Structural Classification of Proteins
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Family: Ferritin

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Ferritin-like [47239]
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. Superfamily: Ferritin-like [47240]
    contains bimetal-ion centre in the middle of the bundle
    link to SUPERFAMILY database - Superfamily
  5. Family: Ferritin [47241]

Protein Domains:

  1. Rubrerythrin, N-terminal domain [47242]
    1. Desulfovibrio vulgaris [TaxId: 881] [47243] (10) picpic
      SQ P24931
    2. Archaeon Pyrococcus furiosus [TaxId: 2261] [101129] (3) picpic
  2. Hypothetical rubrerythrin [101130]
    1. Archaeon Sulfolobus tokodaii [TaxId: 111955] [101131] (1) picpic
  3. Hypothetical protein TM1526 [101132]
    1. Thermotoga maritima [TaxId: 2336] [101133] (1) picpic
  4. Bacterioferritin (cytochrome b1) [47244]
    binds heme between two subunits; 24-mer
    1. Escherichia coli [TaxId: 562] [47245] (20) picpic
    2. Rhodobacter capsulatus [TaxId: 1061] [69004] (1) picpic
    3. Desulfovibrio desulfuricans [TaxId: 876] [89025] (3) picpic
    4. Azotobacter vinelandii [TaxId: 354] [140431] (24) picpic
      SQ P22759 1-155
  5. Non-hem ferritin [63524]
    1. Escherichia coli, FtnA [TaxId: 562] [63525] (1) picpic
    2. Campylobacter jejuni [TaxId: 197] [69005] (1) picpic
    3. Thermotoga maritima [TaxId: 2336] [109783] (1) picpic
      SQ Q9X0L2
    4. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [140432] (24) picpic
      SQ O29424 3-164
  6. Dodecameric ferritin homolog [47250]
    1. Escherichia coli, Dps [TaxId: 562] [47251] (7) picpic
      ferritin homolog that binds to and protects DNA
    2. Listeria innocua [TaxId: 1642] [47252] (43) picpic
    3. Bacillus anthracis, Dlp-1 [TaxId: 1392] [74705] (1) picpic
    4. Bacillus anthracis, Dlp-2 [TaxId: 1392] [74706] (1) picpic
    5. Bacillus brevis, Dps [TaxId: 1393] [89026] (1) picpic
    6. Agrobacterium tumefaciens, Dps [TaxId: 358] [89027] (1) picpic
    7. Helicobacter pylori, Nap [TaxId: 210] [81743] (1) picpic
    8. Streptococcus suis [TaxId: 1307] [101134] (37) picpic
    9. Archaeon Halobacterium salinarum [TaxId: 2242] [101135] (5) picpic
      SQ Q9HMP7
    10. Mycobacterium smegmatis [TaxId: 1772] [109784] (20) picpic
      SQ Q8VP75
    11. Lactococcus lactis, DpsB [TaxId: 1358] [140433] (12) picpic
      SQ A2RJ45 3-173
    12. Lactococcus lactis, DpsA [TaxId: 1358] [140434] (4) picpic
      SQ A2RLG8 6-173
    13. Treponema pallidum, TpF1 [TaxId: 160] [140435] (16) picpic
      SQ P16665 26-176
  7. (Apo)ferritin [47246]
    1. Human (Homo sapiens), H chain [TaxId: 9606] [47247] (3) picpic
    2. Horse (Equus caballus), L chain [TaxId: 9796] [47248] (20) picpic
    3. Mouse (Mus musculus) [TaxId: 10090] [63526] (2) picpic
    4. Bullfrog (Rana catesbeiana) [TaxId: 8400] [47249] (7) picpic
    5. Human (Homo sapiens), mitocondial isoform [TaxId: 9606] [109785] (1) picpic
      SQ Q8N4E7
    6. Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111] [140436] (12) picpic
      SQ Q52SA8 1-200
    7. Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111] [140437] (12) picpic
      SQ Q8WQX3 21-211
  8. Hypothetical protein PF1190 [140438]
    significant sequence similarity to the half-ferritin family
    1. Archaeon Pyrococcus furiosus [TaxId: 2261] [140439] (2) picpic
      SQ Q8U1L6 9-166
  9. Nigerythrin, N-terminal domain [140440]
    1. Desulfovibrio vulgaris [TaxId: 881] [140441] (6) picpic
      SQ P30820 1-166
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk