Structural Classification of Proteins
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Superfamily: Coronavirus S2 glycoprotein

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Coiled coil proteins [57942]
    Not a true class
  3. Fold: Stalk segment of viral fusion proteins [58063]
    core: trimeric coiled coil
  4. Superfamily: Coronavirus S2 glycoprotein [111474]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Coronavirus S2 glycoprotein [111475] (2)
    Pfam 01601
    1. E2 spike glycoprotein [111476]
      1. Murine hepatitis virus, MHV [TaxId: 11138] [111477] (2)
        SQ P11224 969-1024,1224-1254
        1. 1wdg picpic
          1. chain a [109248] picpiclink
          2. chain b [109249] picpiclink
        2. 1wdf picpic
          1. chain a [109246] picpiclink
          2. chain b [109247] picpiclink
      2. Human coronavirus (strain SARS) [TaxId: 227859] [111478] (20)
        SQ P59594 896-972,1142-1183
        SQ Q6UZF0 914-949,1148-1193
        1. 1zva picpic
          1. region a:1-75 [125701] picpiclink
        2. 1zvb picpic
          1. region a:1-34 [125702] picpiclink
        3. 1zv7 picpic
          1. region a:1-38 [125692] picpiclink
        4. 1zvb picpic
          automatically matched to 1ZVB A:1-34
          1. region b:2-34 [125703] picpiclink
        5. 1zvb picpic
          automatically matched to 1ZVB A:1-34
          1. region c:1-34 [125704] picpiclink
        6. 1zv7 picpic
          automatically matched to 1ZV7 A:1-38
          1. region b:4-36 [125693] picpiclink
        7. 2beq picpic
          1. chain a,d [116703] picpiclink
          2. chain b,e [116704] picpiclink
          3. chain c,f [116705] picpiclink
        8. 2bez picpic
          1. chain c,f [116716] picpiclink
        9. 1zv8 picpic
          1. region a:1-49,b:5-31 [125694] picpiclink
        10. 1zv8 picpic
          1. region c:2-47,d:5-33 [125695] picpiclink
        11. 1zv8 picpic
          1. region e:1-49,f:4-33 [125696] picpiclink
        12. 1zv8 picpic
          1. region g:1-50,h:1-34 [125697] picpiclink
        13. 1zv8 picpic
          1. region i:1-49,j:4-33 [125698] picpiclink
        14. 1zv8 picpic
          1. region k:1-50,l:3-36 [125699] picpiclink
        15. 1wyy picpic
          1. region a:890-973,a:1147-1188 [121469] picpiclink
        16. 1wyy picpic
          automatically matched to 1WYY A:890-973,A:1147-1188
          1. region b:892-973,b:1147-1188 [121470] picpiclink
        17. 1wnc picpic
          1. chain a [109428] picpiclink
          2. chain b [109429] picpiclink
          3. chain c [109430] picpiclink
          4. chain d [109431] picpiclink
          5. chain e [109432] picpiclink
          6. chain f [109433] picpiclink
        18. 2fxp picpic
          1. region a:2-55 [134332] picpiclink
        19. 2fxp picpic
          automatically matched to 2FXP A:2-55
          1. region b:2-55 [134333] picpiclink
        20. 2fxp picpic
          automatically matched to 2FXP A:2-55
          1. region c:2-55 [134334] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk