclink
        4. chain f [45120] picpiclink
      2. 1hcp picpic
        complexed with zn
        1. chain a [45121] picpiclink
  5. Steroid hormone receptor Err2 DNA-binding domain [90201]
    1. Human (Homo sapiens) [TaxId: 9606] [90202] (1)
      1. 1lo1 picpic
        complexed with zn; mutant
        1. chain a [84649] picpiclink
  6. Ecdysone receptor DNA-binding domain [103601]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [103602] (3)
      1. 2han picpicxref
        automatically matched to d1r0nb_
        complexed with zn
        1. region b:5-87 [136292] picpiclink
      2. 1r0o picpicxref
        complexed with zn
        1. chain b [96733] picpiclink
      3. 1r0n picpicxref
        complexed with zn
        1. chain b [96731] picpiclink
  7. Ultraspiracle protein [103603]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [103604] (1)
      1. 1r0o picpicxref
        complexed with zn
        1. chain a [96732] picpiclink
  8. Glucocorticoid receptor DNA-binding domain [57730]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [57731] (7)
      1. 1lat picpic
        protein/DNA complex; complexed with zn; mutant
        1. chain a [45122] picpiclink
        2. chain b [45123] picpiclink
      2. 1r4o picpic
        complexed with zn
        1. chain a [97023] picpiclink
        2. chain b [97024] picpiclink
      3. 1glu picpic
        protein/DNA complex; complexed with zn
        1. chain a [45124] picpiclink
        2. chain b [45125] picpiclink
      4. 1r4r picpic
        complexed with zn
        1. chain a [97043] picpiclink
        2. chain b [97044] picpiclink
      5. 1gdc picpic
        complexed with zn
        1. chain a [45127] picpiclink
      6. 2gda picpic
        complexed with zn
        1. chain a [45126] picpiclink
      7. 1rgd picpic
        complexed with zn
        1. chain a [45128] picpiclink
  9. Retinoic acid receptor DNA-binding domain [57732]
    1. Human (Homo sapiens) [TaxId: 9606] [57733] (2)
      1. 1dsz picpicxref
        complexed with zn
        1. chain a [45129] picpiclink
      2. 1hra picpic
        complexed with zn
        1. chain a [45130] picpiclink
  10. Orphan nuclear receptor reverb DNA-binding domain [57734]
    1. Human (Homo sapiens) [TaxId: 9606] [57735] (3)
      1. 1a6y picpic
        complexed with 5it, zn; mutant
        1. chain a [45131] picpiclink
        2. chain b [45132] picpiclink
      2. 1ga5 picpic
        complexed with 5it, zn
        1. chain a [65173] picpiclink
        2. chain b [65174] picpiclink
        3. chain e [65175] picpiclink
        4. chain f [65176] picpiclink
      3. 1hlz picpic
        complexed with zn
        1. chain a [65856] picpiclink
        2. chain b [65857] picpiclink
  11. Vitamin D3 receptor, VDR, DNA-binding domain [75686]
    1. Human (Homo sapiens) [TaxId: 9606] [75687] (4)
      1. 1kb2 picpic
        complexed with zn
        1. chain a [72267] picpiclink
        2. chain b [72268] picpiclink
      2. 1kb6 picpic
        complexed with zn
        1. chain a [72273] picpiclink
        2. chain b [72274] picpiclink
      3. 1kb4 picpic
        complexed with zn
        1. chain a [72271] picpiclink
        2. chain b [72272] picpiclink
      4. 1ynw picpicxref
        complexed with zn; mutant
        1. region a:18-113 [144707] picpiclink
  12. Androgen receptor [111439]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [111440] (1)
      SQ P15207 538-611
      1. 1r4i picpic
        complexed with zn; mutant
        1. chain a [104801] picpiclink
        2. chain b [104802] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk