Fold: Parallel coiled-coil

this is not a true fold; includes oligomers of shorter identical helices

Lineage:

1. Root: scop
2. Class: Coiled coil proteins [57942]
   Not a true class
3. Fold: Parallel coiled-coil [57943]
   this is not a true fold; includes oligomers of shorter identical helices

Superfamilies:

1. Triple coiled coil domain of C-type lectins [57944] (1)
   uperfamily
   1. Triple coiled coil domain of C-type lectins [57945] (5)
2. Trimerization domain of TRAF [57953] (1)
   uperfamily
   1. Trimerization domain of TRAF [57954] (2)
3. Leucine zipper domain [57959] (1)
   uperfamily
   1. Leucine zipper domain [57960] (18)
4. Inovirus (filamentous phage) major coat protein [57987] (1)
   uperfamily
   1. Inovirus (filamentous phage) major coat protein [57988] (8)
5. Tropomyosin [57997] (1)
   uperfamily
   1. Tropomyosin [57998] (5)
6. Chicken cartilage matrix protein [58002] (1)
   uperfamily
   1. Chicken cartilage matrix protein [58003] (1)
7. Assembly domain of cartilage oligomeric matrix protein [58006] (1)
   uperfamily
   1. Assembly domain of cartilage oligomeric matrix protein [58007] (1)
8. Fibrinogen coiled-coil and central regions [58010] (1)
   uperfamily
   1. Fibrinogen coiled-coil and central regions [58011] (12)
      in the central region two triple coiled-coils are stacked end-to-end and interlock with N-terminal tails
9. Coiled-coil domain of nucleotide exchange factor GrpE [58014] (1)
   uperfamily
   1. Coiled-coil domain of nucleotide exchange factor GrpE [58015] (1)
10. Coiled-coil dimerization domain from cortexillin I [58018] (1)
    uperfamily
    1. Coiled-coil dimerization domain from cortexillin I [58019] (1)
11. XRCC4, C-terminal oligomerization domain [58022] (1)
    uperfamily
    1. XRCC4, C-terminal oligomerization domain [58023] (1)
12. Intermediate filament protein, coiled coil region [64593] (1)
    uperfamily
    1. Intermediate filament protein, coiled coil region [64594] (2)
       C-terminal part of Pfam 00038
13. Delta-sleep-inducing peptide immunoreactive peptide [58026] (1)
    uperfamily
    1. Delta-sleep-inducing peptide immunoreactive peptide [58027] (1)
14. Rotavirus nonstructural proteins [58030] (2)
    not a true superfamily
    uperfamily
    1. NSP4 oligomerization domain [58031] (1)
    2. NSP3 C-terminal domain, NS34 [75699] (1)
15. Multimerization domain of the phosphoprotein from sendai virus [58034] (1)
    uperfamily
    1. Multimerization domain of the phosphoprotein from sendai virus [58035] (1)
16. SNARE fusion complex [58038] (1)
    tetrameric parallel coiled coil
    uperfamily
    1. SNARE fusion complex [58039] (18)
17. Outer membrane lipoprotein [58042] (1)
    uperfamily
    1. Outer membrane lipoprotein [58043] (1)
18. Fibritin [58046] (1)
    uperfamily
    1. Fibritin [58047] (1)
19. N-terminal coiled coil domain from apc [58050] (1)
    uperfamily
    1. N-terminal coiled coil domain from apc [58051] (1)
20. Tetrabrachion [58054] (1)
    uperfamily
    1. Tetrabrachion [58055] (1)
21. Eea1 homodimerisation domain [69979] (1)
    uperfamily
    1. Eea1 homodimerisation domain [69980] (1)
22. Mitotic arrest deficient-like 1, Mad1 [75704] (1)
    uperfamily
    1. Mitotic arrest deficient-like 1, Mad1 [75705] (1)
23. Dimerization motif of sir4 [90242] (1)
    uperfamily
    1. Dimerization motif of sir4 [90243] (1)
24. Head morphogenesis protein gp7 [90246] (1)
    uperfamily
    1. Head morphogenesis protein gp7 [90247] (1)
25. Troponin coil-coiled subunits [90250] (2)
    form heterodimeric coiled coil
    uperfamily
    1. Troponin T [90251] (2)
    2. Troponin I [90254] (2)
26. Myosin rod fragments [90257] (1)
    uperfamily
    1. Myosin rod fragments [90258] (2)
27. G protein-binding domain [103652] (2)
    uperfamily
    1. RhoA-binding domain [103653] (2)
    2. Rabaptin-5 [118367] (1)
28. Geminin coiled-coil domain [111469] (1)
    uperfamily
    1. Geminin coiled-coil domain [111470] (2)
29. Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain [118370] (1)
    tetrameric parallel coiled coil with a right-handed twist
    uperfamily
    1. Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain [118371] (1)
30. MPN010-like [144266] (1)
    segmented trimeric coiled coil
    uperfamily
    1. MPN010-like [144267] (1)
       Pfam 01519; DUF16
31. Eferin C-derminal domain-like [144270] (1)
    uperfamily
    1. Eferin C-derminal domain-like [144271] (2)
       contains PfamB 042332, PfamB 026102
32. Heterotrimerisation domain of extracellular hemoglobin linker subunits [144276] (1)
    uperfamily
    1. Heterotrimerisation domain of extracellular hemoglobin linker subunits [144277] (3)
33. Sec2 N-terminal region [144284] (1)
    dimeric coiled coil
    uperfamily
    1. Sec2 N-terminal region [144285] (1)
34. RILP dimerisation region [161256] (1)
    1. RILP dimerisation region [161257] (1)

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk