Structural Classification of Proteins
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Superfamily: Nucleoplasmin-like core domain

oligomerizes into a pentameric ring structure
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Nucleoplasmin-like core domain [69203]
    oligomerizes into a pentameric ring structure
    link to SUPERFAMILY database - Superfamily

Families:

  1. Nucleoplasmin-like core domain [69204] (3)
    1. Nucleoplasmin core [69205]
      1. Xenopus laevis [TaxId: 8355] [69206] (1)
        1. 1k5j picpic
          mutant
          1. chain a [68201] picpiclink
          2. chain b [68202] picpiclink
          3. chain c [68203] picpiclink
          4. chain d [68204] picpiclink
          5. chain e [68205] picpiclink
    2. Chromatin decondensation protein 1 (Crp1, Nlp) [89223]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [89224] (1)
        1. 1nlq picpic
          complexed with mg
          1. chain a [85853] picpiclink
          2. chain b [85854] picpiclink
          3. chain c [85855] picpiclink
          4. chain d [85856] picpiclink
          5. chain e [85857] picpiclink
    3. Nucleophosmin (NO38) [117086]
      1. African clawed frog (Xenopus laevis) [TaxId: 8355] [117087] (2)
        SQ P07222 16-122
        1. 1xe0 picpic
          1. chain a [115197] picpiclink
          2. chain b [115198] picpiclink
          3. chain c [115199] picpiclink
          4. chain d [115200] picpiclink
          5. chain e [115201] picpiclink
          6. chain f [115202] picpiclink
          7. chain g [115203] picpiclink
          8. chain h [115204] picpiclink
          9. chain i [115205] picpiclink
          10. chain j [115206] picpiclink
        2. 1xb9 picpic
          1. chain a [115066] picpiclink
          2. chain b [115067] picpiclink
          3. chain c [115068] picpiclink
          4. chain d [115069] picpiclink
          5. chain e [115070] picpiclink
          6. chain f [115071] picpiclink
          7. chain g [115072] picpiclink
          8. chain h [115073] picpiclink
          9. chain i [115074] picpiclink
          10. chain j [115075] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk