Structural Classification of Proteins
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Protein: Griffithsin from Red alga (Griffithsia) [TaxId: 35158]

SQ P84801 1-121

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-Prism I [51091]
    consists of 3 4-stranded sheets; strands are parallel to the 3-fold axis
    duplication: has internal pseudo threefold symmetry
  4. Superfamily: Mannose-binding lectins [51101]
    link to SUPERFAMILY database - Superfamily
  5. Family: Mannose-binding lectins [51102]
  6. Protein: Griffithsin [141569]
    single-chain subunits form a segment-swapped dimer
  7. Species: Red alga (Griffithsia) [TaxId: 35158] [141570]
    SQ P84801 1-121

PDB Entry Domains:

  1. 2gud picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, bma, edo, man, so4
    1. region a:1-121 [135732] picpiclink
  2. 2gud picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, bma, edo, man, so4
    1. region b:1-121 [135733] picpiclink
  3. 2gty picpic
    complexed with ace, edo, so4
    1. region a:1-121 [135713] picpiclink
  4. 2gty picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, so4
    1. region b:1-121 [135714] picpiclink
  5. 2hyr picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, glc, mg, so4
    1. region a:1-121 [136903] picpiclink
  6. 2hyr picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, glc, mg, so4
    1. region b:1-121 [136904] picpiclink
  7. 2guc picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, man, so4
    1. region a:1-121 [135730] picpiclink
  8. 2guc picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, man, so4
    1. region b:1-121 [135731] picpiclink
  9. 2gux picpic
    complexed with so4
    1. region a:1-121 [135753] picpiclink
  10. 2gue picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, nag, so4
    1. region a:1-121 [135734] picpiclink
  11. 2gue picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, edo, nag, so4
    1. region b:1-121 [135735] picpiclink
  12. 2hyq picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, man, so4
    1. region a:1-121 [136901] picpiclink
  13. 2hyq picpic
    automatically matched to 2GTY A:1-121
    complexed with ace, man, so4
    1. region b:1-121 [136902] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk