Structural Classification of Proteins
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Fold: Stalk segment of viral fusion proteins

core: trimeric coiled coil

Lineage:

  1. Root: scop
  2. Class: Coiled coil proteins [57942]
    Not a true class
  3. Fold: Stalk segment of viral fusion proteins [58063]
    core: trimeric coiled coil

Superfamilies:

  1. Influenza hemagglutinin (stalk) [58064] (1)
    link to SUPERFAMILY database - Superfamily
    1. Influenza hemagglutinin (stalk) [58065] (2)
      1. Influenza hemagglutinin (stalk) [58066]
        trimer
        1. Influenza A virus, different strains [TaxId: 11320] [58067] (48) picpic
        2. Influenza C virus [TaxId: 11552] [58068] (1) picpic
  2. Virus ectodomain [58069] (1)
    link to SUPERFAMILY database - Superfamily
    1. Virus ectodomain [58070] (12)
      1. Retrovius gp41 protease-resistant core [58071]
        coiled coil; biological unit: trimer
        1. Human immunodeficiency virus type 1 [TaxId: 11676] [58072] (22) picpic
        2. Simian immunodeficiency virus [TaxId: 11723] [58073] (10) picpic
        3. Visna virus [TaxId: 11741] [64597] (1) picpic
        4. synthetic construct [161260] (1) picpic
      2. HTLV-1 gp21 [58074]
        1. Human T-cell leukemia virus type 1 [TaxId: 11908] [58075] (1) picpic
      3. Core structure of Ebo gp2 [58076]
        1. Ebola virus [TaxId: 205488] [58077] (2) picpic
      4. MoMLV p15 core fragment [58627]
        1. Moloney murine leukemia virus, MoMLV [TaxId: 11801] [58628] (1) picpic
      5. Paramyxovirus sv5 fusion protein core [58078]
        trimer of heterodimers
        1. Simian virus 5, strain w3 [TaxId: 11207] [58079] (1) picpic
      6. Stalk of the ectodomain of NDV fusion glycoprotein [69983]
        1. Newcastle disease virus [TaxId: 11176] [69984] (1) picpic
      7. HRSV fusion protein core [58080]
        1. Human respiratory syncytial virus [TaxId: 11250] [58081] (1) picpic
      8. HERV-FRD_6p24.1 provirus ancestral Env polyprotein [144288]
        1. Human (Homo sapiens) [TaxId: 9606] [144289] (3) picpic
          SQ P60508 391-443
      9. Fusion glycoprotein f0 [161261]
        1. Mumps virus [TaxId: 11161] [161262] (1) picpic
          SQ P11236 123-179,448-479
  3. Coronavirus S2 glycoprotein [111474] (1)
    link to SUPERFAMILY database - Superfamily
    1. Coronavirus S2 glycoprotein [111475] (2)
      Pfam 01601
      1. E2 spike glycoprotein [111476]
        1. Murine hepatitis virus, MHV [TaxId: 11138] [111477] (2) picpic
          SQ P11224 969-1024,1224-1254
        2. Human coronavirus (strain SARS) [TaxId: 227859] [111478] (20) picpic
          SQ P59594 896-972,1142-1183
          SQ Q6UZF0 914-949,1148-1193
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk