Family: HCDH C-domain-like

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: 6-phosphogluconate dehydrogenase C-terminal domain-like [48178]
   multihelical; common core is formed around two long antiparallel helices related by (pseudo) twofold symmetry
4. Superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like [48179]
   N-terminal domain is Rossmann-fold with a family-specific C-terminal extension
   uperfamily
5. Family: HCDH C-domain-like [48187]

Protein Domains:

1. Short chain L-3-hydroxyacyl CoA dehydrogenase [48188]
   Dimer of 5-helical motifs; similar to duplicated motifs of 6PGD and KARI
   1. Human (Homo sapiens) [TaxId: 9606] [48189] (11)
      1. 1f0y
         complexed with caa, nad
         1. region a:204-302 [18793]
         2. region b:204-302 [18794]
      2. 3had
         1. region a:204-304 [18799]
         2. region b:204-302 [18800]
      3. 1m76
         complexed with caa, nad; mutant
         1. region a:204-302 [91216]
         2. region b:204-302 [91218]
      4. 2hdh
         complexed with nad
         1. region a:204-304 [18795]
         2. region b:204-302 [18796]
      5. 1f14
         mutant
         1. region a:204-302 [18801]
         2. region b:204-302 [18802]
      6. 1f17
         complexed with nai; mutant
         1. region a:204-304 [18797]
         2. region b:204-302 [18798]
      7. 1il0
         complexed with caa, nad; mutant
         1. region a:204-302 [66189]
         2. region b:204-302 [66191]
      8. 1f12
         complexed with 3hc; mutant
         1. region a:204-304 [18803]
         2. region b:204-302 [18804]
      9. 1m75
         complexed with caa, nad; mutant
         1. region a:204-302 [91212]
         2. region b:204-302 [91214]
      10. 1lsj
          complexed with nad; mutant
          1. region a:204-302 [91116]
          2. region b:204-302 [91118]
      11. 1lso
          complexed with nad; mutant
          1. region a:204-302 [91120]
          2. region b:204-302 [91122]
   2. Pig (Sus scrofa) [TaxId: 9823] [48190] (1)
      1. 3hdh
         complexed with nad
         1. region a:204-302 [18805]
         2. region b:204-302 [18806]
         3. region c:204-295 [18807]
2. Fatty oxidation complex alpha subunit, C-terminal domain [109949]
   duplication: contains two repeats of this domain
   1. Pseudomonas fragi [TaxId: 296] [109950] (4)
      SQ P28793
      1. 1wdk
         complexed with aco, hg, n8e, nad, zn
         1. region a:497-620 [109250]
         2. region a:621-715 [109251]
         3. region b:497-620 [109254]
         4. region b:621-715 [109255]
      2. 2d3t
         complexed with aco, nad
         1. region a:497-620 [131220]
         2. region a:621-715 [131221]
         3. region b:497-620 [131224]
         4. region b:621-715 [131225]
      3. 1wdl
         complexed with aco, n8e, nad
         1. region a:497-620 [109262]
         2. region a:621-715 [109263]
         3. region b:497-620 [109266]
         4. region b:621-715 [109267]
      4. 1wdm
         complexed with aco, nad, zn
         1. region a:497-620 [109274]
         2. region a:621-715 [109275]
         3. region b:497-620 [109278]
         4. region b:621-715 [109279]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk