Structural Classification of Proteins
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Protein: DNA polymerase beta from Rat (Rattus norvegicus) [TaxId: 10116]

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: PsbU/PolX domain-like [81585]
    contains one classic and one pseudo HhH motifs
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA polymerase beta-like, second domain [81584]
    topological similarity to the N-terminal domain
  6. Protein: DNA polymerase beta [81579]
  7. Species: Rat (Rattus norvegicus) [TaxId: 10116] [81577]

PDB Entry Domains:

  1. 2van picpicxref
    automatically matched to d1bpba1
    mutant
    1. region a:91-148 [152826] picpiclink
  2. 1jn3 picpicxref
    mutant
    1. region a:91-148 [75864] picpiclink
  3. 1rpl picpicxref
    1. region a:95-148 [75933] picpiclink
  4. 1zqw picpicxref
    1. region a:91-148 [75979] picpiclink
  5. 1zqy picpicxref
    1. region a:91-148 [75983] picpiclink
  6. 1huz picpicxrefxref
    complexed with cr, mdn
    1. region a:92-148 [75850] picpiclink
    2. region b:92-148 [75852] picpiclink
  7. 1bpb picpicxref
    1. region a:91-148 [75811] picpiclink
  8. 1huo picpicxrefxref
    complexed with cr, tte
    1. region a:92-148 [75846] picpiclink
    2. region b:92-148 [75848] picpiclink
  9. 1zqu picpicxref
    1. region a:91-148 [75975] picpiclink
  10. 1zqx picpicxref
    1. region a:91-148 [75981] picpiclink
  11. 2bpc picpicxref
    complexed with mn
    1. region a:91-148 [75989] picpiclink
  12. 1zqz picpicxref
    complexed with mn
    1. region a:91-148 [75985] picpiclink
  13. 1nom picpicxref
    complexed with mn
    1. region a:91-148 [75929] picpiclink
  14. 1zqv picpicxref
    complexed with ca
    1. region a:91-148 [75977] picpiclink
  15. 2bpf picpicxrefxref
    protein/DNA complex; complexed with dct, mg
    1. region a:92-148 [75991] picpiclink
  16. 2bpg picpicxrefxref
    protein/DNA complex; complexed with dct, mg
    1. region a:92-148 [75993] picpiclink
    2. region b:92-148 [75995] picpiclink
  17. 1bpd picpicxrefxref
    complexed with po4
    1. region a:92-148 [75813] picpiclink
  18. 1bpe picpicxrefxref
    complexed with dtp
    1. region a:92-148 [75815] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk