Structural Classification of Proteins
home mail help root up expand collapse

Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Human (Homo sapiens), cluster 2 [TaxId: 9606]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. Species: Human (Homo sapiens), cluster 2 [TaxId: 9606] [88521]

PDB Entry Domains:

  1. 1eeq picpic
    VL dimer of Bence-Jones protein LEN
    mutant
    1. chain a [20544] picpiclink
    2. chain b [20545] picpiclink
  2. 1eeu picpic
    VL dimer of Bence-Jones protein LEN
    complexed with ipa; mutant
    1. chain a [20546] picpiclink
    2. chain b [20547] picpiclink
  3. 1qac picpic
    VL dimer of Bence-Jones protein LEN
    1. chain a [20549] picpiclink
    2. chain b [20550] picpiclink
  4. 1efq picpic
    VL dimer of Bence-Jones protein LEN
    complexed with ium, zn; mutant
    1. chain a [20548] picpiclink
  5. 1ek3 picpic
    VL dimer of Bence-Jones protein REC
    complexed with ca, cl
    1. chain a [59434] picpiclink
    2. chain b [59435] picpiclink
  6. 5lve picpic
    VL dimer of Bence-Jones protein LEN
    1. chain a [20551] picpiclink
  7. 3lve picpic
    VL dimer of Bence-Jones protein LEN
    complexed with zn; mutant
    1. chain a [20552] picpiclink
  8. 1lve picpic
    VL dimer of Bence-Jones protein LEN
    1. chain a [20553] picpiclink
  9. 4lve picpic
    VL dimer of Bence-Jones protein LEN
    mutant
    1. chain a [20554] picpiclink
    2. chain b [20555] picpiclink
  10. 2lve picpic
    VL dimer of Bence-Jones protein LEN
    1. chain a [20556] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk