Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: KorB DNA-binding domain-like

contains HTH motif in the common core; also contains extra N-terminal helix and C-terminal subdomain of 4 helices (left-handed superhelix)
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: KorB DNA-binding domain-like [109709]
    contains HTH motif in the common core; also contains extra N-terminal helix and C-terminal subdomain of 4 helices (left-handed superhelix)
    link to SUPERFAMILY database - Superfamily

Families:

  1. KorB DNA-binding domain-like [109710] (2)
    [N-terminal half of Pfam 06613]
    1. Transcriptional repressor protein KorB DNA-binding domain [109711]
      1. Escherichia coli [TaxId: 562] [109712] (1) picpic
        SQ P07674 137-252 # structure of the C-terminal domain (297-358) is determined separately; scop_sp 69244
    2. Putative partitioning protein ParB/Spo0J [109713]
      1. Thermus thermophilus [TaxId: 274] [109714] (1) picpic
        SQ Q9LCY0 # Fragment
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk