Structural Classification of Proteins
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Family: U-box

Associated with multi-ubiquitination; lacks the RING-domain metal ion-binding residues

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: RING/U-box [57849]
    dimetal(zinc)-bound alpha+beta motif; structurally diverse
  4. Superfamily: RING/U-box [57850]
    link to SUPERFAMILY database - Superfamily
  5. Family: U-box [90222]
    Associated with multi-ubiquitination; lacks the RING-domain metal ion-binding residues

Protein Domains:

  1. Pre-mRNA splicing factor Prp19 [90223]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [90224] (7)
      1. 2bay picpic
        automatically matched to d1n87a_
        1. region a:1-56 [128251] picpiclink
      2. 2bay picpic
        automatically matched to d1n87a_
        1. region b:1-56 [128252] picpiclink
      3. 2bay picpic
        automatically matched to d1n87a_
        1. region c:1-55 [128253] picpiclink
      4. 2bay picpic
        automatically matched to d1n87a_
        1. region d:1-55 [128254] picpiclink
      5. 2bay picpic
        automatically matched to d1n87a_
        1. region e:1-56 [128255] picpiclink
      6. 2bay picpic
        automatically matched to d1n87a_
        1. region f:1-56 [128256] picpiclink
      7. 1n87 picpic
        1. chain a [85390] picpiclink
  2. E3 ubiquitin ligase PUB14 [111461]
    Armadillo repeat containing protein
    1. Thale-cress (Arabidopsis thaliana) [TaxId: 3702] [111462] (1)
      SQ Q8VZ40 249-321
      1. 1t1h picpic
        1. chain a [106247] picpiclink
  3. Ubiquitin conjugation factor E4A [118298]
    1. Human (Homo sapiens) [TaxId: 9606] [118299] (1)
      SQ Q14139 977-1061
      1. 1wgm picpic
        Structural genomics target
        1. chain a [114616] picpiclink
  4. STIP1 homology and U box-containing protein 1, STUB1 [144224]
    1. Mouse (Mus musculus) [TaxId: 10090] [144225] (8)
      SQ Q9WUD1 225-304! SQ Q9WUD1 227-301
      1. 2c2l picpicxrefxrefxrefxref
        complexed with ni, so4
        1. region a:225-304 [129673] picpiclink
      2. 2c2l picpicxrefxrefxrefxref
        automatically matched to 2C2L A:225-304
        complexed with ni, so4
        1. region b:225-304 [129675] picpiclink
      3. 2c2l picpicxrefxrefxrefxref
        automatically matched to 2C2L A:225-304
        complexed with ni, so4
        1. region c:225-304 [129677] picpiclink
      4. 2c2l picpicxrefxrefxrefxref
        automatically matched to 2C2L A:225-304
        complexed with ni, so4
        1. region d:225-304 [129679] picpiclink
      5. 2c2v picpicxrefxrefxrefxrefxrefxrefxrefxref
        1. region s:227-301 [129694] picpiclink
      6. 2c2v picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2C2V S:227-301
        1. region t:227-301 [129695] picpiclink
      7. 2c2v picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2C2V S:227-301
        1. region u:227-299 [129696] picpiclink
      8. 2c2v picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2C2V S:227-301
        1. region v:229-299 [129697] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk