Structural Classification of Proteins
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Protein: Fatty oxidation complex alpha subunit, middle domain from Pseudomonas fragi [TaxId: 296]

SQ P28793

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: 6-phosphogluconate dehydrogenase-like, N-terminal domain [51868]
    the beta-sheet is extended to 8 strands, order 32145678; strands 7 & 8 are antiparallel to the rest
    C-terminal domains also show some similarity
  6. Protein: Fatty oxidation complex alpha subunit, middle domain [110432]
  7. Species: Pseudomonas fragi [TaxId: 296] [110433]
    SQ P28793

PDB Entry Domains:

  1. 1wdk picpicxrefxrefxref
    complexed with aco, hg, n8e, nad, zn
    1. region a:311-496 [109252] picpiclink
    2. region b:311-496 [109256] picpiclink
  2. 2d3t picpicxrefxrefxrefxrefxrefxref
    complexed with aco, nad
    1. region a:311-496 [131222] picpiclink
    2. region b:311-496 [131226] picpiclink
  3. 1wdl picpicxrefxrefxref
    complexed with aco, n8e, nad
    1. region a:311-496 [109264] picpiclink
    2. region b:311-496 [109268] picpiclink
  4. 1wdm picpicxrefxrefxref
    complexed with aco, nad, zn
    1. region a:311-496 [109276] picpiclink
    2. region b:311-496 [109280] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk