Structural Classification of Proteins
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Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. Species: Escherichia coli [TaxId: 562] [158860]

PDB Entry Domains:

  1. 2v7n picpicxrefxrefxrefxref
    automatically matched to d1rhha1
    1. region a:1-148 [152724] picpiclink
  2. 2v7n picpicxrefxrefxrefxref
    automatically matched to d1rhha1
    1. region c:1-148 [152726] picpiclink
  3. 2v7n picpicxrefxrefxrefxref
    automatically matched to d1rhha1
    1. region e:1-148 [152728] picpiclink
  4. 2v7n picpicxrefxrefxrefxref
    automatically matched to d1rhha1
    1. region g:1-148 [152730] picpiclink
  5. 3det picpicxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region d:1-105 [157596] picpiclink
  6. 3det picpicxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region f:1-105 [157598] picpiclink
  7. 2r9h picpicxrefxref
    automatically matched to d1dqdl1
    complexed with cl; mutant
    1. region d:1-105 [151784] picpiclink
  8. 2r9h picpicxrefxref
    automatically matched to d1dqdl1
    complexed with cl; mutant
    1. region f:1-105 [151786] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk