Structural Classification of Proteins
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Protein: p65 subunit of NF-kappa B (NFKB), dimerization domain from Mouse (Mus musculus) [TaxId: 10090]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: E set domains [81296]
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
    link to SUPERFAMILY database - Superfamily
  5. Family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain [81279]
    subgroup of the larger IPT/TIG domain family
  6. Protein: p65 subunit of NF-kappa B (NFKB), dimerization domain [49253]
  7. Species: Mouse (Mus musculus) [TaxId: 10090] [49254]

PDB Entry Domains:

  1. 1oy3 picpicxref
    1. chain b [87552] picpiclink
    2. chain c [87553] picpiclink
  2. 1bft picpic
    1. chain a [21934] picpiclink
    2. chain b [21935] picpiclink
  3. 1k3z picpicxref
    mutant
    1. chain a [77249] picpiclink
    2. chain b [77250] picpiclink
  4. 1ikn picpicxrefxrefxref
    1. region a:192-303 [21936] picpiclink
  5. 2ram picpicxref
    protein/DNA complex; complexed with 5iu, dtt
    1. region a:192-291 [21937] picpiclink
    2. region b:192-291 [21938] picpiclink
  6. 1lei picpicxrefxrefxref
    complexed with 5it
    1. region a:192-291 [84599] picpiclink
  7. 1ram picpicxref
    protein/DNA complex; complexed with dtt
    1. region a:192-291 [21939] picpiclink
    2. region b:192-291 [21940] picpiclink
  8. 1le5 picpicxrefxrefxref
    1. region a:192-291 [84583] picpiclink
    2. region e:192-291 [84587] picpiclink
  9. 1vkx picpicxrefxrefxref
    protein/DNA complex
    1. region a:192-291 [21941] picpiclink
  10. 1le9 picpicxrefxrefxref
    1. region a:192-291 [84591] picpiclink
    2. region e:192-291 [84595] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk