Structural Classification of Proteins
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Superfamily: Bacterial immunoglobulin/albumin-binding domains

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: immunoglobulin/albumin-binding domain-like [46996]
    3 helices; bundle, closed, left-handed twist; up-and-down; mirror topology to the spectrin-like fold
  4. Superfamily: Bacterial immunoglobulin/albumin-binding domains [46997]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Immunoglobulin-binding protein A modules [46998] (1)
    1. Immunoglobulin-binding protein A modules [46999]
      1. Staphylococcus aureus [TaxId: 1280] [47000] (14)
        1. 1lp1 picpic
          chain B is domain Z; chain A is a domain Z-based artificial affibody, Zspa-1
          complexed with mg, so4; mutant
          1. chain a [84664] picpiclink
          2. chain b [84665] picpiclink
        2. 1dee picpicxrefxrefxrefxref
          domain D
          1. chain g [16343] picpiclink
          2. chain h [16344] picpiclink
        3. 1fc2 picpicxrefxref
          domain B, incomplete
          complexed with fuc, gal, man, nag, so4
          1. chain c [16345] picpiclink
        4. 2jwd picpic
          automatically matched to d1ss1a_
          mutant
          1. region a:3-59 [148228] picpiclink
        5. 1edl picpic
          domain E
          1. chain a [16347] picpiclink
        6. 1edi picpic
          domain E
          1. chain a [16349] picpiclink
        7. 1edj picpic
          domain E
          1. chain a [16346] picpiclink
        8. 1edk picpic
          domain E
          1. chain a [16348] picpiclink
        9. 1h0t picpic
          chain A is domain Z; chain B is a domain Z-based artificial affibody, Zspa-1
          1. chain a [83440] picpiclink
          2. chain b [83441] picpiclink
        10. 2spz picpic
          domain Z
          mutant
          1. chain a [16352] picpiclink
        11. 1q2n picpic
          domain Z
          1. chain a [95631] picpiclink
        12. 1ss1 picpic
          domain B
          mutant
          1. chain a [98977] picpiclink
        13. 1bdc picpic
          domain B
          1. chain a [16350] picpiclink
        14. 1bdd picpic
          domain B
          1. chain a [16351] picpiclink
  2. GA module, an albumin-binding domain [47001] (3)
    Pfam 01468; also includes FIVAR module, Pfam 07554
    1. PAB [47002]
      1. Peptostreptococcus magnus [TaxId: 1260] [47003] (6)
        SQ Q51911 213-265
        1. 2j5y picpic
          automatically matched to d1gaba_
          1. region a:1-53 [147887] picpiclink
        2. 2j5y picpic
          automatically matched to d1gaba_
          1. region b:1-53 [147888] picpiclink
        3. 2vdb picpicxrefxref
          automatically matched to d1gaba_
          complexed with dka, nps
          1. region b:1-53 [152972] picpiclink
        4. 1tf0 picpicxref
          complexed with cit, dka
          1. chain b [106825] picpiclink
        5. 1gab picpic
          1. chain a [16353] picpiclink
        6. 1prb picpic
          1. chain a [16354] picpiclink
    2. IgG binding protein G [63496]
      1. Streptococcus sp., group G [TaxId: 1306] [63497] (2)
        1. 1gjs picpic
          1. chain a [60578] picpiclink
        2. 1gjt picpic
          1. chain a [60579] picpiclink
    3. Ebh protein [116850]
      1. Staphylococcus aureus [TaxId: 1280] [116851] (1)
        SQ Q8NWQ6 3912-4037
        1. 1xvh picpic
          Structural genomics target; one FIVAR and one GA modules together
          complexed with act, zn
          1. region a:3-72 [116084] picpiclink
          2. region a:73-128 [116085] picpiclink
          3. region b:3-72 [116086] picpiclink
          4. region b:73-128 [116087] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk