Structural Classification of Proteins
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Family: C2 set domains

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: C2 set domains [49142]

Protein Domains:

  1. Vascular cell adhesion molecule-1 (VCAM-1) [49143]
    1. Human (Homo sapiens) [TaxId: 9606] [49144] (3)
      1. 1vca picpicxref
        D2
        1. region a:91-199 [21649] picpiclink
        2. region b:91-199 [21650] picpiclink
      2. 1vsc picpicxref
        D2
        mutant
        1. region a:91-196 [21651] picpiclink
        2. region b:91-196 [21652] picpiclink
      3. 1ij9 picpicxref
        D2
        1. region a:91-196 [62482] picpiclink
  2. Intercellular cell adhesion molecule-1 (ICAM-1) [49145]
    1. Human (Homo sapiens) [TaxId: 9606] [49146] (8)
      1. 1iam picpicxref
        D2
        complexed with nag; mutant
        1. region a:83-185 [21653] picpiclink
      2. 2oz4 picpicxrefxrefxref
        automatically matched to d1p53a1
        complexed with fuc, nag, so4, trs, zn
        1. region a:283-366 [149099] picpiclink
      3. 1ic1 picpicxref
        D2
        complexed with nag
        1. region a:83-190 [21654] picpiclink
        2. region b:83-190 [21655] picpiclink
      4. 1mq8 picpicxrefxref
        D2
        complexed with mg, nag; mutant
        1. region a:83-184 [79405] picpiclink
        2. region c:83-184 [79408] picpiclink
      5. 1z7z picpicxrefxrefxref
        automatically matched to d1ic1a1
        complexed with nag, ndg; mutant
        1. region i:83-187 [124680] picpiclink
      6. 1z7z picpicxrefxrefxref
        automatically matched to d1p53a1
        complexed with nag, ndg; mutant
        1. region i:283-366 [124681] picpiclink
      7. 1d3l picpicxref
        D2
        1. region a:83-185 [21656] picpiclink
      8. 1p53 picpicxref
        D4; putative family assignment as the region corresponding to C and C' strands is disordered
        complexed with nag
        1. region a:283-366 [94118] picpiclink
        2. region b:283-366 [94121] picpiclink
  3. Intercellular cell adhesion molecule-2 (ICAM-2) [49147]
    1. Human (Homo sapiens) [TaxId: 9606] [49148] (1)
      1. 1zxq picpicxref
        D2
        complexed with nag
        1. region a:87-192 [21657] picpiclink
  4. CD4 C2-set domains [49149]
    1. Human (Homo sapiens) [TaxId: 9606] [49150] (27)
      1. 2nxy picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with hez, nag, trs; mutant
        1. region b:1098-1181 [138746] picpiclink
      2. 2ny2 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with edo, hez, nag, suc; mutant
        1. region b:1098-1181 [138771] picpiclink
      3. 2ny3 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with nag, suc; mutant
        1. region b:1098-1181 [138777] picpiclink
      4. 2ny4 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with hez, nag, suc; mutant
        1. region b:1098-1181 [138783] picpiclink
      5. 2ny1 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with nag, suc; mutant
        1. region b:1098-1181 [138765] picpiclink
      6. 2nxz picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with edo, hez, ipa, nag, suc; mutant
        1. region b:1098-1181 [138752] picpiclink
      7. 2ny0 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with hez, nag; mutant
        1. region b:1098-1181 [138759] picpiclink
      8. 1cdy picpicxref
        domain 2
        mutant
        1. region a:98-178 [21658] picpiclink
      9. 2ny5 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with nag, suc; mutant
        1. region c:1098-1181 [138789] picpiclink
      10. 3cd4 picpicxref
        domain 2
        1. region a:98-178 [21659] picpiclink
      11. 1g9m picpicxrefxrefxrefxrefxrefxref
        domain 2
        complexed with fuc, ioh, nag; mutant
        1. region c:98-181 [21660] picpiclink
      12. 1rzj picpicxrefxrefxrefxrefxrefxref
        domain 2
        complexed with fuc, ioh, nag; mutant
        1. region c:98-181 [98199] picpiclink
      13. 1gc1 picpicxrefxrefxrefxrefxrefxref
        domain 2
        complexed with fuc, nag; mutant
        1. region c:98-181 [21663] picpiclink
      14. 1cdu picpicxref
        domain 2
        mutant
        1. region a:98-178 [21662] picpiclink
      15. 2ny6 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with nag, suc; mutant
        1. region b:1098-1181 [138795] picpiclink
      16. 1cdh picpicxref
        domain 2
        1. region a:98-178 [21661] picpiclink
      17. 1rzk picpicxrefxrefxrefxrefxrefxref
        domain 2
        complexed with nag; mutant
        1. region c:98-181 [98206] picpiclink
      18. 1g9n picpicxrefxrefxrefxrefxrefxref
        domain 2
        complexed with nag; mutant
        1. region c:98-181 [21665] picpiclink
      19. 2qad picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with edo, mla, nag
        1. region b:98-178 [150204] picpiclink
      20. 2qad picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with edo, mla, nag
        1. region f:98-178 [150208] picpiclink
      21. 1cdj picpicxref
        domain 2
        1. region a:98-178 [21664] picpiclink
      22. 1cdi picpicxref
        domain 2
        1. region a:98-178 [21666] picpiclink
      23. 2b4c picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1g9mc2
        complexed with fuc, nag, ndg, so4, xyl; mutant
        1. region c:98-175 [127821] picpiclink
      24. 1wio picpicxref
        domains 2 and 4
        1. region a:98-178 [21667] picpiclink
        2. region a:292-363 [21668] picpiclink
        3. region b:98-178 [21669] picpiclink
        4. region b:292-363 [21670] picpiclink
      25. 1jl4 picpicxrefxrefxrefxrefxref
        domain 2
        1. region d:98-178 [63162] picpiclink
      26. 1wip picpicxref
        domains 2 and 4
        1. region a:98-178 [21671] picpiclink
        2. region a:292-363 [21672] picpiclink
        3. region b:98-178 [21673] picpiclink
        4. region b:292-363 [21674] picpiclink
      27. 1wiq picpicxref
        domains 2 and 4
        1. region a:98-178 [21675] picpiclink
        2. region a:292-363 [21676] picpiclink
        3. region b:98-178 [21677] picpiclink
        4. region b:292-363 [21678] picpiclink
    2. Rat (Rattus rattus) [TaxId: 10117] [49151] (1)
      1. 1cid picpicxref
        domain 4
        complexed with so4
        1. region a:106-177 [21679] picpiclink
  5. CD2, second domain [49152]
    1. Human (Homo sapiens) [TaxId: 9606] [49153] (1)
      1. 1hnf picpicxref
        complexed with na, nag
        1. region a:105-182 [21680] picpiclink
    2. Rat (Rattus norvegicus) [TaxId: 10116] [49154] (1)
      1. 1hng picpicxref
        1. region a:100-176 [21681] picpiclink
        2. region b:100-176 [21682] picpiclink
  6. CD2-binding domain of CD58, second domain [49155]
    1. Human (Homo sapiens) [TaxId: 9606] [49156] (1)
      1. 1ccz picpicxref
        complexed with nag
        1. region a:94-171 [21683] picpiclink
  7. CD80, second domain [49157]
    a soluble form of b7-1
    1. Human (Homo sapiens) [TaxId: 9606] [49158] (2)
      1. 1dr9 picpicxref
        complexed with nag
        1. region a:106-200 [21684] picpiclink
      2. 1i8l picpicxrefxref
        complexed to ctla-4
        complexed with man, nag
        1. region a:106-199 [61971] picpiclink
        2. region b:106-199 [61973] picpiclink
  8. Granulocyte colony-stimulating factor (GC-SF) receptor, N-terminal domain [141010]
    1. Human (Homo sapiens) [TaxId: 9606] [141011] (1)
      SQ Q99062 26-119
      1. 2d9q picpicxrefxrefxref
        complexed with nag; mutant
        1. region b:3-96 [131347] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk