Structural Classification of Proteins
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Superfamily: Chondroitin AC/alginate lyase

incomplete toroid
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: alpha/alpha toroid [48207]
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. Superfamily: Chondroitin AC/alginate lyase [48230]
    incomplete toroid
    link to SUPERFAMILY database - Superfamily

Families:

  1. Alginate lyase A1-III [48231] (1)
    1. Alginate lyase A1-III [48232]
      1. Sphingomonas sp., A1 [TaxId: 28214] [48233] (2) picpic
  2. Hyaluronate lyase-like catalytic, N-terminal domain [48234] (6)
    1. Chondroitinase AC [48235]
      Chondroitin AC lyase
      1. Pedobacter heparinus (Flavobacterium heparinum) [TaxId: 984] [48236] (5) picpic
      2. Arthrobacter aurescens [TaxId: 43663] [101368] (6) picpic
    2. Hyaluronate lyase [48237]
      1. Streptococcus pneumoniae [TaxId: 1313] [48238] (19) picpic
        SQ Q54873 287-1007
      2. Streptococcus agalactiae [TaxId: 1311] [69089] (3) picpic
        preceded by a small all-beta Ig-like domain
    3. Xanthan lyase [89111]
      1. Bacillus sp. gl1 [TaxId: 84635] [89112] (7) picpic
    4. Chondroitin ABC lyase I [89113]
      domain 2; preceded by a beta-domain of the galactose-binding domain-like fold
      1. Proteus vulgaris [TaxId: 585] [89114] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk