Structural Classification of Proteins
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Fold: GatB/YqeY motif

multihelical; consists of two different alpha-helical bundles (4-helical and 3-helical)

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: GatB/YqeY motif [89094]
    multihelical; consists of two different alpha-helical bundles (4-helical and 3-helical)

Superfamilies:

  1. GatB/YqeY motif [89095] (2)
    link to SUPERFAMILY database - Superfamily
    1. GatB/YqeY domain [89096] (1)
      1. Hypothetical protein YqeY [89097]
        1. Bacillus subtilis [TaxId: 1423] [89098] (1)
          1. 1ng6 picpic
            structural genomics
            1. chain a [85670] picpiclink
    2. GatB/GatE C-terminal domain-like [140757] (3)
      assigned to the same Pfam 02637 family as YeqY by the presence of a common sequence motif with an alpha-hairpin structure
      1. Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, C-terminal domain [140758]
        1. Staphylococcus aureus [TaxId: 1280] [140759] (5)
          SQ P64201 294-400
          1. 2f2a picpicxrefxrefxref
            automatically matched to 2DF4 B:294-400
            complexed with gln, mg
            1. region b:294-400 [132802] picpiclink
          2. 2g5h picpicxrefxrefxref
            automatically matched to 2DF4 B:294-400
            complexed with mg
            1. region b:294-400 [134659] picpiclink
          3. 2dqn picpicxrefxrefxref
            automatically matched to 2DF4 B:294-400
            complexed with asn, mg
            1. region b:294-400 [131640] picpiclink
          4. 2df4 picpicxrefxrefxref
            complexed with mn
            1. region b:294-400 [131446] picpiclink
          5. 2g5i picpicxrefxrefxref
            automatically matched to 2DF4 B:294-400
            complexed with adp, mg
            1. region b:294-400 [134663] picpiclink
      2. Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE, C-terminal domain [140760]
        1. Methanobacterium thermoautotrophicum [TaxId: 145262] [140761] (2)
          SQ O26803 445-503
          1. 2d6f picpicxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. region c:445-503 [131307] picpiclink
          2. 2d6f picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2D6F C:445-503
            complexed with zn
            1. region d:445-503 [131310] picpiclink
        2. Pyrococcus abyssi [TaxId: 29292] [140762] (2)
          SQ Q9V0U0 457-512
          1. 1zq1 picpicxrefxrefxrefxrefxrefxrefxrefxref
            complexed with asp
            1. region c:457-512 [125493] picpiclink
          2. 1zq1 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 1ZQ1 C:457-512
            complexed with asp
            1. region d:457-512 [125496] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk