Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Mouse (Mus musculus), cluster 3.4 [TaxId: 10090]

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Immunoglobulin-like beta-sandwich [48725]
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands
4. Superfamily: Immunoglobulin [48726]
   uperfamily
5. Family: V set domains (antibody variable domain-like) [48727]
6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
7. Species: Mouse (Mus musculus), cluster 3.4 [TaxId: 10090] [88530]

PDB Entry Domains:

1. 1e6o
   part of Fab 13B5 against HIV-1 capsid protein p24
   1. region l:1-105 [20494]
2. 2fat
   automatically matched to 2FD6 L:1-106A
   1. region l:1-106a [147017]
3. 2fd6
   complexed with edo, etx, fuc, nag, pg4, pge, so4
   1. region l:1-106a [145157]
4. 2fbj
   part of Fab J539
   complexed with fuc, nag, zn
   1. region l:1-109 [19850]
5. 1e6j
   part of Fab 13B5 against HIV-1 capsid protein p24
   mutant
   1. region l:1-105 [20496]
6. 3bt2
   automatically matched to 2FD6 L:1-106A
   complexed with nag
   1. region l:1-106a [155545]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk