Structural Classification of Proteins
Fold: Streptavidin-like
barrel, closed; n=8, S=10; meander
Lineage:
Root:
scop
Class:
All beta proteins
[48724]
Fold:
Streptavidin-like
[50875]
barrel, closed; n=8, S=10; meander
Superfamilies:
Avidin/streptavidin
[50876] (1)
uperfamily
Avidin/streptavidin
[50877] (2)
Streptavidin [50878]
Streptomyces avidinii
[TaxId: 1895]
[50879] (122)
2f01
automatically matched to d1hy2a_
complexed with btn, btq, gol
region a:14-134
[132647]
2f01
automatically matched to d1hy2a_
complexed with btn, btq, gol
region b:16-134
[132648]
1luq
complexed with btn, gol, mpd; mutant
chain a
[91128]
chain b
[91129]
2gh7
automatically matched to d1hy2a_
complexed with btn, btq, gol
region a:14-134
[135173]
2gh7
automatically matched to d1hy2a_
complexed with btn, btq, gol
region b:16-134
[135174]
1swu
chain a
[27230]
chain b
[27231]
chain c
[27232]
chain d
[27233]
1rxj
complexed with bni; mutant
chain a
[98029]
chain b
[98030]
chain c
[98031]
chain d
[98032]
2g5l
automatically matched to d1hy2a_
complexed with gol, so4
region a:15-134
[134667]
2g5l
automatically matched to d1hy2a_
complexed with gol, so4
region b:16-134
[134668]
1mk5
complexed with btn
chain a
[91307]
chain b
[91308]
2izb
complexed with fmt, so4
chain a
[27250]
2izk
complexed with act, gur, so4
chain a
[27255]
2izh
complexed with btn
chain b
[27234]
chain d
[27235]
2izg
complexed with btn, so4
chain b
[27236]
chain d
[27237]
2izj
complexed with btn
chain a
[27257]
2rtm
complexed with imi, so4
chain a
[27283]
1df8
complexed with btn; mutant
chain a
[27248]
chain b
[27249]
2rtg
complexed with btn, cl, so4
chain b
[27243]
chain d
[27244]
2rtq
complexed with imi
chain b
[27239]
chain d
[27240]
2izl
complexed with imi
chain b
[27245]
chain d
[27246]
2rta
complexed with so4
chain a
[27238]
2rtj
complexed with fmt, gll
chain a
[27247]
2rti
complexed with fmt, gll
chain b
[27241]
chain d
[27242]
2rtf
complexed with btn, so4
chain b
[27253]
chain d
[27254]
1n9m
complexed with btn; mutant
chain a
[91734]
chain b
[91735]
chain c
[91736]
chain d
[91737]
2izf
complexed with btn, so4
chain b
[27262]
chain d
[27263]
2qcb
automatically matched to d1hy2a_
complexed with kys; mutant
region a:14-134
[150653]
1n9y
complexed with mpd; mutant
chain a
[91738]
chain b
[91739]
chain c
[91740]
chain d
[91741]
2rte
complexed with btn, so4
chain b
[27258]
chain d
[27259]
2izc
complexed with cl, na
chain b
[27251]
chain d
[27252]
2rtl
complexed with imi, so4
chain a
[27256]
2iza
complexed with fmt
chain a
[27260]
1vwg
complexed with ace, nh2
chain b
[27261]
2rtp
complexed with imi
chain b
[27272]
chain d
[27273]
2izi
complexed with btn
chain a
[27313]
1vwl
complexed with nh2, pno
chain b
[27264]
chain d
[27265]
1vwj
complexed with nh2, pno
chain b
[27268]
chain d
[27269]
1vwh
complexed with ace, nh2
chain b
[27274]
1vwk
complexed with nh2, pno
chain b
[27266]
chain d
[27267]
1vwr
complexed with nh2, pno
chain b
[27280]
2bc3
automatically matched to d1hy2a_
complexed with gol, so4
region a:14-135
[128279]
2bc3
automatically matched to d1hy2a_
complexed with gol, so4
region b:14-135
[128280]
2rtb
complexed with act, cl, na
chain b
[27270]
chain d
[27271]
1vwe
complexed with ace, nh2
chain b
[27275]
1sri
complexed with dmb
chain a
[27276]
chain b
[27277]
1vwi
complexed with nh2, pno
chain b
[27281]
chain d
[27282]
1rxk
complexed with bni; mutant
chain a
[98033]
chain b
[98034]
2rtc
complexed with so4
chain b
[27278]
chain d
[27279]
2rth
complexed with act, gll
chain b
[27286]
chain d
[27287]
2rtr
complexed with imi
chain b
[27284]
chain d
[27285]
1kl3
mutant
chain a
[72666]
chain b
[72667]
chain c
[72668]
chain d
[72669]
2rtd
complexed with btn
chain b
[27292]
chain d
[27293]
1kl4
mutant
chain a
[72670]
chain b
[72671]
chain c
[72672]
chain d
[72673]
1srg
complexed with mhb
chain a
[27303]
chain b
[27304]
1vwm
complexed with ace, nh2
chain b
[27294]
2ize
complexed with cl, fmt, na, nh4
chain b
[27295]
chain d
[27296]
2rto
complexed with imi
chain b
[27297]
chain d
[27298]
1nqm
complexed with btn; mutant
chain a
[86038]
chain b
[86039]
chain c
[86040]
chain d
[86041]
1rsu
chain b
[27308]
1slf
complexed with so4
chain b
[27299]
chain d
[27300]
1sre
complexed with hab
chain a
[27305]
chain b
[27306]
1vwo
complexed with ace, nh2
chain b
[27307]
1kl5
mutant
chain a
[72674]
chain b
[72675]
chain c
[72676]
chain d
[72677]
1hqq
complexed with miniprotein MP-2, chains E, F, G and H
mutant
chain a
[90655]
chain b
[90656]
chain c
[90657]
chain d
[90658]
1swh
mutant
chain a
[27288]
chain b
[27289]
chain c
[27290]
chain d
[27291]
2izd
complexed with cl, iod, nh4, so4
chain b
[27301]
chain d
[27302]
1mep
complexed with btn; mutant
chain a
[91252]
chain b
[91253]
chain c
[91254]
chain d
[91255]
1srj
complexed with nab
chain a
[27310]
chain b
[27311]
1vwq
complexed with nh2, pno
chain b
[27312]
1rst
chain b
[27309]
1nbx
complexed with mpd; mutant
chain a
[91775]
chain b
[91776]
chain c
[91777]
chain d
[91778]
1hxl
complexed with miniprotein MP-2, chains C and D
mutant
chain a
[83647]
chain b
[83648]
1vwp
complexed with ace, nh2
chain b
[27314]
1vwd
complexed with ace, nh2
chain b
[27321]
1hxz
complexed with miniprotein MP-2, chains C and D
chain a
[83649]
chain b
[83650]
1slg
chain b
[27315]
chain d
[27316]
1vwb
complexed with ace, nh2
chain b
[27326]
1swc
chain a
[27317]
chain b
[27318]
chain c
[27319]
chain d
[27320]
1vwc
complexed with ace, nh2
chain b
[27327]
2rtk
complexed with act, gll, so4
chain a
[27328]
1swb
chain a
[27329]
chain b
[27330]
chain c
[27331]
chain d
[27332]
1kff
mutant
chain a
[72408]
chain b
[72409]
chain c
[72410]
chain d
[72411]
1nc9
complexed with imi; mutant
chain a
[91798]
chain b
[91799]
chain c
[91800]
chain d
[91801]
1vwf
complexed with ace, nh2
chain b
[27337]
1swa
chain a
[27338]
chain b
[27339]
chain c
[27340]
chain d
[27341]
1vwa
chain b
[27344]
chain d
[27345]
1swq
mutant
chain a
[27333]
chain b
[27334]
chain c
[27335]
chain d
[27336]
1n43
complexed with btn; mutant
chain a
[91611]
chain b
[91612]
chain c
[91613]
chain d
[91614]
1lcz
complexed with bh7
chain a
[77884]
chain b
[77885]
1str
complexed with nh2
chain b
[27342]
chain d
[27343]
1swr
complexed with btn; mutant
chain a
[27354]
chain b
[27355]
chain c
[27356]
chain d
[27357]
1pts
chain a
[27350]
chain b
[27351]
1vwn
complexed with ace, nh2
chain b
[27358]
1srf
complexed with mtb
chain a
[27359]
chain b
[27360]
1lcw
complexed with shm
chain a
[77881]
chain b
[77882]
1swo
mutant
chain a
[27346]
chain b
[27347]
chain c
[27348]
chain d
[27349]
1ndj
complexed with btn; mutant
chain a
[91818]
chain b
[91819]
chain c
[91820]
chain d
[91821]
1n7y
mutant
chain a
[91699]
chain b
[91700]
chain c
[91701]
chain d
[91702]
1hy2
complexed with miniprotein MP-1, chains E, F, G and H
chain a
[83651]
chain b
[83652]
chain c
[83653]
chain d
[83654]
1sle
complexed with nh2
chain b
[27352]
chain d
[27353]
1swk
complexed with btn; mutant
chain a
[27365]
chain b
[27366]
chain c
[27367]
chain d
[27368]
1sts
complexed with nh2
chain b
[27369]
chain d
[27370]
1swe
complexed with btn
chain a
[27379]
chain b
[27380]
chain c
[27381]
chain d
[27382]
1lcv
complexed with snr
chain a
[77879]
chain b
[77880]
1swl
mutant
chain a
[27361]
chain b
[27362]
chain c
[27363]
chain d
[27364]
1sws
mutant
chain a
[27375]
chain b
[27376]
chain c
[27377]
chain d
[27378]
1swj
mutant
chain a
[27371]
chain b
[27372]
chain c
[27373]
chain d
[27374]
1srh
complexed with mob
chain a
[27399]
chain b
[27400]
1swd
complexed with btn
chain a
[27383]
chain b
[27384]
chain c
[27385]
chain d
[27386]
1swt
complexed with btn; mutant
chain a
[27389]
chain b
[27390]
2rtn
complexed with imi
chain b
[27387]
chain d
[27388]
1n4j
mutant
chain a
[91619]
1swn
complexed with btn; mutant
chain a
[27395]
chain b
[27396]
chain c
[27397]
chain d
[27398]
1i9h
complexed with bni
chain a
[62091]
chain b
[62092]
1swp
complexed with btn; mutant
chain a
[27402]
chain b
[27403]
chain c
[27404]
chain d
[27405]
1sld
complexed with nh2
chain b
[27401]
1stp
complexed with btn
chain a
[27406]
1rxh
complexed with bni; mutant
chain a
[98027]
chain b
[98028]
1moy
mutant with osteopontin hexapeptide insertion including rgd
chain a
[85039]
1mm9
mutant with insertion of fibronectin hexapeptide, including rgd
chain a
[85017]
1swg
circular permuted streptavidin e51/a46
complexed with btn; mutant
chain a
[27322]
chain b
[27323]
chain c
[27324]
chain d
[27325]
1swf
circular permuted streptavidin e51/a46
mutant
chain a
[27391]
chain b
[27392]
chain c
[27393]
chain d
[27394]
Avidin [50880]
Chicken (Gallus gallus)
[TaxId: 9031]
[50881] (16)
1nqn
mutant
chain a
[86042]
chain b
[86043]
1ij8
complexed with bni, nag
chain a
[62480]
chain b
[62481]
1ldo
complexed with nag, snr
chain a
[77904]
chain b
[77905]
2cam
mutant
chain a
[27407]
chain b
[27408]
2a8g
automatically matched to d1avdb_
complexed with gng, nag
region a:3-123
[126400]
2a8g
automatically matched to d1avdb_
complexed with gng, nag
region b:3-123
[126401]
1rav
chain a
[27409]
chain b
[27410]
1ldq
complexed with nag, shm
chain a
[77906]
chain b
[77907]
2a5b
automatically matched to d1avdb_
complexed with 8hg, nag
region a:3-123
[126168]
2a5b
automatically matched to d1avdb_
complexed with 8hg, nag
region b:3-123
[126169]
2a5c
automatically matched to d1avdb_
complexed with 8da, nag
region a:3-123
[126170]
2a5c
automatically matched to d1avdb_
complexed with 8da, nag
region b:3-123
[126171]
2avi
complexed with btn, nag
chain a
[27411]
chain b
[27412]
1lel
complexed with bh7, nag
chain a
[77909]
chain b
[77910]
1avd
complexed with btn, nag
chain a
[27413]
chain b
[27414]
1ave
complexed with nag
chain a
[27415]
chain b
[27416]
beta-Barrel protease inhibitors
[50882] (2)
uperfamily
Metalloprotease inhibitor
[50883] (2)
Metalloprotease inhibitor [50884]
Erwinia chrysanthemi
[TaxId: 556]
[50885] (1)
1smp
complexed with ca, zn
chain i
[27417]
Pseudomonas aeruginosa, aprin
[TaxId: 287]
[63813] (1)
1jiw
complexed with ca, zn
chain i
[63078]
Staphostatin
[101869] (2)
cysteine protease inhibitor; topology permutation: strand 3 is replaced with the N-terminal extra strand
Staphostatin A (SAV1910, SA1726) [101870]
Staphylococcus aureus
[TaxId: 1280]
[101871] (1)
1oh1
chain a
[92977]
Staphostatin B (SspC) [101872]
Staphylococcus aureus
[TaxId: 1280]
[101873] (5)
1nyc
complexed with cl, so4
chain a
[92336]
chain b
[92337]
1qwx
chain a
[96507]
chain b
[96508]
1pxv
complexed with staphopain
complexed with gai, so4; mutant
chain c
[95303]
chain d
[95304]
1y4h
automatically matched to d1nyca_
complexed with cl, so4
region c:1-109
[122617]
1y4h
automatically matched to d1nyca_
complexed with cl, so4
region d:1-109
[122618]
D-aminopeptidase, middle and C-terminal domains
[50886] (1)
uperfamily
D-aminopeptidase, middle and C-terminal domains
[50887] (1)
D-aminopeptidase, middle and C-terminal domains [50888]
duplication: both domains have this barrel fold
Ochrobactrum anthropi
[TaxId: 529]
[50889] (1)
1ei5
region a:336-417
[27418]
region a:418-520
[27419]
Quinohemoprotein amine dehydrogenase A chain, domain 3
[69298] (1)
uperfamily
Quinohemoprotein amine dehydrogenase A chain, domain 3
[69299] (2)
Quinohemoprotein amine dehydrogenase A chain, domain 3 [69300]
Paracoccus denitrificans
[TaxId: 266]
[69301] (2)
1pby
complexed with hem, tbu, trw
region a:166-273
[94421]
1jju
complexed with hem, na, tbu, trq
region a:166-273
[66778]
Pseudomonas putida
[TaxId: 303]
[69302] (2)
1jmx
complexed with hec, ni, trq
region a:163-281
[66905]
1jmz
complexed with hec, ni, pnd, trq
region a:163-281
[66912]
Dipeptidyl peptidase I (cathepsin C), exclusion domain
[75001] (1)
uperfamily
Dipeptidyl peptidase I (cathepsin C), exclusion domain
[75002] (2)
Dipeptidyl peptidase I (cathepsin C), exclusion domain [75003]
Human (Homo sapiens)
[TaxId: 9606]
[75004] (3)
2djf
automatically matched to d1k3ba_
complexed with acy, ch2, cl, gly, nag, phe
region a:1-118
[131541]
2djg
automatically matched to d1k3ba_
complexed with bma, cl, nag, so4
region a:1-118
[131542]
1k3b
complexed with cl, nag, so4
chain a
[72016]
Rat (Rattus norvegicus)
[TaxId: 10116]
[82160] (1)
1jqp
complexed with cl, nag, so4
region a:1-118
[77162]
YceI-like
[101874] (1)
uperfamily
YceI-like
[101875] (2)
Pfam 04264
Polyisoprenoid-binding protein TTHA0802 (TT1927B) [101876]
Thermus thermophilus
[TaxId: 274]
[101877] (1)
SQ
P83815
structural genomics
1wub
Structural genomics target
complexed with otp
chain a
[114891]
Lipid binding protein YceI [117267]
Escherichia coli
[TaxId: 562]
[117268] (1)
SQ
P0A8X2
1y0g
Structural genomics target
complexed with 8pp
chain a
[116299]
chain b
[116300]
chain c
[116301]
chain d
[116302]
Extracellular hemoglobin linker subunit, receptor domain
[141480] (1)
uperfamily
Extracellular hemoglobin linker subunit, receptor domain
[141481] (3)
Hemoglobin linker chain l1 [141482]
Common earthworm (Lumbricus terrestris)
[TaxId: 6398]
[141483] (1)
SQ
Q9GV76
127-240
2gtl
complexed with ca, cmo, hem, zn
region m:102-225
[135667]
Extracellular hemoglobin linker l3 subunit [141484]
Common earthworm (Lumbricus terrestris)
[TaxId: 6398]
[141485] (1)
SQ
Q2I742
119-240
2gtl
complexed with ca, cmo, hem, zn
region o:101-222
[135673]
Extracellular hemoglobin linker l2 subunit [141486]
Common earthworm (Lumbricus terrestris)
[TaxId: 6398]
[141487] (1)
SQ
Q2I743
139-299
2gtl
complexed with ca, cmo, hem, zn
region n:102-229
[135670]
YdhA-like
[141488] (1)
uperfamily
YdhA-like
[141489] (1)
Hypothetical protein YdhA [141490]
Escherichia coli
[TaxId: 562]
[141491] (1)
SQ
P28224
28-109
2f09
region a:1-82
[132660]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk