Structural Classification of Proteins
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Protein: DNA polymerase beta from Human (Homo sapiens) [TaxId: 9606]

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: PsbU/PolX domain-like [81585]
    contains one classic and one pseudo HhH motifs
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA polymerase beta-like, second domain [81584]
    topological similarity to the N-terminal domain
  6. Protein: DNA polymerase beta [81579]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [81575]

PDB Entry Domains:

  1. 2fmp picpicxrefxref
    automatically matched to d1bpxa3
    complexed with dct, doc, mg, na
    1. region a:92-148 [133787] picpiclink
  2. 1tv9 picpicxrefxref
    complexed with mg, na, po4
    1. region a:92-148 [112676] picpiclink
  3. 2fms picpicxrefxref
    automatically matched to d1bpxa3
    complexed with cl, dup, mg, na
    1. region a:92-148 [133793] picpiclink
  4. 2i9g picpicxrefxref
    automatically matched to d1bpxa3
    complexed with bpi, cl, doc, na
    1. region a:92-148 [137127] picpiclink
  5. 2iso picpicxrefxref
    automatically matched to d1bpxa3
    complexed with cl, doc, gff, mg, na
    1. region a:92-148 [137607] picpiclink
  6. 2fmq picpicxrefxref
    automatically matched to d1bpxa3
    complexed with dup, mg, na
    1. region a:92-148 [133790] picpiclink
  7. 2pxi picpicxrefxref
    automatically matched to d1bpxa3
    complexed with cl, doc, gfh, mg, na
    1. region a:92-148 [149912] picpiclink
  8. 2isp picpicxrefxref
    automatically matched to d1bpxa3
    complexed with cl, doc, ggh, mg, na
    1. region a:92-148 [137610] picpiclink
  9. 1zjm picpicxrefxref
    automatically matched to d1bpxa3
    complexed with na
    1. region a:92-148 [125154] picpiclink
  10. 3c2m picpicxrefxref
    automatically matched to d1bpxa3
    complexed with edo, f2a, mn, na
    1. region a:92-148 [155883] picpiclink
  11. 3c2k picpicxrefxref
    automatically matched to d1bpxa3
    complexed with cl, dup, mn, na
    1. region a:92-148 [155877] picpiclink
  12. 1tva picpicxrefxref
    complexed with mg, na, po4
    1. region a:92-148 [112679] picpiclink
  13. 2p66 picpicxrefxref
    automatically matched to d1bpxa3
    complexed with 3dr, na, po4
    1. region a:92-148 [139507] picpiclink
  14. 1zjn picpicxrefxref
    automatically matched to d1bpxa3
    complexed with dgt, mg, na
    1. region a:92-148 [125157] picpiclink
  15. 1mq3 picpicxrefxref
    complexed with 8og, dcp, doc, mg, na
    1. region a:92-148 [79398] picpiclink
  16. 3c2l picpicxrefxref
    automatically matched to d1bpxa3
    complexed with f2a, mn, na
    1. region a:92-148 [155880] picpiclink
  17. 1mq2 picpicxrefxref
    complexed with 2da, 8og, a, na
    1. region a:92-148 [79395] picpiclink
  18. 1bpy picpicxrefxref
    protein/DNA complex; complexed with dct, doc, mg, na
    1. region a:92-148 [75819] picpiclink
  19. 9icw picpicxrefxref
    protein/DNA complex; complexed with na, so4
    1. region a:92-148 [76129] picpiclink
  20. 9ick picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76105] picpiclink
  21. 9icx picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76131] picpiclink
  22. 9icl picpicxrefxref
    protein/DNA complex; complexed with mn, na
    1. region a:92-148 [76107] picpiclink
  23. 7ici picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76008] picpiclink
  24. 9icm picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76109] picpiclink
  25. 7ick picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76012] picpiclink
  26. 7icq picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [76024] picpiclink
  27. 1zqp picpicxrefxref
    protein/DNA complex; complexed with k
    1. region a:92-148 [75965] picpiclink
  28. 7ice picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76000] picpiclink
  29. 8ico picpicxrefxref
    protein/DNA complex; complexed with azt, mn, na
    1. region a:92-148 [76062] picpiclink
  30. 9ico picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76113] picpiclink
  31. 1zqi picpicxrefxref
    protein/DNA complex; complexed with k
    1. region a:92-148 [75951] picpiclink
  32. 8ick picpicxrefxref
    protein/DNA complex; complexed with dtp, mn, na
    1. region a:92-148 [76054] picpiclink
  33. 7icn picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76018] picpiclink
  34. 9icv picpicxrefxref
    protein/DNA complex; complexed with dtp, na, zn
    1. region a:92-148 [76127] picpiclink
  35. 8icc picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76040] picpiclink
  36. 8ici picpicxrefxref
    protein/DNA complex; complexed with mg, na
    1. region a:92-148 [76050] picpiclink
  37. 7ich picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76006] picpiclink
  38. 7ict picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [76030] picpiclink
  39. 7icm picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76016] picpiclink
  40. 9icn picpicxrefxref
    protein/DNA complex; complexed with dct, mg, na
    1. region a:92-148 [76111] picpiclink
  41. 7icg picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76004] picpiclink
  42. 8ics picpicxrefxref
    protein/DNA complex; complexed with dcp, mn, na
    1. region a:92-148 [76070] picpiclink
  43. 9icu picpicxrefxref
    protein/DNA complex; complexed with mn, na, ttp
    1. region a:92-148 [76125] picpiclink
  44. 8icn picpicxrefxref
    protein/DNA complex; complexed with atp, mn, na
    1. region a:92-148 [76060] picpiclink
  45. 9ics picpicxrefxref
    protein/DNA complex; complexed with dct, mn, na
    1. region a:92-148 [76121] picpiclink
  46. 9icq picpicxrefxref
    protein/DNA complex; complexed with dtp, mn, na
    1. region a:92-148 [76117] picpiclink
  47. 8icp picpicxrefxref
    protein/DNA complex; complexed with dtp, mn, na
    1. region a:92-148 [76064] picpiclink
  48. 9icr picpicxrefxref
    protein/DNA complex; complexed with dcp, mn, na
    1. region a:92-148 [76119] picpiclink
  49. 9ict picpicxrefxref
    protein/DNA complex; complexed with dgt, mn, na
    1. region a:92-148 [76123] picpiclink
  50. 8icq picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76066] picpiclink
  51. 7icr picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [76026] picpiclink
  52. 7icp picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [76022] picpiclink
  53. 9icg picpicxrefxref
    protein/DNA complex; complexed with dcp, na, zn
    1. region a:92-148 [76097] picpiclink
  54. 9ich picpicxrefxref
    protein/DNA complex; complexed with dgt, na, zn
    1. region a:92-148 [76099] picpiclink
  55. 9icj picpicxrefxref
    protein/DNA complex; complexed with na, so4
    1. region a:92-148 [76103] picpiclink
  56. 8icr picpicxrefxref
    protein/DNA complex; complexed with dtp, mn, na
    1. region a:92-148 [76068] picpiclink
  57. 1zqk picpicxrefxref
    protein/DNA complex; complexed with k
    1. region a:92-148 [75955] picpiclink
  58. 8icm picpicxrefxref
    protein/DNA complex; complexed with na, so4
    1. region a:92-148 [76058] picpiclink
  59. 1zqa picpicxrefxref
    protein/DNA complex; complexed with k
    1. region a:92-148 [75935] picpiclink
  60. 8icx picpicxrefxref
    protein/DNA complex; complexed with mn, na, ttp
    1. region a:92-148 [76080] picpiclink
  61. 8ica picpicxrefxref
    protein/DNA complex; complexed with ca, dtp, na
    1. region a:92-148 [76036] picpiclink
  62. 8icz picpicxrefxref
    protein/DNA complex; complexed with na, so4
    1. region a:92-148 [76084] picpiclink
  63. 7ics picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76028] picpiclink
  64. 1zqf picpicxrefxref
    protein/DNA complex; complexed with cs
    1. region a:92-148 [75945] picpiclink
  65. 9icf picpicxrefxref
    protein/DNA complex; complexed with dtp, na, zn
    1. region a:92-148 [76095] picpiclink
  66. 9ica picpicxrefxref
    protein/DNA complex; complexed with mn, stp
    1. region a:92-148 [76087] picpiclink
  67. 1zqb picpicxrefxref
    protein/DNA complex; complexed with ba
    1. region a:92-148 [75937] picpiclink
  68. 8icb picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76038] picpiclink
  69. 7icf picpicxrefxref
    protein/DNA complex; complexed with cd, na
    1. region a:92-148 [76002] picpiclink
  70. 7icl picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76014] picpiclink
  71. 9icc picpicxrefxref
    protein/DNA complex; complexed with cr, dtp, na
    1. region a:92-148 [76091] picpiclink
  72. 9icb picpicxrefxref
    protein/DNA complex; complexed with co, dtp, na
    1. region a:92-148 [76089] picpiclink
  73. 8icg picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76046] picpiclink
  74. 8icf picpicxrefxref
    protein/DNA complex; complexed with dtp, na
    1. region a:92-148 [76044] picpiclink
  75. 1zqg picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [75947] picpiclink
  76. 1zqm picpicxrefxref
    protein/DNA complex; complexed with mn
    1. region a:92-148 [75959] picpiclink
  77. 8icl picpicxrefxref
    protein/DNA complex; complexed with dtp, na, ni
    1. region a:92-148 [76056] picpiclink
  78. 1zqo picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [75963] picpiclink
  79. 8icu picpicxrefxref
    protein/DNA complex; complexed with dad, mn, na
    1. region a:92-148 [76074] picpiclink
  80. 9icy picpicxrefxref
    protein/DNA complex; complexed with na, so4
    1. region a:92-148 [76133] picpiclink
  81. 1zqn picpicxrefxref
    protein/DNA complex; complexed with ba
    1. region a:92-148 [75961] picpiclink
  82. 8icv picpicxrefxref
    protein/DNA complex; complexed with dgt, mn, na
    1. region a:92-148 [76076] picpiclink
  83. 8icy picpicxrefxref
    protein/DNA complex; complexed with mn, na, ttp
    1. region a:92-148 [76082] picpiclink
  84. 8ict picpicxrefxref
    protein/DNA complex; complexed with dcp, mn, na
    1. region a:92-148 [76072] picpiclink
  85. 1zqs picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [75971] picpiclink
  86. 9icp picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76115] picpiclink
  87. 1zqc picpicxrefxref
    protein/DNA complex; complexed with ca
    1. region a:92-148 [75939] picpiclink
  88. 1bpx picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [75817] picpiclink
  89. 7ico picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [76020] picpiclink
  90. 9ici picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [76101] picpiclink
  91. 1bpz picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [75821] picpiclink
  92. 7icu picpicxrefxref
    protein/DNA complex; complexed with cd, na
    1. region a:92-148 [76032] picpiclink
  93. 1zql picpicxrefxref
    protein/DNA complex; complexed with mn
    1. region a:92-148 [75957] picpiclink
  94. 8icj picpicxrefxref
    protein/DNA complex; complexed with na, ttp
    1. region a:92-148 [76052] picpiclink
  95. 8ich picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76048] picpiclink
  96. 8ice picpicxrefxref
    protein/DNA complex; complexed with cd, dtp, na
    1. region a:92-148 [76042] picpiclink
  97. 7icv picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76034] picpiclink
  98. 1zqq picpicxrefxref
    protein/DNA complex; complexed with mn, na
    1. region a:92-148 [75967] picpiclink
  99. 1zqd picpicxrefxref
    protein/DNA complex; complexed with ca
    1. region a:92-148 [75941] picpiclink
  100. 8icw picpicxrefxref
    protein/DNA complex; complexed with mn, na, ttp
    1. region a:92-148 [76078] picpiclink
  101. 7icj picpicxrefxref
    protein/DNA complex; complexed with cu, na
    1. region a:92-148 [76010] picpiclink
  102. 1zqt picpicxrefxref
    protein/DNA complex; complexed with na, zn
    1. region a:92-148 [75973] picpiclink
  103. 1zqe picpicxrefxref
    protein/DNA complex; complexed with cr
    1. region a:92-148 [75943] picpiclink
  104. 1zqr picpicxrefxref
    protein/DNA complex; complexed with na, ni
    1. region a:92-148 [75969] picpiclink
  105. 9ice picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [76093] picpiclink
  106. 1zqj picpicxrefxref
    protein/DNA complex; complexed with ca
    1. region a:92-148 [75953] picpiclink
  107. 1zqh picpicxrefxref
    protein/DNA complex; complexed with na
    1. region a:92-148 [75949] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk