Structural Classification of Proteins
home mail help root up expand collapse

Family: Bromoviridae-like VP

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Positive stranded ssRNA viruses [88633]
    link to SUPERFAMILY database - Superfamily
  5. Family: Bromoviridae-like VP [88639]

Protein Domains:

  1. Cucumovirus coat protein [88640]
    1. CMV (Cucumber mosaic virus), strain fny [TaxId: 12305] [49646] (1)
      1. 1f15 picpic
        1. chain a [23320] picpiclink
        2. chain b [23321] picpiclink
        3. chain c [23322] picpiclink
    2. TAV (Tomato aspermy virus) [TaxId: 12315] [82012] (1)
      1. 1laj picpic
        complexed with mg, po4
        1. chain a [77865] picpiclink
        2. chain b [77866] picpiclink
        3. chain c [77867] picpiclink
    3. BMV (Brome mosaic virus) [TaxId: 12302] [74886] (31)
      1. 1yc6 picpic
        automatically matched to d1js9b_
        1. region 1:36-189 [122911] picpiclink
      2. 1yc6 picpic
        automatically matched to d1js9b_
        1. region 2:36-189 [122912] picpiclink
      3. 1yc6 picpic
        automatically matched to d1js9b_
        1. region 3:36-189 [122913] picpiclink
      4. 1yc6 picpic
        automatically matched to d1js9b_
        1. region 4:36-189 [122914] picpiclink
      5. 1yc6 picpic
        automatically matched to d1js9b_
        1. region a:36-189 [122915] picpiclink
      6. 1yc6 picpic
        automatically matched to d1js9b_
        1. region b:36-189 [122916] picpiclink
      7. 1yc6 picpic
        automatically matched to d1js9b_
        1. region c:36-189 [122917] picpiclink
      8. 1yc6 picpic
        automatically matched to d1js9b_
        1. region d:36-189 [122918] picpiclink
      9. 1yc6 picpic
        automatically matched to d1js9b_
        1. region e:36-189 [122919] picpiclink
      10. 1yc6 picpic
        automatically matched to d1js9b_
        1. region f:36-189 [122920] picpiclink
      11. 1yc6 picpic
        automatically matched to d1js9b_
        1. region g:36-189 [122921] picpiclink
      12. 1yc6 picpic
        automatically matched to d1js9b_
        1. region h:36-189 [122922] picpiclink
      13. 1yc6 picpic
        automatically matched to d1js9b_
        1. region i:36-189 [122923] picpiclink
      14. 1yc6 picpic
        automatically matched to d1js9b_
        1. region j:36-189 [122924] picpiclink
      15. 1yc6 picpic
        automatically matched to d1js9b_
        1. region k:36-189 [122925] picpiclink
      16. 1yc6 picpic
        automatically matched to d1js9b_
        1. region l:36-189 [122926] picpiclink
      17. 1yc6 picpic
        automatically matched to d1js9b_
        1. region m:36-189 [122927] picpiclink
      18. 1yc6 picpic
        automatically matched to d1js9b_
        1. region n:36-189 [122928] picpiclink
      19. 1yc6 picpic
        automatically matched to d1js9b_
        1. region o:36-189 [122929] picpiclink
      20. 1yc6 picpic
        automatically matched to d1js9b_
        1. region p:36-189 [122930] picpiclink
      21. 1yc6 picpic
        automatically matched to d1js9b_
        1. region q:36-189 [122931] picpiclink
      22. 1yc6 picpic
        automatically matched to d1js9b_
        1. region r:36-189 [122932] picpiclink
      23. 1yc6 picpic
        automatically matched to d1js9b_
        1. region s:36-189 [122933] picpiclink
      24. 1yc6 picpic
        automatically matched to d1js9b_
        1. region t:36-189 [122934] picpiclink
      25. 1yc6 picpic
        automatically matched to d1js9b_
        1. region u:36-189 [122935] picpiclink
      26. 1yc6 picpic
        automatically matched to d1js9b_
        1. region v:36-189 [122936] picpiclink
      27. 1yc6 picpic
        automatically matched to d1js9b_
        1. region w:36-189 [122937] picpiclink
      28. 1yc6 picpic
        automatically matched to d1js9b_
        1. region x:36-189 [122938] picpiclink
      29. 1yc6 picpic
        automatically matched to d1js9b_
        1. region y:36-189 [122939] picpiclink
      30. 1yc6 picpic
        automatically matched to d1js9b_
        1. region z:36-189 [122940] picpiclink
      31. 1js9 picpic
        complexed with egl, mg
        1. chain a [71840] picpiclink
        2. chain b [71841] picpiclink
        3. chain c [71842] picpiclink
    4. Cowpea chlorotic mottle virus [TaxId: 12303] [49636] (1)
      1. 1cwp picpic
        protein/RNA complex
        1. chain a [23305] picpiclink
        2. chain b [23306] picpiclink
        3. chain c [23307] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk