Structural Classification of Proteins
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Fold: Spectrin repeat-like

3 helices; bundle, closed, left-handed twist; up-and-down

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Spectrin repeat-like [46965]
    3 helices; bundle, closed, left-handed twist; up-and-down

Superfamilies:

  1. Spectrin repeat [46966] (1)
    link to SUPERFAMILY database - Superfamily
    1. Spectrin repeat [46967] (5)
      1. Spectrin alpha chain [46968]
        1. Drosophila sp. [TaxId: 7242] [46969] (1)
          1. 2spc picpic
            the crystal structure is an intertwined dimer
            1. chain a [16311] picpiclink
            2. chain b [16312] picpiclink
        2. Chicken (Gallus gallus) [TaxId: 9031] [46970] (4)
          SQ P07751 1662-1981
          1. 1u5p picpic
            repeats 15 and 16
            complexed with k, po4
            1. region a:1662-1771 [113046] picpiclink
            2. region a:1772-1872 [113047] picpiclink
          2. 1cun picpic
            repeats 16 and 17
            mutant
            1. region a:7-115 [16313] picpiclink
            2. region a:116-219 [16314] picpiclink
            3. region b:7-115 [16315] picpiclink
            4. region b:116-219 [16316] picpiclink
            5. region c:7-115 [16317] picpiclink
            6. region c:116-219 [16318] picpiclink
          3. 1u4q picpic
            repeats 15, 16 and 17
            1. region a:1665-1771 [113024] picpiclink
            2. region a:1772-1878 [113025] picpiclink
            3. region a:1879-1979 [113026] picpiclink
            4. region b:1665-1771 [113027] picpiclink
            5. region b:1772-1878 [113028] picpiclink
            6. region b:1879-1979 [113029] picpiclink
          4. 1aj3 picpic
            monomeric NMR structure
            1. chain a [16319] picpiclink
        3. Human (Homo sapiens) [TaxId: 9606] [101077] (1)
          1. 1owa picpic
            N-terminal repeat; includes extra N-terminal helix; tetramerisation region
            1. chain a [93640] picpiclink
      2. Spectrin beta chain [101078]
        1. Human (Homo sapiens) [TaxId: 9606] [101079] (1)
          1. 1s35 picpic
            complexed with so4; mutant
            1. region a:1063-1168 [98420] picpiclink
            2. region a:1169-1273 [98421] picpiclink
      3. alpha-actinin [46971]
        1. Human (Homo sapiens) [TaxId: 9606] [46972] (2)
          1. 1quu picpic
            two central spectrin-like repeats
            1. region a:1-124 [16320] picpiclink
            2. region a:125-248 [16321] picpiclink
          2. 1hci picpic
            the rod domain: homodimer of four-repeat fragments
            1. region a:272-396 [60950] picpiclink
            2. region a:397-511 [60951] picpiclink
            3. region a:512-632 [60952] picpiclink
            4. region a:633-746 [60953] picpiclink
            5. region b:272-396 [60954] picpiclink
            6. region b:397-511 [60955] picpiclink
            7. region b:512-632 [60956] picpiclink
            8. region b:633-746 [60957] picpiclink
  2. Enzyme IIa from lactose specific PTS, IIa-lac [46973] (1)
    link to SUPERFAMILY database - Superfamily
    1. Enzyme IIa from lactose specific PTS, IIa-lac [46974] (1)
      form trimers with 9 helices in a bundle
      1. Enzyme IIa from lactose specific PTS, IIa-lac [46975]
        1. Lactococcus lactis [TaxId: 1358] [46976] (2)
          1. 2e2a picpic
            mutant
            1. chain a [88499] picpiclink
            2. chain b [88500] picpiclink
            3. chain c [88501] picpiclink
          2. 1e2a picpic
            complexed with mg
            1. chain a [16322] picpiclink
            2. chain b [16323] picpiclink
            3. chain c [16324] picpiclink
  3. Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain [46977] (1)
    link to SUPERFAMILY database - Superfamily
    1. Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain [46978] (5)
      1. L-aspartate oxidase [46979]
        1. Escherichia coli [TaxId: 562] [46980] (3)
          1. 1chu picpicxrefxref
            1. region a:423-533 [16325] picpiclink
          2. 1knr picpicxrefxref
            complexed with cl, fad, na; mutant
            1. region a:423-533 [72788] picpiclink
          3. 1knp picpicxrefxref
            complexed with fad, na, sin; mutant
            1. region a:423-533 [72783] picpiclink
      2. Succinate dehydogenase [81708]
        1. Escherichia coli [TaxId: 562] [81709] (2)
          1. 1nek picpicxrefxrefxrefxrefxrefxref
            complexed with ca, cdn, eph, f3s, fad, fes, fs4, hem, oaa, uq2
            1. region a:451-588 [80426] picpiclink
          2. 1nen picpicxrefxrefxrefxrefxrefxref
            complexed with ca, cdn, dnt, eph, f3s, fad, fes, fs4, hem, oaa
            1. region a:451-588 [80433] picpiclink
      3. Fumarate reductase [46981]
        1. Escherichia coli [TaxId: 562] [46982] (7)
          1. 1kf6 picpicxrefxrefxrefxrefxrefxref
            complexed with 1pe, act, ce1, f3s, fad, fes, fs4, hqo, k, oaa
            1. region a:443-576 [72394] picpiclink
            2. region m:443-576 [72401] picpiclink
          2. 1l0v picpicxrefxrefxrefxrefxrefxref
            complexed with ce1, f3s, fad, fes, fs4, mq7, oaa
            1. region a:443-576 [73412] picpiclink
            2. region m:443-576 [73419] picpiclink
          3. 1kfy picpicxrefxrefxrefxrefxrefxref
            complexed with brs, ce1, f3s, fad, fes, fs4, oaa
            1. region a:443-576 [72427] picpiclink
            2. region m:443-576 [72434] picpiclink
          4. 3cir picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1kf6a1
            complexed with f3s, fad, fes, sf4; mutant
            1. region a:443-576 [156679] picpiclink
          5. 3cir picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1kf6a1
            complexed with f3s, fad, fes, sf4; mutant
            1. region m:443-571 [156686] picpiclink
          6. 2b76 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1kf6a1
            complexed with f3s, fad, fes, flc, mq7, sf4; mutant
            1. region a:443-576 [128009] picpiclink
          7. 2b76 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1kf6a1
            complexed with f3s, fad, fes, flc, mq7, sf4; mutant
            1. region m:443-571 [128016] picpiclink
        2. Wolinella succinogenes [TaxId: 844] [46983] (8)
          1. 2bs2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1e7pa1
            complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
            1. region a:458-655 [129030] picpiclink
          2. 2bs2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1e7pa1
            complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
            1. region d:458-655 [129036] picpiclink
          3. 2bs3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1e7pa1
            complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
            1. region a:458-655 [129042] picpiclink
          4. 2bs3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1e7pa1
            complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
            1. region d:458-655 [129047] picpiclink
          5. 1qlb picpicxrefxrefxrefxrefxref
            1. region a:458-655 [16330] picpiclink
            2. region d:458-655 [16331] picpiclink
          6. 2bs4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1e7pa1
            complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
            1. region a:458-655 [129052] picpiclink
          7. 2bs4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1e7pa1
            complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
            1. region d:458-655 [129057] picpiclink
          8. 1e7p picpicxrefxrefxrefxrefxref
            complexed with f3s, fad, fes, fs4, hem, lmt, mla, na; mutant
            1. region a:458-655 [59347] picpiclink
            2. region d:458-655 [59353] picpiclink
            3. region g:458-655 [59359] picpiclink
            4. region j:458-655 [59365] picpiclink
      4. Adenylylsulfate reductase A subunit [68978]
        1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [68979] (2)
          1. 1jnr picpicxrefxrefxref
            complexed with fad, fs4, gol
            1. region a:503-643 [66966] picpiclink
            2. region c:503-643 [66970] picpiclink
          2. 1jnz picpicxrefxrefxref
            complexed with fad, fs4, so3
            1. region a:503-643 [71766] picpiclink
            2. region c:2503-2643 [71770] picpiclink
  4. Smac/diablo [46984] (1)
    link to SUPERFAMILY database - Superfamily
    1. Smac/diablo [46985] (1)
      1. Smac/diablo [46986]
        1. Human (Homo sapiens) [TaxId: 9606] [46987] (2)
          1. 1g73 picpicxref
            bound to xiap-bir3 domain
            complexed with zn; mutant
            1. chain a [16332] picpiclink
            2. chain b [16333] picpiclink
          2. 1few picpic
            1. chain a [16334] picpiclink
  5. BAG domain [63491] (1)
    link to SUPERFAMILY database - Superfamily
    1. BAG domain [63492] (6)
      Pfam 02179
      1. BAG-family molecular chaperon regulator-1, BAG1 [63493]
        1. Human (Homo sapiens) [TaxId: 9606] [63494] (1)
          1. 1hx1 picpicxref
            complexed with trs
            1. chain b [61350] picpiclink
        2. Mouse (Mus musculus) [TaxId: 10090] [63495] (1)
          1. 1i6z picpic
            1. chain a [61861] picpiclink
        3. Nematode (Caenorhabditis elegans) [TaxId: 6239] [109744] (1)
          SQ O44739 74-210
          1. 1t7s picpic
            Structural genomics target
            in the crystal, there is a tetramer made two helix-swapped dimers with an unusual beta-sheet interface
            mutant
            1. chain a [106636] picpiclink
            2. chain b [106637] picpiclink
      2. Silencer of death domains, Sodd (Bag4) [74699]
        1. Human (Homo sapiens) [TaxId: 9606] [74700] (2)
          1. 1m7k picpic
            1. chain a [74573] picpiclink
          2. 1m62 picpic
            1. chain a [74520] picpiclink
      3. BAG-family molecular chaperone regulator-3 [101080]
        Bcl2-associated athanogene 3
        1. Mouse (Mus musculus) [TaxId: 10090] [101081] (1)
          1. 1uk5 picpic
            1. chain a [99487] picpiclink
      4. BAG-family molecular chaperone regulator-5, BAG-5 [109745]
        1. Mouse (Mus musculus) [TaxId: 10090] [109746] (1)
          SQ Q8CI32 1-86
          1. 1ugo picpic
            Structural genomics target
            1. chain a [107830] picpiclink
  6. GAT-like domain [89009] (2)
    link to SUPERFAMILY database - Superfamily
    1. GAT domain [89010] (3)
      1. ADP-ribosylation factor binding protein Gga1 [89011]
        1. Human (Homo sapiens) [TaxId: 9606] [89012] (6)
          SQ Q9UJY5 211-299
          1. 1j2j picpicxref
            structure of a two-helical fragment bound to ARF1
            complexed with gtp, iod, mg; mutant
            1. chain b [84017] picpiclink
          2. 1o3x picpic
            1. chain a [86617] picpiclink
          3. 1x79 picpicxref
            complexed with dtt, so4
            1. chain a [114924] picpiclink
          4. 1nwm picpic
            1. chain x [86301] picpiclink
          5. 1oxz picpic
            1. chain a [87542] picpiclink
          6. 1naf picpic
            complexed with mse
            1. chain a [85487] picpiclink
      2. Target of Myb protein 1, TOM1 [158361]
        1. Human (Homo sapiens) [TaxId: 9606] [158362] (1)
          SQ O60784 215-307
          1. 1wrd picpicxref
            1. region a:215-307 [144565] picpiclink
      3. ADP-ribosylation factor binding protein Gga3 [158363]
        1. Human (Homo sapiens) [TaxId: 9606] [158364] (6)
          SQ Q9NZ52 208-299! SQ Q9NZ52 211-300
          1. 1wr6 picpicxrefxrefxrefxref
            1. region a:211-300 [144561] picpiclink
          2. 1wr6 picpicxrefxrefxrefxref
            automatically matched to 1WR6 A:211-300
            1. region b:215-300 [144562] picpiclink
          3. 1wr6 picpicxrefxrefxrefxref
            automatically matched to 1WR6 A:211-300
            1. region c:212-300 [144563] picpiclink
          4. 1wr6 picpicxrefxrefxrefxref
            automatically matched to 1WR6 A:211-300
            1. region d:215-300 [144564] picpiclink
          5. 1yd8 picpicxrefxref
            1. region g:208-299 [144631] picpiclink
          6. 1yd8 picpicxrefxref
            automatically matched to 1YD8 G:208-299
            1. region h:208-299 [144632] picpiclink
    2. Phosphoinositide-binding clathrin adaptor, domain 2 [100929] (2)
      this domain is associated with the N-terminal ENTH-like domain
      1. Clathrin assembly lymphoid myeloid leukaemia protein, Calm [100930]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [100931] (4)
          1. 1hf8 picpicxref
            1. region a:150-281 [90354] picpiclink
          2. 1hg5 picpicxref
            complexed with ihp
            1. region a:150-281 [90360] picpiclink
          3. 1hg2 picpicxref
            complex with inositol(4,5)p2
            complexed with ip2
            1. region a:150-281 [90358] picpiclink
          4. 1hfa picpicxref
            complexed with pio
            1. region a:150-281 [90356] picpiclink
      2. AP180 (Lap) [100932]
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [100933] (1)
          1. 1hx8 picpicxref
            complexed with so4
            1. region a:167-299 [90362] picpiclink
            2. region b:167-299 [90364] picpiclink
  7. Tubulin chaperone cofactor A [46988] (1)
    link to SUPERFAMILY database - Superfamily
    1. Tubulin chaperone cofactor A [46989] (2)
      the C-terminal helix is shorter that the other two helices
      1. Tubulin chaperone cofactor A [46990]
        1. Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932] [46991] (1)
          1. 1qsd picpic
            1. chain a [16335] picpiclink
            2. chain b [16336] picpiclink
        2. Human (Homo sapiens) [TaxId: 9606] [74701] (1)
          1. 1h7c picpic
            complexed with acy, mse, so4
            1. chain a [70914] picpiclink
  8. Ribosomal protein S20 [46992] (1)
    link to SUPERFAMILY database - Superfamily
    1. Ribosomal protein S20 [46993] (2)
      1. Ribosomal protein S20 [46994]
        1. Thermus thermophilus [TaxId: 274] [46995] (45)
          SQ P80380
          1. 2uub picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 6mz, cm0, k, mg, par, zn
            1. region t:8-106 [139951] picpiclink
          2. 2vqe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with k, mg, par, tm2, zn
            1. region t:8-106 [153444] picpiclink
          3. 1fjg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, scm, sry, zn
            1. chain t [16338] picpiclink
          4. 2vqf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with k, mg, par, tm2, zn
            1. region t:8-106 [153463] picpiclink
          5. 1j5e picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with unx, zn
            1. chain t [71563] picpiclink
          6. 2uxc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with k, mg, par, zn
            1. region t:8-106 [140023] picpiclink
          7. 2uuc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 6mz, cm0, k, mg, par, zn
            1. region t:8-106 [139971] picpiclink
          8. 2uua picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 6mz, cm0, k, mg, par, zn
            1. region t:8-106 [139931] picpiclink
          9. 1xmq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, t6a, zn
            1. chain t [115549] picpiclink
          10. 1n32 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, psu, zn
            1. chain t [79889] picpiclink
          11. 2uu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 6mz, cm0, k, mg, par, zn
            1. region t:8-106 [139911] picpiclink
          12. 1xnq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, zn
            1. chain t [115623] picpiclink
          13. 1xnr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, zn
            1. chain t [115645] picpiclink
          14. 1hr0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, zn
            1. chain t [16339] picpiclink
          15. 1hnz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with hyg, mg, zn
            1. chain t [16340] picpiclink
          16. 2j02 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 5mu, mg, par, zn
            1. region t:8-106 [137885] picpiclink
          17. 2j00 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 5mu, mg, par, zn
            1. region t:8-106 [137858] picpiclink
          18. 2uxd picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with k, mg, par, zn
            1. region t:8-106 [152300] picpiclink
          19. 1xmo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, mnu, par, t6a, zn
            1. chain t [115519] picpiclink
          20. 1hnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, tac, zn
            1. chain t [16341] picpiclink
          21. 2e5l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with zn
            1. region t:8-106 [132044] picpiclink
          22. 3d5a picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with mg, zn
            1. region t:8-106 [157353] picpiclink
          23. 3d5c picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with mg, zn
            1. region t:8-106 [157383] picpiclink
          24. 1i94 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, wo2, zn
            1. chain t [62011] picpiclink
          25. 1hnx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, pcy, zn
            1. chain t [16342] picpiclink
          26. 1n33 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, psu, zn
            1. chain t [79911] picpiclink
          27. 2hhh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with ksg
            1. region t:8-106 [136496] picpiclink
          28. 1i96 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, wo2, zn
            1. chain t [62055] picpiclink
          29. 2uxb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with k, mg, par, zn
            1. region t:8-106 [152281] picpiclink
          30. 1n34 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. chain t [79933] picpiclink
          31. 2v46 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 5mu, mg, zn
            1. region t:8-106 [152502] picpiclink
          32. 2v48 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            complexed with 5mu, mg, zn
            1. region t:8-106 [152538] picpiclink
          33. 1i97 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, tac, wo2, zn
            1. chain t [62078] picpiclink
          34. 1n36 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. chain t [79956] picpiclink
          35. 1i95 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with ede, mg, wo2, zn
            1. chain t [62033] picpiclink
          36. 2f4v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with ab9, d2c, k, mg, zn
            1. region t:8-106 [132957] picpiclink
          37. 2qnh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
            1. region u:8-106 [150944] picpiclink
          38. 2hgp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            1. region w:8-106 [136439] picpiclink
          39. 2hgi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            1. region w:8-106 [136418] picpiclink
          40. 2hgr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1i94t_
            1. region w:8-106 [136460] picpiclink
          41. 2ow8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
            1. region u:8-106 [139418] picpiclink
          42. 1yl4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            1. region w:8-106 [123616] picpiclink
          43. 2b64 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with psu, yyg
            1. region t:8-106 [127952] picpiclink
          44. 2b9o picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with psu, yyg
            1. region t:8-106 [128182] picpiclink
          45. 2b9m picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgt_
            complexed with psu, yyg
            1. region t:8-106 [128145] picpiclink
        2. Escherichia coli [TaxId: 562] [158365] (26)
          SQ P0A7U7 2-86
          1. 2gy9 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            1. region t:4-86 [145239] picpiclink
          2. 2gyb picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            1. region t:4-86 [145261] picpiclink
          3. 2qal picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, nmy
            1. region t:2-86 [150232] picpiclink
          4. 2qan picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, nmy
            1. region t:2-86 [150286] picpiclink
          5. 2qbf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [150506] picpiclink
          6. 2qbd picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [150452] picpiclink
          7. 1vs5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with ksg, mg
            1. region t:2-86 [144454] picpiclink
          8. 3df1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with hyg, mg
            1. region t:2-86 [157622] picpiclink
          9. 3df3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with hyg, mg
            1. region t:2-86 [157676] picpiclink
          10. 1vs7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with ksg, mg
            1. region t:2-86 [144495] picpiclink
          11. 2qoy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, nmy, scm
            1. region t:2-86 [151109] picpiclink
          12. 2qp0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, nmy, scm
            1. region t:2-86 [151162] picpiclink
          13. 2avy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            Representative structure
            complexed with mg
            1. region t:2-86 [144861] picpiclink
          14. 2aw7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [144904] picpiclink
          15. 2qb9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with lll, mg
            1. region t:2-86 [150346] picpiclink
          16. 2qbb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with lll, mg
            1. region t:2-86 [150399] picpiclink
          17. 2i2p picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [145439] picpiclink
          18. 2i2u picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [145481] picpiclink
          19. 2qbh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with lll, mg
            1. region t:2-86 [150560] picpiclink
          20. 2qbj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with lll, mg
            1. region t:2-86 [150614] picpiclink
          21. 2qou picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, scm
            1. region t:2-86 [151003] picpiclink
          22. 2qow picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, scm
            1. region t:2-86 [151056] picpiclink
          23. 2z4m picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, par
            1. region t:2-86 [154124] picpiclink
          24. 2vho picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [153142] picpiclink
          25. 2z4k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg, par
            1. region t:2-86 [154070] picpiclink
          26. 2vhp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY T:2-86
            complexed with mg
            1. region t:2-86 [153164] picpiclink
  9. Glycogen synthesis protein GlgS [109747] (1)
    link to SUPERFAMILY database - Superfamily
    1. Glycogen synthesis protein GlgS [109748] (1)
      1. Glycogen synthesis protein GlgS [109749]
        1. Escherichia coli [TaxId: 562] [109750] (1)
          SQ P26649
          1. 1rrz picpic
            Structural genomics target
            1. chain a [105086] picpiclink
  10. Alpha-hemoglobin stabilizing protein AHSP [109751] (1)
    the bundle twist angle is close to zero (small positive value); similar to the RRF alpha-helical bundle, scop_sf 55194
    link to SUPERFAMILY database - Superfamily
    1. Alpha-hemoglobin stabilizing protein AHSP [109752] (1)
      1. Alpha-hemoglobin stabilizing protein AHSP [109753]
        1. Human (Homo sapiens) [TaxId: 9606] [109754] (7)
          SQ Q9NZD4 1-94
          1. 1z8u picpicxrefxref
            automatically matched to d1w0ba_
            complexed with hem; mutant
            1. region a:2-91 [124724] picpiclink
          2. 1z8u picpicxrefxref
            automatically matched to d1w0ba_
            complexed with hem; mutant
            1. region c:2-91 [124726] picpiclink
          3. 1y01 picpicxref
            complexed with chk, hem, o2; mutant
            1. chain a [116276] picpiclink
          4. 1w0b picpic
            mutant
            1. chain a [108985] picpiclink
          5. 1w09 picpic
            1. chain a [108983] picpiclink
          6. 1xzy picpic
            1. chain a [116275] picpiclink
          7. 1w0a picpic
            1. chain a [108984] picpiclink
  11. PhoU-like [109755] (1)
    duplication: consists of two sequence each repeats adopting this fold
    link to SUPERFAMILY database - Superfamily
    1. PhoU-like [109756] (4)
      Pfam 01895
      1. PhoU homolog TM1734 [109757]
        1. Thermotoga maritima [TaxId: 2336] [109758] (1)
          SQ Q9X256
          1. 1sum picpic
            Structural genomics target
            complexed with ca, fe, ni, po3
            1. chain b [106025] picpiclink
      2. Phosphate transport system protein PhoU [116839]
        1. Aquifex aeolicus [TaxId: 63363] [116840] (2)
          SQ O67053 1-209
          1. 1t72 picpic
            Structural genomics target
            1. chain a [112284] picpiclink
            2. chain b [112285] picpiclink
            3. chain d [112286] picpiclink
            4. chain e [112287] picpiclink
            5. chain f [112288] picpiclink
            6. chain g [112289] picpiclink
          2. 1t8b picpic
            Structural genomics target
            1. chain a [112314] picpiclink
            2. chain b [112315] picpiclink
        2. Bacillus stearothermophilus [TaxId: 1422] [116841] (1)
          SQ Q818I8; 49% sequence identity
          1. 1xwm picpic
            Structural genomics target
            1. chain a [116132] picpiclink
      3. Hypothetical protein PH0236, N-terminal domain [140350]
        form dimers of dimers, similar to PhoU subunits and dimers, respectively
        1. Pyrococcus horikoshii [TaxId: 53953] [140351] (4)
          SQ O57975 9-107
          1. 1vct picpicxref
            complexed with cl, edo, na
            1. region a:9-107 [119986] picpiclink
          2. 2bko picpicxref
            automatically matched to 1VCT A:9-107
            complexed with ca, cl
            1. region a:9-107 [128702] picpiclink
          3. 2bkp picpicxref
            automatically matched to 1VCT A:9-107
            complexed with k
            1. region a:9-107 [128704] picpiclink
          4. 2bkn picpicxref
            automatically matched to 1VCT A:9-107
            complexed with cs
            1. region a:11-107 [128700] picpiclink
  12. XseB-like [116842] (1)
    helix-swapped homodimer
    link to SUPERFAMILY database - Superfamily
    1. XseB-like [116843] (1)
      Pfam 02609
      1. Exonuclease VII small subunit XseB [116844]
        1. Bordetella pertussis [TaxId: 520] [116845] (1)
          SQ Q7VV85 13-80
          1. 1vp7 picpic
            Structural genomics target
            1. chain a [113941] picpiclink
            2. chain b [113942] picpiclink
            3. chain c [113943] picpiclink
            4. chain d [113944] picpiclink
            5. chain e [113945] picpiclink
            6. chain f [113946] picpiclink
  13. MIT domain [116846] (1)
    link to SUPERFAMILY database - Superfamily
    1. MIT domain [116847] (3)
      Pfam 04212
      1. Hypothetical protein 1500032H18Rik [116848]
        1. Mouse (Mus musculus) [TaxId: 10090] [116849] (1)
          SQ Q8VDV8 6-87
          1. 1wfd picpic
            Structural genomics target
            1. chain a [114578] picpiclink
      2. Vacuolar protein sorting factor 4a (VPS4A, SKD2) [140352]
        1. Human (Homo sapiens) [TaxId: 9606] [140353] (2)
          SQ Q9UN37 1-77
          1. 2jq9 picpic
            automatically matched to d1yxra1
            1. region a:5-75 [148173] picpiclink
          2. 1yxr picpic
            1. region a:1-77 [124200] picpiclink
      3. Vacuolar sorting protein 4b (VPS4B, SKD1 protein) [140354]
        1. Human (Homo sapiens) [TaxId: 9606] [140355] (4)
          SQ O75351 1-104! SQ O75351 1-77
          1. 1wr0 picpic
            1. region a:5-81 [121183] picpiclink
          2. 2cpt picpic
            1. region a:8-111 [130706] picpiclink
          3. 2jqh picpic
            automatically matched to d1wr0a1
            1. region a:10-80 [148177] picpiclink
          4. 2jqk picpic
            automatically matched to d1wr0a1
            1. region a:10-80 [148179] picpiclink
  14. PPK N-terminal domain-like [140356] (1)
    link to SUPERFAMILY database - Superfamily
    1. PPK N-terminal domain-like [140357] (2)
      N-terminal part of Pfam 02503
      1. Polyphosphate kinase, PPK [140358]
        1. Escherichia coli [TaxId: 562] [140359] (4)
          SQ P0A7B1 2-106
          1. 1xdp picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1XDO A:2-106
            complexed with atp, mg
            1. region a:2-106 [121896] picpiclink
          2. 1xdp picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1XDO A:2-106
            complexed with atp, mg
            1. region b:2-106 [121900] picpiclink
          3. 1xdo picpicxrefxrefxrefxrefxrefxref
            1. region a:2-106 [121888] picpiclink
          4. 1xdo picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1XDO A:2-106
            1. region b:2-106 [121892] picpiclink
        2. Porphyromonas gingivalis [TaxId: 837] [140360] (2)
          SQ Q7MTR1 4-112
          1. 2o8r picpicxrefxrefxrefxrefxrefxref
            complexed with so4; mutant
            1. region a:4-112 [138933] picpiclink
          2. 2o8r picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2O8R A:4-112
            complexed with so4; mutant
            1. region b:11-112 [138937] picpiclink
  15. MIT domain-like [140361] (1)
    link to SUPERFAMILY database - Superfamily
    1. MIT domain [140362] (1)
      1. Nuclear receptor binding factor 2, NRBF2, N-terminal domain [140363]
        1. Mouse (Mus musculus) [TaxId: 10090] [140364] (1)
          SQ Q8VCQ3 4-86
          1. 2crb picpic
            mutant
            1. region a:8-90 [130737] picpiclink
  16. Efb C-domain-like [158366] (1)
    1. Efb C-domain-like [158367] (2)
      PfamB 008033
      1. Fibrinogen-binding protein Efb (Fib) [158368]
        1. Staphylococcus aureus [TaxId: 1280] [158369] (8)
          SQ A6QG59 101-165! SQ P68798 105-165! SQ P68799 101-165
          1. 2gom picpic
            1. region a:105-165 [147149] picpiclink
          2. 2gom picpic
            automatically matched to 2GOM A:105-165
            1. region b:106-165 [147150] picpiclink
          3. 3d5r picpicxrefxref
            mutant
            1. region c:11-75 [157405] picpiclink
          4. 3d5r picpicxrefxref
            automatically matched to 3D5R C:11-75
            mutant
            1. region d:11-75 [157406] picpiclink
          5. 2gox picpic
            mutant
            1. region b:101-165 [147151] picpiclink
          6. 2gox picpic
            automatically matched to 2GOX B:101-165
            mutant
            1. region d:101-165 [147152] picpiclink
          7. 3d5s picpicxrefxref
            mutant
            1. region c:11-75 [157409] picpiclink
          8. 3d5s picpicxrefxref
            automatically matched to 3D5S C:11-75
            mutant
            1. region d:11-75 [157410] picpiclink
      2. Uncharacterized protein SAV1155 [158370]
        1. Staphylococcus aureus [TaxId: 1280] [158371] (4)
          SQ Q99UV2 52-109
          1. 2noj picpicxrefxrefxrefxref
            mutant
            1. region b:52-109 [148325] picpiclink
          2. 2noj picpicxrefxrefxrefxref
            automatically matched to 2NOJ B:52-109
            mutant
            1. region d:52-109 [148327] picpiclink
          3. 2noj picpicxrefxrefxrefxref
            automatically matched to 2NOJ B:52-109
            mutant
            1. region f:52-109 [148329] picpiclink
          4. 2noj picpicxrefxrefxrefxref
            automatically matched to 2NOJ B:52-109
            mutant
            1. region h:52-109 [148331] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk