Structural Classification of Proteins
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Fold: Acyl carrier protein-like

4 helices, bundle; helix 3 is shorter than others; up-and-down

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Acyl carrier protein-like [47335]
    4 helices, bundle; helix 3 is shorter than others; up-and-down

Superfamilies:

  1. ACP-like [47336] (3)
    link to SUPERFAMILY database - Superfamily
    1. Acyl-carrier protein (ACP) [47337] (9)
      1. Acyl carrier protein [47338]
        1. Escherichia coli [TaxId: 562] [47339] (23)
          SQ P02901
          1. 1t8k picpic
            complexed with imd, zn
            1. chain a [106666] picpiclink
          2. 1l0i picpic
            complexed with cac, na, psr, zn; mutant
            1. chain a [77643] picpiclink
          3. 2fae picpic
            automatically matched to d1acp__
            complexed with pm8, pse, zn
            1. region a:1-76 [133193] picpiclink
          4. 2fae picpic
            automatically matched to d1acp__
            complexed with pm8, pse, zn
            1. region b:1-76 [133194] picpiclink
          5. 2fad picpic
            automatically matched to d1acp__
            complexed with na, pm5, zn
            1. region a:1-76 [133191] picpiclink
          6. 2fad picpic
            automatically matched to d1acp__
            complexed with na, pm5, zn
            1. region b:1-76 [133192] picpiclink
          7. 2fac picpic
            automatically matched to d1acp__
            complexed with pm4, zn
            1. region a:1-76 [133189] picpiclink
          8. 2fac picpic
            automatically matched to d1acp__
            complexed with pm4, zn
            1. region b:1-76 [133190] picpiclink
          9. 3ejb picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmp
            1. region a:21-95 [158168] picpiclink
          10. 3ejb picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmp
            1. region c:21-93 [158169] picpiclink
          11. 3ejb picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmp
            1. region e:21-95 [158170] picpiclink
          12. 3ejb picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmp
            1. region g:21-93 [158171] picpiclink
          13. 1l0h picpic
            complexed with zn
            1. chain a [77642] picpiclink
          14. 3ejd picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmq
            1. region a:21-95 [158172] picpiclink
          15. 3ejd picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmq
            1. region c:21-93 [158173] picpiclink
          16. 3ejd picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmq
            1. region e:21-95 [158174] picpiclink
          17. 3ejd picpic
            automatically matched to d1acpa_
            complexed with cl, hem, htg, zmq
            1. region g:21-93 [158175] picpiclink
          18. 3eje picpic
            automatically matched to d1acpa_
            complexed with hem, htg, zmo
            1. region a:21-95 [158176] picpiclink
          19. 3eje picpic
            automatically matched to d1acpa_
            complexed with hem, htg, zmo
            1. region c:21-95 [158177] picpiclink
          20. 3eje picpic
            automatically matched to d1acpa_
            complexed with hem, htg, zmo
            1. region e:21-93 [158178] picpiclink
          21. 3eje picpic
            automatically matched to d1acpa_
            complexed with hem, htg, zmo
            1. region g:21-92 [158179] picpiclink
          22. 2fhs picpicxrefxref
            automatically matched to d1acp__
            1. region c:2-77 [133503] picpiclink
          23. 1acp picpic
            1. chain a [16931] picpiclink
        2. Bacillus subtilis [TaxId: 1423] [63534] (2)
          1. 1f80 picpicxref
            complexed with holoACP synthase
            complexed with na, pn2; mutant
            1. chain d [59686] picpiclink
            2. chain e [59687] picpiclink
            3. chain f [59688] picpiclink
          2. 1hy8 picpic
            1. chain a [65959] picpiclink
        3. Mycobacterium tuberculosis [TaxId: 1773] [74711] (1)
          1. 1klp picpic
            1. chain a [72721] picpiclink
        4. Thermotoga maritima [TaxId: 2336] [109793] (1)
          SQ Q9WY19
          1. 1vku picpic
            Structural genomics target
            1. chain a [108690] picpiclink
      2. Actinorhodin polyketide synthase acyl carrier protein, ACT ACP [47340]
        1. Streptomyces coelicolor, A3(2) [TaxId: 1902] [47341] (2)
          1. 2af8 picpic
            1. chain a [16933] picpiclink
          2. 1af8 picpic
            1. chain a [16932] picpiclink
      3. Frenolicin polyketide synthase acyl carrier protein, Fren ACP [89038]
        1. Streptomyces roseofulvus [TaxId: 33902] [89039] (1)
          1. 1or5 picpic
            1. chain a [87331] picpiclink
      4. Oxytetracycline polyketide synthase acyl carrier [101142]
        1. Streptomyces rimosus [TaxId: 1927] [101143] (1)
          1. 1nq4 picpic
            1. chain a [92045] picpiclink
      5. Type I fatty acid synthase ACP domain [89040]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [89041] (1)
          1. 2png picpic
            automatically matched to d1n8la_
            1. region a:1-76 [139742] picpiclink
      6. Hypothetical protein Atu2571 [158427]
        1. Agrobacterium tumefaciens [TaxId: 358] [158428] (1)
          SQ Q8UCC7 1-83
          1. 2jq4 picpic
            1. region a:1-83 [148170] picpiclink
    2. Peptidyl carrier domain [47342] (1)
      1. Peptidyl carrier protein (PCP), thioester domain [47343]
        1. Bacillus brevis [TaxId: 1393] [47344] (4)
          1. 2gdw picpic
            automatically matched to d1dnya_
            mutant
            1. region a:8-83 [135040] picpiclink
          2. 1dny picpic
            1. chain a [16934] picpiclink
          3. 2gdx picpic
            automatically matched to d1dnya_
            mutant
            1. region a:8-83 [135041] picpiclink
          4. 2gdy picpic
            automatically matched to d1dnya_
            mutant
            1. region a:8-83 [135042] picpiclink
    3. apo-D-alanyl carrier protein [63535] (1)
      1. apo-D-alanyl carrier protein [63536]
        1. Lactobacillus casei [TaxId: 1582] [63537] (2)
          1. 1dv5 picpic
            1. chain a [59139] picpiclink
          2. 1hqb picpic
            1. chain a [61128] picpiclink
  2. Colicin E immunity proteins [47345] (1)
    link to SUPERFAMILY database - Superfamily
    1. Colicin E immunity proteins [47346] (3)
      1. ImmE7 protein (Im7) [47347]
        1. Escherichia coli [TaxId: 562] [47348] (13)
          1. 1ayi picpic
            1. chain a [16940] picpiclink
          2. 2jb0 picpicxref
            automatically matched to d1mz8a_
            complexed with zn; mutant
            1. region a:3-87 [138246] picpiclink
          3. 1znv picpic
            automatically matched to d1mz8a_
            complexed with ni, po4; mutant
            1. region a:1-87 [125410] picpiclink
          4. 1znv picpic
            automatically matched to d1mz8a_
            complexed with ni, po4; mutant
            1. region c:1-87 [125411] picpiclink
          5. 1unk picpic
            1. chain a [16935] picpiclink
            2. chain b [16936] picpiclink
            3. chain c [16937] picpiclink
            4. chain d [16938] picpiclink
          6. 1mz8 picpicxref
            complexed with po4, zn
            1. chain a [79683] picpiclink
            2. chain c [79685] picpiclink
          7. 2jaz picpicxrefxref
            automatically matched to d1mz8a_
            complexed with po4, zn; mutant
            1. region a:2-87 [138244] picpiclink
          8. 2jaz picpicxrefxref
            automatically matched to d1mz8a_
            complexed with po4, zn; mutant
            1. region c:2-87 [138245] picpiclink
          9. 1cei picpic
            1. chain a [16939] picpiclink
          10. 2jbg picpicxrefxref
            automatically matched to d1mz8a_
            complexed with so4, zn; mutant
            1. region a:2-87 [138248] picpiclink
          11. 2jbg picpicxrefxref
            automatically matched to d1mz8a_
            complexed with so4, zn; mutant
            1. region c:2-87 [138249] picpiclink
          12. 1ujz picpicxref
            computationally designed interface with the colicin E7 DNase domain
            mutant
            1. chain a [99475] picpiclink
          13. 7cei picpicxref
            complexed with zn3
            1. chain a [16941] picpiclink
      2. ImmE8 (Im8) [47349]
        1. Escherichia coli [TaxId: 562] [47350] (2)
          1. 1gxh picpic
            1. chain a [70706] picpiclink
          2. 1gxg picpic
            1. chain a [70705] picpiclink
      3. ImmE9 protein (Im9) [47351]
        1. Escherichia coli [TaxId: 562] [47352] (14)
          1. 2vlq picpic
            automatically matched to d1e0ha_
            complexed with mla; mutant
            1. region a:4-84 [153298] picpiclink
          2. 2gyk picpicxrefxref
            complexed with po4, zn; mutant
            1. region a:3-85 [145276] picpiclink
          3. 2gyk picpicxrefxref
            automatically matched to 2GYK A:3-85
            complexed with po4, zn; mutant
            1. region e:3-85 [145277] picpiclink
          4. 2gzj picpicxrefxref
            automatically matched to 2GYK A:3-85
            complexed with po4, zn; mutant
            1. region a:3-85 [147204] picpiclink
          5. 2gzj picpicxrefxref
            automatically matched to 2GYK A:3-85
            complexed with po4, zn; mutant
            1. region e:3-85 [147206] picpiclink
          6. 2vln picpic
            automatically matched to d1e0ha_
            complexed with mla; mutant
            1. region a:6-85 [153295] picpiclink
          7. 1fr2 picpicxref
            complexed with po4, zn; mutant
            1. chain a [83256] picpiclink
          8. 1emv picpicxref
            complexed with po4
            1. chain a [16944] picpiclink
          9. 2vlo picpic
            automatically matched to d1e0ha_
            complexed with so4; mutant
            1. region a:4-86 [153296] picpiclink
          10. 2vlp picpic
            automatically matched to d1e0ha_
            complexed with mla; mutant
            1. region a:4-85 [153297] picpiclink
          11. 1bxi picpicxref
            complexed with ni, po4
            1. chain a [16945] picpiclink
          12. 1e0h picpic
            1. chain a [16947] picpiclink
          13. 1imp picpic
            1. chain a [16946] picpiclink
          14. 1imq picpic
            1. chain a [16948] picpiclink
  3. Retrovirus capsid dimerization domain-like [47353] (2)
    link to SUPERFAMILY database - Superfamily
    1. Retrovirus capsid protein C-terminal domain [47354] (4)
      1. EIAV capsid protein p26 [47355]
        1. Equine infectious anemia virus [TaxId: 11665] [47356] (2)
          1. 2eia picpicxref
            1. region a:148-222 [16949] picpiclink
            2. region b:148-220 [16950] picpiclink
          2. 1eia picpicxref
            1. region a:148-222 [16951] picpiclink
      2. HTLV-I capsid protein [47357]
        1. Human T-cell leukemia virus type 1 [TaxId: 11908] [47358] (1)
          1. 1qrj picpicxref
            1. region b:131-214 [16952] picpiclink
      3. HIV capsid protein, dimerisation domain [47359]
        1. Human immunodeficiency virus type 1 [TaxId: 11676] [47360] (7)
          1. 1a8o picpic
            mutant
            1. chain a [16953] picpiclink
          2. 2buo picpic
            automatically matched to d1a43__
            complexed with acy
            1. region a:148-219 [129224] picpiclink
          3. 1baj picpic
            extended at the C-terminus to include a 14-residue GAG p2 domain
            1. chain a [16954] picpiclink
          4. 1e6j picpicxrefxrefxrefxrefxref
            mutant
            1. region p:148-220 [16956] picpiclink
          5. 1a43 picpic
            1. chain a [16955] picpiclink
          6. 1aum picpic
            1. chain a [16957] picpiclink
          7. 3dik picpicxref
            automatically matched to d1e6jp1
            1. region a:148-219 [157751] picpiclink
      4. RSV capsid protein [47361]
        1. Rous sarcoma virus [TaxId: 11886] [47362] (2)
          1. 1d1d picpicxref
            1. region a:151-230 [16958] picpiclink
          2. 1eoq picpic
            C-terminal domain only
            1. chain a [16959] picpiclink
    2. SCAN domain [140466] (2)
      Pfam 02023; forms segment-swapped dimers compared to the retroviral capsid domain
      1. Zinc finger protein 42 [140467]
        1. Human (Homo sapiens) [TaxId: 9606] [140468] (2)
          SQ P28698 37-128
          1. 2fi2 picpic
            1. region a:37-128 [133509] picpiclink
          2. 2fi2 picpic
            automatically matched to 2FI2 A:37-128
            1. region b:37-128 [133510] picpiclink
      2. Zinc finger protein 174 [140469]
        1. Human (Homo sapiens) [TaxId: 9606] [140470] (2)
          SQ Q15697 37-132
          1. 1y7q picpic
            mutant
            1. region a:37-132 [122714] picpiclink
          2. 1y7q picpic
            automatically matched to 1Y7Q A:37-132
            mutant
            1. region b:37-132 [122715] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk