Structural Classification of Proteins
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Family: Microviridae-like VP

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: ssDNA viruses [88645]
    link to SUPERFAMILY database - Superfamily
  5. Family: Microviridae-like VP [49612]

Protein Domains:

  1. Microvirus capsid proteins [49613]
    include capsid protein F and spike protein G
    1. Bacteriophage phi-X174 [TaxId: 10847] [49614] (4)
      1. 2bpa picpic
        1. chain 1 [23272] picpiclink
        2. chain 2 [23273] picpiclink
      2. 1al0 picpicxref
        1. chain f [23274] picpiclink
        2. chain g [23275] picpiclink
      3. 1cd3 picpicxref
        1. chain f [23276] picpiclink
        2. chain g [23277] picpiclink
      4. 1kvp picpic
        chimera with a fragment 1-71 of vp1 from spiroplasma virus SPV4
        1. chain a [23278] picpiclink
    2. Bacteriophage G4 [TaxId: 10843] [49615] (1)
      1. 1gff picpic
        mutant
        1. chain 1 [23279] picpiclink
        2. chain 2 [23280] picpiclink
    3. Bacteriophage alpha3 [TaxId: 10849] [82008] (2)
      1. 1m06 picpic
        complexed with c
        1. chain f [78326] picpiclink
        2. chain g [78327] picpiclink
      2. 1rb8 picpic
        complexed with c
        1. chain f [97279] picpiclink
        2. chain g [97280] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk